Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_P06
         (872 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF519508-1|ABP73571.1|  250|Anopheles gambiae APL2 protein.            24   7.0  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   9.2  

>EF519508-1|ABP73571.1|  250|Anopheles gambiae APL2 protein.
          Length = 250

 Score = 23.8 bits (49), Expect = 7.0
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = +1

Query: 415 LGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIXKAIKNKI 552
           L    +PP L   +   AI  G R +++    G+E ++ K   NK+
Sbjct: 149 LSVVRIPPNLRQLV---AIGNGIRTVESTATNGSELILLKLAHNKL 191


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +3

Query: 666 LGVFRPLPHPNPMXLKEXKVLYRRXISDP 752
           + V  P   P+P+ +KE    ++R ++DP
Sbjct: 833 VAVLMPRLIPHPLLIKEDARCHQRYLADP 861


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 710,587
Number of Sequences: 2352
Number of extensions: 13018
Number of successful extensions: 59
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93439926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)