Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_P06
(872 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomy... 88 2e-18
SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism... 81 2e-16
SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyc... 66 5e-12
SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde reduc... 50 4e-07
SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual 29 0.86
SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces pomb... 28 1.5
SPBP22H7.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 27 2.6
SPCC965.06 |||potassium channel subunit |Schizosaccharomyces pom... 27 4.6
SPAC186.01 |||DIPSY family|Schizosaccharomyces pombe|chr 1|||Manual 27 4.6
SPAC3C7.06c |pit1||serine/threonine protein kinase Pit1|Schizosa... 26 8.1
SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase Rqh1|... 22 9.1
>SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 321
Score = 87.8 bits (208), Expect = 2e-18
Identities = 53/163 (32%), Positives = 80/163 (49%), Gaps = 2/163 (1%)
Frame = +1
Query: 382 LRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIXKAIKNKIDDG 561
L DG+ +P + LGT P T V+TA+ GYR ID A IYGNE + IK + G
Sbjct: 18 LADGSKIPGLGLGTWRSEPNQTKNAVKTALQYGYRHIDAAAIYGNEDEVGDGIK---ESG 74
Query: 562 TVRRDELFIMGKLWSTFHRTDLVETACRISLADLGWEFFDLFLI--PIRCX*RKXKFYTE 735
R+D +++ KLW H + V A +L DL ++ D +LI P+ + KF +
Sbjct: 75 VPRKD-IWVTSKLWCNAHAPEAVPKALEKTLKDLKLDYLDEYLIHWPVSFKTGEDKFPKD 133
Query: 736 DXSVIQYSXFDYXDXWFGXXNLXXKGLAKNXGVSNFNSTXIQK 864
+ Y + W L G ++ G+SNFN T +++
Sbjct: 134 KDGNLIYEKNPIEETWKAMEKLLETGKVRHIGLSNFNDTNLER 176
>SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 325
Score = 81.4 bits (192), Expect = 2e-16
Identities = 53/167 (31%), Positives = 76/167 (45%), Gaps = 2/167 (1%)
Frame = +1
Query: 370 ATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIXKAIKNK 549
A L +G +P I LGT T V A+ GYR IDTA+IYGNEK I + I+
Sbjct: 13 AYFTLPNGDKIPSIGLGTWRSGKDETKNAVCAALKAGYRHIDTAHIYGNEKEIGEGIR-- 70
Query: 550 IDDGTVRRDELFIMGKLWSTFHRTDLVETACRISLADLGWEFFDLFLI--PIRCX*RKXK 723
+ V R ++++ KLW HR LV A +L DL E+ D +LI P +
Sbjct: 71 --ESGVPRTDIWVTSKLWCNAHRAGLVPLALEKTLQDLNLEYIDAYLIHWPFALLSGPEE 128
Query: 724 FYTEDXSVIQYSXFDYXDXWFGXXNLXXKGLAKNXGVSNFNSTXIQK 864
+ + Y + W L G + G+SNFN+ + +
Sbjct: 129 LPRNEKGELIYEDVPIEETWQAMEELLETGKVRYIGISNFNNEYLDR 175
>SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 283
Score = 66.5 bits (155), Expect = 5e-12
Identities = 44/115 (38%), Positives = 61/115 (53%), Gaps = 2/115 (1%)
Frame = +1
Query: 355 SVKEVATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIXK 534
S E T+ L +G +P I G +L +V A+D GYR IDTA +YGNE + K
Sbjct: 4 SQTESTTVTLTNGMVIPRIGFGAFMLKYNECYGLVTQALDSGYRHIDTAAVYGNEDICGK 63
Query: 535 AIKNKIDDGTVRRDELFIMGKL--WSTFHRTDLVETACRISLADLGWEFFDLFLI 693
AI + + V+R ++F+ KL S ++ T A R SL LG + DLFLI
Sbjct: 64 AIVDWCEKNNVKRTDIFLTSKLANCSDYYST---RAAIRSSLHHLG-TYIDLFLI 114
>SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde
reductase AKR3C2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 284
Score = 50.0 bits (114), Expect = 4e-07
Identities = 44/161 (27%), Positives = 69/161 (42%), Gaps = 6/161 (3%)
Frame = +1
Query: 400 MPVIALGTALLPP------RLTTEIVETAIDMGYRAIDTAYIYGNEKLIXKAIKNKIDDG 561
+P +GTAL R + V+ A+ G+ ID A +YGNE+ + A+K +
Sbjct: 12 VPAYGVGTALFKKEKGEINRTIVDSVKNALAAGFIHIDCAEVYGNEEEVGVALK----EA 67
Query: 562 TVRRDELFIMGKLWSTFHRTDLVETACRISLADLGWEFFDLFLIPIRCX*RKXKFYTEDX 741
V R +LFI K+ H D + A SL LG ++ DL+L+ FY +
Sbjct: 68 NVPRSKLFITSKV---MHNVDNIPEALNESLRKLGTDYLDLYLLH-----SPIPFYEKKI 119
Query: 742 SVIQYSXFDYXDXWFGXXNLXXKGLAKNXGVSNFNSTXIQK 864
+ + W GL + GVSNF +++
Sbjct: 120 PI--------SEGWKAMETALGTGLVHSVGVSNFRIPDLEE 152
>SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual
Length = 815
Score = 29.1 bits (62), Expect = 0.86
Identities = 18/55 (32%), Positives = 32/55 (58%)
Frame = -1
Query: 344 LASFSSAILVLYCSSVRSPVSRFCLPLSKRRCPLPGDSILTEVIFLNTKKHNMNQ 180
++SFS+ + +LY + +S VS +PL + L G S+LT +I++ K+ Q
Sbjct: 49 ISSFSTHLNILYFNLSKSMVSFAQVPL-EEYLNLLGHSLLTSIIYVMLKRRFYEQ 102
>SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 2386
Score = 28.3 bits (60), Expect = 1.5
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -1
Query: 401 MNVPSRSFKVAT-SFTLPFSLASFSSAILVLYCSSVRSPVSRFCL 270
MN+ F + T ++TLPF + + + A++V +S V+ CL
Sbjct: 726 MNISEGDFLIRTQAYTLPFLVLTKNKALIVRIAELSQSDVATLCL 770
>SPBP22H7.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 255
Score = 27.5 bits (58), Expect = 2.6
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -1
Query: 395 VPSRSFKVATSFTLPFSLASFSSAILV 315
+PS+ F++ T F PF+ FS +++V
Sbjct: 177 LPSQRFEIVTGFLSPFNKLYFSKSLIV 203
>SPCC965.06 |||potassium channel subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 344
Score = 26.6 bits (56), Expect = 4.6
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Frame = +1
Query: 445 TTEIVETAIDMGYRAIDTAYIYGN---EKLIXKAIK 543
T ++ A D+G DTA IY N E ++ KAIK
Sbjct: 46 TKNCLKQAWDLGINTFDTAEIYSNGNSETVMGKAIK 81
>SPAC186.01 |||DIPSY family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 26.6 bits (56), Expect = 4.6
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -1
Query: 473 SIAVSTISVVNRGGSKAVPKAMTGMNVPSRSFKVA--TSFTLPFSLASFSS 327
SI STI+ GS+ +TG N P + +V T+ T +L S SS
Sbjct: 99 SIITSTITTTITSGSQLYTTTITGQNTPVDTVEVVIPTAGTFTTTLTSGSS 149
>SPAC3C7.06c |pit1||serine/threonine protein kinase
Pit1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 650
Score = 25.8 bits (54), Expect = 8.1
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = -1
Query: 362 FTLPFSLASFSSAILVLYCSSVRSPVSRFCLPLSKRRCPLPGDSILTE 219
F+ P++LA S +L + P + CL L R P D++ ++
Sbjct: 301 FSPPWNLAFASMLSQLLKWDPAKRPTAEMCLDLEFCRVSAPADAVASK 348
>SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase
Rqh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1328
Score = 22.2 bits (45), Expect(2) = 9.1
Identities = 9/35 (25%), Positives = 20/35 (57%)
Frame = -1
Query: 479 PISIAVSTISVVNRGGSKAVPKAMTGMNVPSRSFK 375
P+++ + +V + S VP+++ ++ PSR K
Sbjct: 131 PLAVNTADTTVSHSTSSSNVPRSLNKIHDPSRFIK 165
Score = 21.4 bits (43), Expect(2) = 9.1
Identities = 8/30 (26%), Positives = 17/30 (56%)
Frame = -1
Query: 641 QAVSTRSVRWNVLHNLPIMKSSSRLTVPSS 552
Q+ S +++W + I+K ++ VP+S
Sbjct: 75 QSSSLNNLKWKDVEGPNILKPIKKIAVPAS 104
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,802,878
Number of Sequences: 5004
Number of extensions: 52272
Number of successful extensions: 197
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 194
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 436477420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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