Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_P05
(886 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole... 269 7e-71
UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n... 250 3e-65
UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;... 234 3e-60
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 214 2e-54
UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6 ... 205 1e-51
UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia... 146 5e-34
UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1; E... 136 9e-31
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 126 7e-28
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 125 2e-27
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 124 2e-27
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 123 5e-27
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 123 7e-27
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 122 9e-27
UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;... 122 1e-26
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 122 2e-26
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 122 2e-26
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 121 3e-26
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 120 4e-26
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 120 5e-26
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 119 9e-26
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 119 9e-26
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 119 9e-26
UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1; ... 118 2e-25
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 118 2e-25
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 118 2e-25
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 118 2e-25
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 118 2e-25
UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4; Ascomy... 118 2e-25
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 118 3e-25
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 118 3e-25
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 117 3e-25
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 117 3e-25
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 117 5e-25
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 117 5e-25
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 117 5e-25
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 117 5e-25
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 117 5e-25
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 116 6e-25
UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2; C... 116 6e-25
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 116 8e-25
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 116 8e-25
UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase... 116 1e-24
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 116 1e-24
UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA... 115 1e-24
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 115 1e-24
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 114 2e-24
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 114 3e-24
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 114 3e-24
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 114 3e-24
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 113 4e-24
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 113 4e-24
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 113 6e-24
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 113 7e-24
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 113 7e-24
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 113 7e-24
UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=... 113 7e-24
UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1; S... 113 7e-24
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 112 1e-23
UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=... 112 1e-23
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 112 1e-23
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 112 1e-23
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 112 1e-23
UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p; ... 111 2e-23
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 111 2e-23
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 111 2e-23
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 111 2e-23
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 111 2e-23
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 111 2e-23
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 111 2e-23
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 111 2e-23
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 111 2e-23
UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=... 111 2e-23
UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lambl... 111 2e-23
UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=3... 111 2e-23
UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-depend... 111 3e-23
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 111 3e-23
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 110 4e-23
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 110 4e-23
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 110 4e-23
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 110 4e-23
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 110 4e-23
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 110 4e-23
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 110 4e-23
UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;... 110 5e-23
UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep... 110 5e-23
UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila melanogaster... 110 5e-23
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 110 5e-23
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 109 7e-23
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 109 7e-23
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 109 7e-23
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 109 7e-23
UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;... 109 7e-23
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 109 9e-23
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 109 9e-23
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 109 1e-22
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 109 1e-22
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 109 1e-22
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 109 1e-22
UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13; ... 109 1e-22
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 108 2e-22
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 108 2e-22
UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2; ... 108 2e-22
UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 108 2e-22
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 108 2e-22
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 107 3e-22
UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein; ... 107 3e-22
UniRef50_A4BBH5 Cluster: Probable ATP-dependent RNA helicase; n=... 107 3e-22
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 107 3e-22
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 107 3e-22
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 107 4e-22
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 107 4e-22
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 107 4e-22
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 107 4e-22
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 107 4e-22
UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1; U... 107 4e-22
UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL p... 107 5e-22
UniRef50_A5FH33 Cluster: DEAD/DEAH box helicase domain protein; ... 107 5e-22
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 106 6e-22
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 106 6e-22
UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n... 106 6e-22
UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1; ... 106 6e-22
UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2; ... 106 6e-22
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 106 6e-22
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 106 9e-22
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 106 9e-22
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 106 9e-22
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 106 9e-22
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 106 9e-22
UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p - ... 106 9e-22
UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3; ... 106 9e-22
UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 106 9e-22
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 105 1e-21
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 105 1e-21
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 105 1e-21
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 105 1e-21
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 105 1e-21
UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila pseudoobscu... 105 1e-21
UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein; ... 105 1e-21
UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;... 105 1e-21
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 105 2e-21
UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subuni... 105 2e-21
UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;... 105 2e-21
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 105 2e-21
UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box A... 104 3e-21
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 104 3e-21
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 104 3e-21
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 104 3e-21
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 104 3e-21
UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 103 5e-21
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 103 5e-21
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n... 103 5e-21
UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 103 5e-21
UniRef50_Q9FNM7 Cluster: DEAD-box ATP-dependent RNA helicase 26;... 103 5e-21
UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;... 103 5e-21
UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable A... 103 6e-21
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 103 6e-21
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 103 6e-21
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 103 6e-21
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 103 6e-21
UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein; ... 103 6e-21
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 103 6e-21
UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX... 103 6e-21
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 103 8e-21
UniRef50_Q21EB3 Cluster: DEAD/DEAH box helicase-like protein; n=... 103 8e-21
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 103 8e-21
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 103 8e-21
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 102 1e-20
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 102 1e-20
UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep: V... 102 1e-20
UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82; ... 102 1e-20
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 102 1e-20
UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13; ... 102 1e-20
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 102 1e-20
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 102 1e-20
UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6; Plasmodiu... 102 1e-20
UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1; ... 102 1e-20
UniRef50_Q13206 Cluster: Probable ATP-dependent RNA helicase DDX... 102 1e-20
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 101 2e-20
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 101 2e-20
UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein; ... 101 2e-20
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 101 2e-20
UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 101 2e-20
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 101 2e-20
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 101 2e-20
UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA he... 101 3e-20
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 101 3e-20
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 101 3e-20
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 101 3e-20
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 101 3e-20
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 101 3e-20
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 101 3e-20
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 101 3e-20
UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase P... 101 3e-20
UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein; ... 101 3e-20
UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 101 3e-20
UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=... 100 4e-20
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 100 4e-20
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 100 4e-20
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 100 4e-20
UniRef50_A1IIT5 Cluster: RNA helicase; n=1; Neobenedenia girella... 100 4e-20
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 100 4e-20
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 100 6e-20
UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 100 6e-20
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 100 6e-20
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 100 6e-20
UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6; Bacter... 100 6e-20
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 100 6e-20
UniRef50_Q7JQN4 Cluster: LD15481p; n=7; Endopterygota|Rep: LD154... 100 6e-20
UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyosteli... 100 6e-20
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 100 6e-20
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 99 7e-20
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 99 7e-20
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 99 7e-20
UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein; ... 99 7e-20
UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;... 99 7e-20
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 100 1e-19
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 100 1e-19
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 100 1e-19
UniRef50_Q80Y44 Cluster: Probable ATP-dependent RNA helicase DDX... 100 1e-19
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 99 1e-19
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 99 1e-19
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 99 1e-19
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 99 1e-19
UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 99 1e-19
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 99 2e-19
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 99 2e-19
UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicas... 99 2e-19
UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein; ... 99 2e-19
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 99 2e-19
UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqf... 99 2e-19
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 98 2e-19
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 98 2e-19
UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2; ... 98 2e-19
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 98 2e-19
UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Re... 98 2e-19
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E... 98 2e-19
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 98 2e-19
UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 98 2e-19
UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23; ... 98 2e-19
UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family pr... 98 3e-19
UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia francis... 98 3e-19
UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein; ... 98 3e-19
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 97 4e-19
UniRef50_A4SWL3 Cluster: DEAD/DEAH box helicase domain protein; ... 97 4e-19
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 97 4e-19
UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA heli... 97 4e-19
UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 97 4e-19
UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, wh... 97 4e-19
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 97 5e-19
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 97 5e-19
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 97 5e-19
UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55; Eu... 97 5e-19
UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1; Ent... 97 7e-19
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 97 7e-19
UniRef50_Q6C024 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 97 7e-19
UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4; Clostr... 96 9e-19
UniRef50_Q5FLW7 Cluster: RNA helicase; n=9; Lactobacillus|Rep: R... 96 9e-19
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 96 9e-19
UniRef50_A4RK80 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 96 9e-19
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;... 96 9e-19
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 96 1e-18
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 96 1e-18
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 96 1e-18
UniRef50_Q9VX34 Cluster: CG5800-PA; n=2; Sophophora|Rep: CG5800-... 96 1e-18
UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog... 96 1e-18
UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;... 96 1e-18
UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;... 96 1e-18
UniRef50_Q9NY93 Cluster: Probable ATP-dependent RNA helicase DDX... 96 1e-18
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 95 2e-18
UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase; ... 95 2e-18
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 95 2e-18
UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;... 95 2e-18
UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1; Ent... 95 2e-18
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 95 2e-18
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 95 2e-18
UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep: ... 95 2e-18
UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 varia... 95 2e-18
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 95 2e-18
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 95 3e-18
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 95 3e-18
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 95 3e-18
UniRef50_Q6BFH3 Cluster: Nucleolar RNA helicase II, putative; n=... 95 3e-18
UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 95 3e-18
UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;... 95 3e-18
UniRef50_Q0UZ59 Cluster: ATP-dependent RNA helicase DBP9; n=1; P... 95 3e-18
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 94 4e-18
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 94 4e-18
UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3; Aconoidasi... 94 4e-18
UniRef50_P75172 Cluster: Probable ATP-dependent RNA helicase MG4... 94 4e-18
UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1; S... 94 4e-18
UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=... 94 4e-18
UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable A... 94 5e-18
UniRef50_Q1U8H0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 94 5e-18
UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma ... 94 5e-18
UniRef50_Q6KZC2 Cluster: ATP-dependent RNA helicase; n=1; Picrop... 94 5e-18
UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 94 5e-18
UniRef50_Q9NQI0 Cluster: Probable ATP-dependent RNA helicase DDX... 94 5e-18
UniRef50_UPI00015B6103 Cluster: PREDICTED: similar to CG8611-PB;... 93 6e-18
UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;... 93 6e-18
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 93 6e-18
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 93 6e-18
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 93 6e-18
UniRef50_Q1LSH5 Cluster: DEAD/DEAH box helicase-like protein pre... 93 6e-18
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 93 6e-18
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent... 93 6e-18
UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Re... 93 6e-18
UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, wh... 93 6e-18
UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100, w... 93 6e-18
UniRef50_Q96XQ7 Cluster: 337aa long hypothetical ATP-dependent R... 93 6e-18
UniRef50_A3H9E9 Cluster: DEAD/DEAH box helicase-like; n=1; Caldi... 93 6e-18
UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;... 93 6e-18
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 93 9e-18
UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1; ... 93 9e-18
UniRef50_Q4UA43 Cluster: DEAD-family helicase, putative; n=3; Pi... 93 9e-18
UniRef50_A2DP01 Cluster: DEAD/DEAH box helicase family protein; ... 93 9e-18
UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3; F... 93 9e-18
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 93 1e-17
UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2; Strept... 93 1e-17
UniRef50_Q3LWF0 Cluster: ATP-dependent RNA helicase; n=1; Bigelo... 93 1e-17
UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa... 93 1e-17
UniRef50_A2G6R5 Cluster: DEAD/DEAH box helicase family protein; ... 93 1e-17
UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein; ... 93 1e-17
UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146, w... 93 1e-17
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 93 1e-17
UniRef50_Q1DMX8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 93 1e-17
UniRef50_A5DPU0 Cluster: ATP-dependent RNA helicase MAK5; n=1; P... 93 1e-17
UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5; T... 92 1e-17
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 92 1e-17
UniRef50_A6FEC9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 92 1e-17
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 92 1e-17
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 92 1e-17
UniRef50_A7APE7 Cluster: DEAD/DEAH box helicase domain containin... 92 1e-17
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 92 1e-17
UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box A... 92 2e-17
UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome sh... 92 2e-17
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 92 2e-17
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 92 2e-17
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 92 2e-17
UniRef50_Q2BGG8 Cluster: RNA helicase DbpA; n=1; Neptuniibacter ... 92 2e-17
UniRef50_Q8IL14 Cluster: Helicase, truncated, putative; n=3; Euk... 92 2e-17
UniRef50_Q86IZ9 Cluster: Similar to Rattus norvegicus (Rat). ROK... 92 2e-17
UniRef50_Q5D9C4 Cluster: SJCHGC09528 protein; n=1; Schistosoma j... 92 2e-17
UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y chromosome-rela... 92 2e-17
UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3; P... 92 2e-17
UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;... 92 2e-17
UniRef50_Q4S1T3 Cluster: Chromosome undetermined SCAF14764, whol... 91 3e-17
UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep... 91 3e-17
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 91 3e-17
UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1; Salini... 91 3e-17
UniRef50_O54116 Cluster: Probable DEAD-box RNA helicase; n=10; S... 91 3e-17
UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocyst... 91 3e-17
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 91 3e-17
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-... 91 3e-17
UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2; ... 91 3e-17
UniRef50_Q1JSQ3 Cluster: Dead-box helicase, putative; n=1; Toxop... 91 3e-17
UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 91 3e-17
UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX... 91 3e-17
UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX... 91 3e-17
UniRef50_UPI00015B617E Cluster: PREDICTED: hypothetical protein;... 91 3e-17
UniRef50_Q5QVE4 Cluster: ATP-dependent RNA helicase; n=2; Idioma... 91 3e-17
UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2; Frank... 91 3e-17
UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3; Actino... 91 3e-17
UniRef50_Q7QWI2 Cluster: GLP_538_22840_21176; n=2; Giardia intes... 91 3e-17
UniRef50_Q5CX71 Cluster: Hca4p helicase DBP4 (Helicase CA4). EIF... 91 3e-17
UniRef50_Q5BYH3 Cluster: SJCHGC05414 protein; n=1; Schistosoma j... 91 3e-17
UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=... 91 3e-17
UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Duge... 91 3e-17
UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46... 91 3e-17
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 91 3e-17
UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5; T... 91 5e-17
UniRef50_UPI0000D573C1 Cluster: PREDICTED: similar to CG8611-PA,... 90 6e-17
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 90 6e-17
UniRef50_Q2Z064 Cluster: Probable ATP-dependent RNA helicase; n=... 90 6e-17
UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3; Eumet... 90 6e-17
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 90 6e-17
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 90 8e-17
UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=... 90 8e-17
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 90 8e-17
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 90 8e-17
UniRef50_Q03GJ4 Cluster: Superfamily II DNA and RNA helicase; n=... 90 8e-17
UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2; ... 90 8e-17
UniRef50_Q6K7R9 Cluster: DEAD-box ATP-dependent RNA helicase 48;... 90 8e-17
UniRef50_O74393 Cluster: ATP-dependent RNA helicase mak5; n=1; S... 90 8e-17
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 90 8e-17
UniRef50_Q8NHQ9 Cluster: ATP-dependent RNA helicase DDX55; n=86;... 90 8e-17
UniRef50_Q2H2J1 Cluster: ATP-dependent RNA helicase DBP4; n=14; ... 90 8e-17
UniRef50_Q07886 Cluster: Probable ATP-dependent RNA helicase Dbp... 90 8e-17
UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2; Ent... 89 1e-16
UniRef50_UPI00004992E6 Cluster: DEAD/DEAH box helicase; n=3; Ent... 89 1e-16
UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1; Ent... 89 1e-16
UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1; A... 89 1e-16
UniRef50_A5EYB1 Cluster: ATP-dependent rna helicase Rhl; n=2; Ga... 89 1e-16
UniRef50_A3I404 Cluster: Putative uncharacterized protein; n=1; ... 89 1e-16
UniRef50_A0UX17 Cluster: DEAD/DEAH box helicase-like; n=5; Clost... 89 1e-16
UniRef50_Q4QC38 Cluster: RNA helicase, putative; n=7; Trypanosom... 89 1e-16
UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD (Asp-... 89 1e-16
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 89 1e-16
UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 89 1e-16
UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1; ... 89 1e-16
UniRef50_Q7QUN8 Cluster: GLP_47_37459_39102; n=1; Giardia lambli... 89 1e-16
UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4; ... 89 1e-16
UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein; ... 89 1e-16
UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1; ... 89 1e-16
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 89 1e-16
UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A... 89 1e-16
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 89 2e-16
UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 89 2e-16
UniRef50_Q1WSN6 Cluster: ATP-dependent RNA helicase; n=1; Lactob... 89 2e-16
UniRef50_Q9N478 Cluster: Putative uncharacterized protein; n=2; ... 89 2e-16
UniRef50_Q93382 Cluster: Putative uncharacterized protein; n=2; ... 89 2e-16
UniRef50_A2EAD4 Cluster: DEAD/DEAH box helicase family protein; ... 89 2e-16
UniRef50_A2DGJ7 Cluster: DEAD/DEAH box helicase family protein; ... 89 2e-16
UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82; E... 89 2e-16
UniRef50_Q8SR63 Cluster: ATP-dependent rRNA helicase RRP3; n=1; ... 89 2e-16
UniRef50_Q8EJQ5 Cluster: ATP-dependent RNA helicase rhlB; n=62; ... 89 2e-16
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 89 2e-16
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 89 2e-16
UniRef50_A5DU73 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 89 2e-16
UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111... 89 2e-16
UniRef50_Q5KN79 Cluster: ATP-dependent RNA helicase DBP4; n=1; F... 89 2e-16
UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1; Lentis... 88 2e-16
UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein; ... 88 2e-16
UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Sl... 88 2e-16
UniRef50_Q4N7J8 Cluster: DEAD box RNA helicase, putative; n=2; T... 88 2e-16
UniRef50_A3FQ46 Cluster: U5 snRNP 100 kD protein, putative; n=2;... 88 2e-16
UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, wh... 88 2e-16
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 88 2e-16
UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70; ... 88 2e-16
UniRef50_Q9NVP1 Cluster: ATP-dependent RNA helicase DDX18; n=24;... 88 2e-16
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ... 88 2e-16
UniRef50_UPI00015A4B44 Cluster: DEAD (Asp-Glu-Ala-Asp) box polyp... 88 3e-16
UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3; P... 88 3e-16
UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=... 88 3e-16
UniRef50_Q7RYZ7 Cluster: ATP-dependent RNA helicase dbp-8; n=15;... 88 3e-16
UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4; Pr... 88 3e-16
UniRef50_Q92AT6 Cluster: Lin1833 protein; n=13; Listeria|Rep: Li... 87 4e-16
UniRef50_A3TJG3 Cluster: ATP-dependent RNA helicase; n=5; Actino... 87 4e-16
UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2; Cryptospori... 87 4e-16
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 87 4e-16
UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 87 4e-16
UniRef50_A7SJ72 Cluster: Predicted protein; n=1; Nematostella ve... 87 4e-16
UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1; ... 87 4e-16
UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9; Eu... 87 4e-16
UniRef50_A5DC85 Cluster: ATP-dependent RNA helicase DBP9; n=4; S... 87 4e-16
UniRef50_Q8SR01 Cluster: ATP-dependent RNA helicase DBP4; n=1; E... 87 4e-16
UniRef50_UPI0000E49031 Cluster: PREDICTED: similar to DEAD/DEXH ... 87 6e-16
UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=... 87 6e-16
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 87 6e-16
UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1; ... 87 6e-16
UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa... 87 6e-16
UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=... 87 6e-16
UniRef50_A7RHS2 Cluster: Predicted protein; n=1; Nematostella ve... 87 6e-16
UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5; ... 87 6e-16
UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX... 87 6e-16
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 87 6e-16
UniRef50_UPI0001509DC1 Cluster: DEAD/DEAH box helicase family pr... 87 7e-16
UniRef50_Q6NHC6 Cluster: Putative RNA helicase; n=2; Corynebacte... 87 7e-16
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 87 7e-16
UniRef50_A6Q863 Cluster: ATP-dependent RNA helicase; n=1; Sulfur... 87 7e-16
UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia ... 87 7e-16
UniRef50_Q4UG97 Cluster: ATP-dependent RNA helicase, putative; n... 87 7e-16
UniRef50_Q16YP8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 87 7e-16
UniRef50_A4IBK1 Cluster: ATP-dependent RNA helicase, putative; n... 87 7e-16
UniRef50_Q59H21 Cluster: ATP-dependent RNA helicase ROK1 isoform... 87 7e-16
UniRef50_Q97WT0 Cluster: ATP-dependent RNA helicase; n=4; Sulfol... 87 7e-16
UniRef50_P25808 Cluster: ATP-dependent rRNA helicase SPB4; n=10;... 87 7e-16
UniRef50_Q9FZ92 Cluster: Putative DEAD-box ATP-dependent RNA hel... 87 7e-16
UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1; F... 87 7e-16
UniRef50_Q9Y2R4 Cluster: Probable ATP-dependent RNA helicase DDX... 87 7e-16
UniRef50_Q9H8H2 Cluster: Probable ATP-dependent RNA helicase DDX... 87 7e-16
UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2; ... 86 1e-15
UniRef50_Q836U7 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 86 1e-15
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 86 1e-15
UniRef50_Q0S0C7 Cluster: ATP-dependent RNA helicase; n=5; Actino... 86 1e-15
UniRef50_A3JG19 Cluster: ATP-dependent RNA helicase; n=1; Marino... 86 1e-15
UniRef50_Q013Q9 Cluster: DEAD/DEAH box helicase, putative; n=7; ... 86 1e-15
UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus lu... 86 1e-15
UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein; ... 86 1e-15
UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase con... 86 1e-15
UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102, w... 86 1e-15
UniRef50_Q2GSC7 Cluster: Putative uncharacterized protein; n=6; ... 86 1e-15
UniRef50_A5DUB2 Cluster: ATP-dependent RNA helicase MAK5; n=5; S... 86 1e-15
UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2; F... 86 1e-15
UniRef50_Q4P5U4 Cluster: ATP-dependent RNA helicase DBP4; n=1; U... 86 1e-15
UniRef50_UPI00006CBDDC Cluster: DEAD/DEAH box helicase family pr... 86 1e-15
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro... 86 1e-15
UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein; ... 86 1e-15
UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH bo... 86 1e-15
UniRef50_Q16KK0 Cluster: DEAD box ATP-dependent RNA helicase; n=... 86 1e-15
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 85 2e-15
UniRef50_Q86B47 Cluster: CG8611-PB, isoform B; n=2; Drosophila m... 85 2e-15
UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia intest... 85 2e-15
UniRef50_Q4UBV5 Cluster: DEAD-box family (RNA) helicase, putativ... 85 2e-15
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ... 85 2e-15
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 85 2e-15
UniRef50_Q6FML5 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 85 2e-15
UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;... 85 2e-15
UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio "Eu... 85 2e-15
UniRef50_Q9FQ90 Cluster: Putative chloroplast RNA helicase VDL' ... 85 2e-15
UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2; ... 85 2e-15
>UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF7914, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 502
Score = 269 bits (659), Expect = 7e-71
Identities = 123/174 (70%), Positives = 153/174 (87%), Gaps = 1/174 (0%)
Frame = +3
Query: 354 WKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIAL 533
WK LK+PPKD R++TSDVT T+GNEFE++CLKRELLMGIFE GWEKPSPIQE SIPIAL
Sbjct: 65 WKRNLKLPPKDNRVRTSDVTATKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIAL 124
Query: 534 SGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHT 713
SG+D+LARAKNGTGK+GAY IP+LE++D KKD IQAL++VPTRELALQ SQI I++AKH
Sbjct: 125 SGRDILARAKNGTGKSGAYLIPMLERIDLKKDHIQALVLVPTRELALQVSQISIQIAKHL 184
Query: 714 -DIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
++VM TTGGTNLRDDIMR+ + V V+IATPGR++DLM K VA++D+ +++V+
Sbjct: 185 GGVKVMATTGGTNLRDDIMRLDETVHVVIATPGRILDLMKKGVAKVDKVQIMVM 238
>UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n=1;
Mus musculus|Rep: UPI0000566899 UniRef100 entry - Mus
musculus
Length = 449
Score = 250 bits (613), Expect = 3e-65
Identities = 124/205 (60%), Positives = 161/205 (78%), Gaps = 4/205 (1%)
Frame = +3
Query: 270 NRISSSNHVGNSISQTKGEVDKSI---DDVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEE 440
N++ ++N + N Q + +I DD WK+ LK+PPKD RIKT DVT T+GNEFE+
Sbjct: 30 NQLKNTNTINNGTPQQAQSMAATIRPGDD--WKT-LKLPPKDLRIKTLDVTSTKGNEFED 86
Query: 441 FCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDP 620
+CLKRELL+GIFE GWE PS IQE SIPIALSG+D+LARAKNGTGK+GAY IP+LE++D
Sbjct: 87 YCLKRELLIGIFEMGWE-PSSIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDL 145
Query: 621 KKDTIQALIVVPTRELALQTSQICIELAKHT-DIRVMVTTGGTNLRDDIMRIYQNVQVII 797
KKD IQA+++VPTRELALQ SQICI+++KH +VM TTGGTNLRDD+MR+ V+I
Sbjct: 146 KKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDVMRLDDTGHVVI 205
Query: 798 ATPGRMIDLMDKQVARMDQCRMLVL 872
ATPGR++DL+ K + ++D +M+VL
Sbjct: 206 ATPGRILDLIKKCLEKVDHVQMVVL 230
>UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DHH1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 506
Score = 234 bits (572), Expect = 3e-60
Identities = 107/176 (60%), Positives = 138/176 (78%)
Frame = +3
Query: 345 DVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIP 524
D WK+ L IP KD R +T DV +T+GN FE+F LKRELLMGIFE G+EKPSPIQE +IP
Sbjct: 19 DRDWKTALNIPKKDTRPQTDDVLNTKGNTFEDFYLKRELLMGIFEAGFEKPSPIQEEAIP 78
Query: 525 IALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELA 704
+A++G+D+LARAKNGTGKT A+ IP LE+V PK + IQALI+VPTRELALQTSQ+ L
Sbjct: 79 VAITGRDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVRTLG 138
Query: 705 KHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
KH I MVTTGGTNLRDDI+R+ + V +++ TPGR++DL ++VA + C + ++
Sbjct: 139 KHCGISCMVTTGGTNLRDDILRLNETVHILVGTPGRVLDLASRKVADLSDCSLFIM 194
>UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4;
Dikarya|Rep: ATP-dependent RNA helicase DHH1 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 625
Score = 214 bits (523), Expect = 2e-54
Identities = 98/174 (56%), Positives = 135/174 (77%), Gaps = 1/174 (0%)
Frame = +3
Query: 354 WKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIAL 533
WK L PPKD R +T DVT T+G+ FE+F L+RELLMGI+ G+E+PSPIQE +IP+AL
Sbjct: 12 WKQGLAAPPKDLRPQTEDVTATQGSRFEDFGLRRELLMGIYTAGFERPSPIQEQAIPMAL 71
Query: 534 SGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKH- 710
+G+D+LARAKNGTGKT ++ IP L +++ IQALI+VPTRELALQTSQ+C L H
Sbjct: 72 TGRDILARAKNGTGKTASFIIPTLNRINTSLSHIQALILVPTRELALQTSQVCKTLGAHI 131
Query: 711 TDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+++VM+TTGGT LRDDI+R+ Q V +++ TPGR++DL K +A +++C + V+
Sbjct: 132 PNLQVMITTGGTTLRDDILRLQQPVHILVGTPGRILDLGSKGIASLNKCGVFVM 185
>UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6
protein - Homo sapiens (Human)
Length = 187
Score = 205 bits (501), Expect = 1e-51
Identities = 97/144 (67%), Positives = 117/144 (81%), Gaps = 3/144 (2%)
Frame = +3
Query: 270 NRISSSNHVGNSISQTKGEVDKSI---DDVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEE 440
N++ ++N + N Q + +I DD WK LK+PPKD RIKTSDVT T+GNEFE+
Sbjct: 43 NQLKNTNTINNGTQQQAQSMTTTIKPGDD--WKKTLKLPPKDLRIKTSDVTSTKGNEFED 100
Query: 441 FCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDP 620
+CLKRELLMGIFE GWEKPSPIQE SIPIALSG+D+LARAKNGTGK+GAY IP+LE++D
Sbjct: 101 YCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDL 160
Query: 621 KKDTIQALIVVPTRELALQTSQIC 692
KKD IQA+++VPTRELALQ SQIC
Sbjct: 161 KKDNIQAMVIVPTRELALQVSQIC 184
>UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_383_7421_6129 - Giardia lamblia ATCC
50803
Length = 430
Score = 147 bits (355), Expect = 5e-34
Identities = 73/167 (43%), Positives = 117/167 (70%), Gaps = 3/167 (1%)
Frame = +3
Query: 381 KDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARA 560
+D RI T DV + G F LK+ELLMG+ ++G+++ +P+QE +IP L+ +DV+ARA
Sbjct: 7 RDTRITTDDVKGS-GVLFSSLGLKQELLMGLTQEGFQQLTPVQELAIPHILARRDVVARA 65
Query: 561 KNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDI--RVMV 731
KNGTGKTG++ IP+L+ V+P KD IQAL+++ TRELA+QT+++ L+K+ D+ R+M
Sbjct: 66 KNGTGKTGSFLIPILQMVNPAKDHIQALVLLHTRELAMQTAKVAKTLSKNMPDVTGRIMC 125
Query: 732 TTGGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
GG ++ +D R + V++ATPGR+ L+D+++ C ++VL
Sbjct: 126 AIGGVSIAEDRERAREKPLVVLATPGRLQQLIDEEILNFRDCSIVVL 172
>UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
DHH1 - Encephalitozoon cuniculi
Length = 489
Score = 136 bits (328), Expect = 9e-31
Identities = 66/161 (40%), Positives = 107/161 (66%)
Frame = +3
Query: 387 RRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKN 566
+R+ + DV +T G +E L LL I + G++ PSP+Q ASIP L GK++L R+KN
Sbjct: 95 KRLLSEDVRETEGIGWESLGLGPVLLKRIRDIGYDFPSPVQVASIPHVLGGKNLLVRSKN 154
Query: 567 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGT 746
GTGKT +Y +P+L ++ + +IQ +I+VP RELALQ S+ +++ T + GGT
Sbjct: 155 GTGKTASYIVPMLNMINSSELSIQGIILVPIRELALQISRNVKRMSEGTGVISAPVVGGT 214
Query: 747 NLRDDIMRIYQNVQVIIATPGRMIDLMDKQVARMDQCRMLV 869
+++DDI+R+ V V++ TPGR++DL++K+V + + +LV
Sbjct: 215 SMQDDIIRVSNGVHVMVGTPGRIVDLVEKRVGTLSKRVILV 255
>UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3;
Thermoplasma|Rep: ATP-dependent RNA helicase -
Thermoplasma volcanium
Length = 373
Score = 126 bits (304), Expect = 7e-28
Identities = 60/147 (40%), Positives = 94/147 (63%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
FEEF L+ EL+ I G+ +P+ +Q +IPIAL+G D++ R+K G+GKT AY IP++
Sbjct: 4 FEEFNLRNELIESIRGTGYSEPTEVQSMAIPIALAGSDLVVRSKTGSGKTAAYLIPIINN 63
Query: 612 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQV 791
+K I+ALI++PTRELA+Q +++ L K + IR +V GG ++ I I + +
Sbjct: 64 TAKEKG-IRALILLPTRELAVQVAKVSEALGKRSGIRTVVVYGGVSINKQIELILRGANI 122
Query: 792 IIATPGRMIDLMDKQVARMDQCRMLVL 872
I+ TPGR +DL+D+ + D+ VL
Sbjct: 123 IVGTPGRTLDLIDRGILNFDKVSYFVL 149
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 125 bits (301), Expect = 2e-27
Identities = 61/148 (41%), Positives = 92/148 (62%), Gaps = 1/148 (0%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F EF + ELL I + G+E+P+PIQ +IP L GKDV +A+ GTGKT A+ IP++E+
Sbjct: 7 FAEFAISEELLQAIGDMGFEEPTPIQAMAIPQILDGKDVTGQAQTGTGKTAAFGIPIIER 66
Query: 612 VDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGGTNLRDDIMRIYQNVQ 788
+DP +QAL++ PTRELA+QT++ L K+ + V+ GG + + + VQ
Sbjct: 67 LDPDNKNVQALVLSPTRELAIQTAEEFSRLMKYKKGLNVVPIYGGQPIERQLRALKGTVQ 126
Query: 789 VIIATPGRMIDLMDKQVARMDQCRMLVL 872
V+I TPGR+ID + + +D M +L
Sbjct: 127 VVIGTPGRVIDHIKRGTLHLDSVTMFIL 154
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 124 bits (300), Expect = 2e-27
Identities = 54/147 (36%), Positives = 94/147 (63%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F + L ++L + + G+E+PSPIQ +IP L GKDV+ +A+ GTGKT A+ +P++E+
Sbjct: 8 FRDLALSEKVLKALDDMGFEEPSPIQAQAIPALLQGKDVIGQAQTGTGKTAAFGVPIVER 67
Query: 612 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQV 791
+ P + +QAL++ PTRELA+Q ++ ++ +H ++ + GG ++ I + V V
Sbjct: 68 LVPGQRAVQALVLTPTRELAIQVAEEITKIGRHARVKTIAIYGGQSIERQIRSLRFGVDV 127
Query: 792 IIATPGRMIDLMDKQVARMDQCRMLVL 872
+I TPGR++D + + + Q RM+VL
Sbjct: 128 VIGTPGRILDHLGRSTLDLSQVRMVVL 154
>UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase - Bacillus
halodurans
Length = 539
Score = 123 bits (297), Expect = 5e-27
Identities = 63/148 (42%), Positives = 94/148 (63%)
Frame = +3
Query: 429 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 608
+F E + E+ I E G+E+PSPIQ +IP L+G DV+ +A+ GTGKT A+ IPV+E
Sbjct: 7 KFNELQIGEEIKKAIIEMGFEEPSPIQAKAIPAILAGGDVIGQAQTGTGKTAAFGIPVVE 66
Query: 609 QVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQ 788
+V + +QALI+ PTRELA+Q S +L+KH IR + GG ++ I + Q VQ
Sbjct: 67 KVSTGRH-VQALILTPTRELAIQVSGEIQKLSKHKKIRTLPIYGGQSIVHQIKALKQGVQ 125
Query: 789 VIIATPGRMIDLMDKQVARMDQCRMLVL 872
V+I TPGR+ID + ++ +D ++L
Sbjct: 126 VVIGTPGRIIDHLRRKTLILDHVNTVIL 153
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 123 bits (296), Expect = 7e-27
Identities = 59/155 (38%), Positives = 101/155 (65%), Gaps = 8/155 (5%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F++F L E+L I E+G+ P+PIQ +IP+ LSG+DV+ A+ GTGKT ++ +P++++
Sbjct: 13 FDQFGLAAEILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQR 72
Query: 612 VDPKKDT--------IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIM 767
+ P+ +T ++ALI+ PTRELA Q + AKHT +R V GG ++ +
Sbjct: 73 LLPQANTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNPQMA 132
Query: 768 RIYQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+ + V+++IATPGR++D + ++ A + Q ++LVL
Sbjct: 133 ELRRGVEILIATPGRLLDHVQQKTANLGQVQILVL 167
>UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=16; cellular organisms|Rep: DEAD-box ATP-dependent RNA
helicase ydbR - Bacillus anthracis
Length = 528
Score = 122 bits (295), Expect = 9e-27
Identities = 52/147 (35%), Positives = 94/147 (63%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F E L LL + G+E+ +PIQ +IP AL GKD++ +A+ GTGKT A+ +P+L++
Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDK 63
Query: 612 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQV 791
VD K+++Q +++ PTRELA+Q + ++ KH +R++ GG ++ I + ++ +
Sbjct: 64 VDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPHI 123
Query: 792 IIATPGRMIDLMDKQVARMDQCRMLVL 872
I+ TPGR++D ++++ R+ +VL
Sbjct: 124 IVGTPGRILDHINRKTLRLQNVETVVL 150
>UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase
drs-1 - Neurospora crassa
Length = 829
Score = 122 bits (294), Expect = 1e-26
Identities = 64/153 (41%), Positives = 95/153 (62%), Gaps = 4/153 (2%)
Frame = +3
Query: 426 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 605
+ F+E L R +L G+ G+ KP+PIQ +IPI+L GKDV+ A G+GKT A+ +P+L
Sbjct: 293 SSFQEMSLSRPILRGLTSVGFTKPTPIQAKTIPISLMGKDVVGGAVTGSGKTAAFVVPIL 352
Query: 606 EQV--DPKK-DTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIY 776
E++ PKK T + +I+ PTRELA+Q + ++LA HTDI+ + GG +L+ +
Sbjct: 353 ERLLYRPKKVPTTRVVILTPTRELAIQCHAVAVKLASHTDIKFCLAVGGLSLKVQEAELR 412
Query: 777 QNVQVIIATPGRMIDLMDKQVA-RMDQCRMLVL 872
V+IATPGR ID M + +D +LVL
Sbjct: 413 LRPDVVIATPGRFIDHMRNSASFAVDTIEILVL 445
>UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=25; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 450
Score = 122 bits (293), Expect = 2e-26
Identities = 56/133 (42%), Positives = 89/133 (66%), Gaps = 1/133 (0%)
Frame = +3
Query: 477 EKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVP 656
E G + +PIQE +IP+ LSGKD++ +AK GTGKT A+ +P+LE++DP+ +QALIV P
Sbjct: 22 ENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPILEKIDPESSDVQALIVAP 81
Query: 657 TRELALQ-TSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMIDLMDK 833
TRELALQ T++I L + DI V+ GG ++ + ++ N +++ATPGR++D + +
Sbjct: 82 TRELALQITTEIKKMLVQREDINVLAIYGGQDVAQQLRKLKGNTHIVVATPGRLLDHIRR 141
Query: 834 QVARMDQCRMLVL 872
+ + +VL
Sbjct: 142 ETIDLSNLSTIVL 154
>UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, whole
genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_35,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 434
Score = 122 bits (293), Expect = 2e-26
Identities = 59/147 (40%), Positives = 92/147 (62%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
FE+ L ++LL GIF G+E+PS IQ+ +I + GKDVLA+A++GTGKTG + I L++
Sbjct: 58 FEDLTLSKDLLRGIFSYGFERPSAIQQKAIKPIILGKDVLAQAQSGTGKTGTFTIGALQR 117
Query: 612 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQV 791
+DP + Q +I+ P RELA Q + + ++ +I GGT+ ++ + Q V +
Sbjct: 118 IDPNQRKTQVIILAPVRELAKQIYDVVKGIGQYLNIEAFCCIGGTSTQETREKCKQGVHI 177
Query: 792 IIATPGRMIDLMDKQVARMDQCRMLVL 872
IIATPGR+ID+M + R+LV+
Sbjct: 178 IIATPGRLIDMMKNKYLDATFMRLLVV 204
>UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=90; Bacilli|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Bacillus subtilis
Length = 494
Score = 121 bits (291), Expect = 3e-26
Identities = 52/147 (35%), Positives = 97/147 (65%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F++F L +L+ I G+E+ +PIQ +IP+ LS KDV+ +A+ GTGKT A+ IP++E+
Sbjct: 5 FQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLVEK 64
Query: 612 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQV 791
++P+ IQA+++ PTRELA+Q S+ ++ + +V+ GG ++ I + +N +
Sbjct: 65 INPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRAKVLPIYGGQDIGRQIRALKKNPNI 124
Query: 792 IIATPGRMIDLMDKQVARMDQCRMLVL 872
I+ TPGR++D ++++ R++ +V+
Sbjct: 125 IVGTPGRLLDHINRRTIRLNNVNTVVM 151
>UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=7; Bacteria|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Geobacillus kaustophilus
Length = 467
Score = 120 bits (290), Expect = 4e-26
Identities = 56/147 (38%), Positives = 95/147 (64%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F+E L +E++ I G+E+ +PIQ +IP++L KDV+ +A+ GTGKT A+ IP++E+
Sbjct: 4 FQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVEK 63
Query: 612 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQV 791
V+ K +QAL+V PTRELA+Q S+ ++ +RV+ GG ++ I + ++ V
Sbjct: 64 VNVKNSAVQALVVAPTRELAIQVSEELYKIGAVKRVRVLPIYGGQDIERQIRALKKHPHV 123
Query: 792 IIATPGRMIDLMDKQVARMDQCRMLVL 872
I+ TPGR+ID +++ R++ +VL
Sbjct: 124 IVGTPGRIIDHINRGTLRLEHVHTVVL 150
>UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
ATP-dependent RNA helicase, DEAD/DEAH family -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 532
Score = 120 bits (289), Expect = 5e-26
Identities = 58/148 (39%), Positives = 94/148 (63%), Gaps = 1/148 (0%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F++ L+ ELL I E G+ +PSPIQ +IP L G+DV+ +A+ GTGKT A+ +P+L++
Sbjct: 7 FKDLPLEEELLKAIEELGFTEPSPIQSIAIPRLLEGRDVIGQAQTGTGKTAAFGLPLLQR 66
Query: 612 VDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGGTNLRDDIMRIYQNVQ 788
+D ++QAL++ PTRELALQ + LAKH +R++ GG + + + Q
Sbjct: 67 IDAADRSVQALVLCPTRELALQVANGLTALAKHLRGVRILSVYGGQPIEPQASALRRGAQ 126
Query: 789 VIIATPGRMIDLMDKQVARMDQCRMLVL 872
V++ TPGR++D +++ ++ RM VL
Sbjct: 127 VVVGTPGRILDHINRGTLQLGVVRMTVL 154
>UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 521
Score = 119 bits (287), Expect = 9e-26
Identities = 59/155 (38%), Positives = 95/155 (61%), Gaps = 1/155 (0%)
Frame = +3
Query: 411 TDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAY 590
T + +F E L E+ I E G+E+ SPIQ +IP+ L GKD++ A+ GTGKT A+
Sbjct: 4 TSMKKLKFSELNLSAEIQNAILEMGFEEASPIQSEAIPVILKGKDIIGHAQTGTGKTAAF 63
Query: 591 CIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHT-DIRVMVTTGGTNLRDDIM 767
IP +E ++ + +QALI+ PTREL +Q S+ +L K+ + V+ GG + +
Sbjct: 64 AIPTIELLEVESKHLQALILCPTRELVIQVSEQFRKLIKYKGNFEVVPIYGGQEIERQLR 123
Query: 768 RIYQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+ +N Q++IATPGRM+D M + +D+ +++VL
Sbjct: 124 ALRKNPQIVIATPGRMMDHMRRGSIHLDEIKIVVL 158
>UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6;
Helicobacteraceae|Rep: ATP-dependent RNA helicase DeaD -
Helicobacter hepaticus
Length = 530
Score = 119 bits (287), Expect = 9e-26
Identities = 61/143 (42%), Positives = 94/143 (65%)
Frame = +3
Query: 393 IKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGT 572
+K+ DT+G F+ F LK +L GI E G+ PSP+Q SIPI L GKD++A+A+ GT
Sbjct: 36 LKSKHKQDTQG--FDVFGLKDFVLKGIREAGFSTPSPVQSQSIPIILQGKDLIAQAQTGT 93
Query: 573 GKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNL 752
GKT A+ IP+L ++ KD I+ALI+ PTRELA+Q S+ ++L + I+ + GG ++
Sbjct: 94 GKTAAFAIPILNTLNRNKD-IEALIITPTRELAMQISEEILKLGRFGRIKTICMYGGQSI 152
Query: 753 RDDIMRIYQNVQVIIATPGRMID 821
+ + + + +IATPGR++D
Sbjct: 153 KRQCDLLEKKPKAMIATPGRLLD 175
>UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 783
Score = 119 bits (287), Expect = 9e-26
Identities = 65/174 (37%), Positives = 108/174 (62%), Gaps = 4/174 (2%)
Frame = +3
Query: 363 KLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGK 542
K+K+ +R++K + + FEE L R LL + + G+ +P+PIQ +IP+AL+GK
Sbjct: 171 KIKVLQSNRKLKK--IVEEELPTFEELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALNGK 228
Query: 543 DVLARAKNGTGKTGAYCIPVLEQV---DPKKDTIQALIVVPTRELALQTSQICIELAKHT 713
D+LA A G+GKT A+ +PVLE++ D + I+ LI++PTRELALQ + LA+ +
Sbjct: 229 DILASASTGSGKTAAFLLPVLERLLFRDSEYRAIRVLILLPTRELALQCQSVMENLAQFS 288
Query: 714 DIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMID-LMDKQVARMDQCRMLVL 872
+I + GG + + + + ++ V+IATPGR+ID L++ +D +L+L
Sbjct: 289 NITSCLIVGGLSNKAQEVELRKSPDVVIATPGRLIDHLLNAHGIGLDDLEILIL 342
>UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized protein
- Emericella nidulans (Aspergillus nidulans)
Length = 1676
Score = 118 bits (285), Expect = 2e-25
Identities = 69/200 (34%), Positives = 114/200 (57%), Gaps = 5/200 (2%)
Frame = +3
Query: 288 NHVGNSISQTKGEVDKSID-DVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELL 464
+H + S+ + + +D + K K P+++ + + T++ F+EF L R +L
Sbjct: 744 HHPDDEASEPDSDAESEVDAEEEAKRKAFFAPEEKTDEDA-ATNSAKRSFQEFNLSRPIL 802
Query: 465 MGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV--DPKK-DTI 635
G+ + P+PIQ+ +IP+AL GKD++ A G+GKT A+ +P+LE++ P+K T
Sbjct: 803 RGLAAVNFTNPTPIQQKTIPVALLGKDIVGSAVTGSGKTAAFVVPILERLLFRPRKVPTS 862
Query: 636 QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRM 815
+ I++PTRELA+Q + +LA +TDI GG +LR+ + + VIIATPGR
Sbjct: 863 RVAILMPTRELAVQCYNVATKLATYTDITFCQLVGGFSLREQENVLKKRPDVIIATPGRF 922
Query: 816 IDLMDKQVA-RMDQCRMLVL 872
ID M + +D +LVL
Sbjct: 923 IDHMRNSASFTVDTLEILVL 942
>UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1;
uncultured methanogenic archaeon RC-I|Rep: ATP-dependent
RNA helicase - Uncultured methanogenic archaeon RC-I
Length = 497
Score = 118 bits (285), Expect = 2e-25
Identities = 53/148 (35%), Positives = 91/148 (61%)
Frame = +3
Query: 429 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 608
+F E L ++ + E G+E+ +PIQE +IP+A+ GKD++ +A+ GTGKT A+ IP++E
Sbjct: 3 KFTELNLTPSIVRAVHEMGFEEATPIQEQAIPLAMEGKDLIGQARTGTGKTAAFGIPMVE 62
Query: 609 QVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQ 788
+ P +Q L+VVPTRELA+Q ++ + K IR + GG + R + + +
Sbjct: 63 AIRPTSKGVQGLVVVPTRELAVQVAEELTRIGKVRGIRSVAIYGGQDFRSQVKALEELPH 122
Query: 789 VIIATPGRMIDLMDKQVARMDQCRMLVL 872
+++ TPGR+++ M ++ R R+ VL
Sbjct: 123 IVVGTPGRLLEHMRREYVRTSDIRIAVL 150
>UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3;
Thermoprotei|Rep: Superfamily II helicase - Cenarchaeum
symbiosum
Length = 434
Score = 118 bits (285), Expect = 2e-25
Identities = 59/148 (39%), Positives = 98/148 (66%)
Frame = +3
Query: 429 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 608
+FEE +K+ +L + + G+EK PIQEA+IP+ L+G+DV+ +A GTGKTGAY I +L+
Sbjct: 3 KFEELGIKQNVLDALRDMGFEKAFPIQEAAIPVLLTGRDVVGQAHTGTGKTGAYSISMLQ 62
Query: 609 QVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQ 788
++ + IQ LIV PTRELA+Q ++ + AK+T +R + GG ++ + + + +
Sbjct: 63 EI-KEGGGIQGLIVAPTRELAVQITEEVKKFAKYTKVRPVAIYGGQSMGVQLDALKRGAE 121
Query: 789 VIIATPGRMIDLMDKQVARMDQCRMLVL 872
+++ATPGR+ID + + +D+ LVL
Sbjct: 122 ILVATPGRLIDHIKRGSISIDRVTHLVL 149
>UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=9; Bacteroidetes/Chlorobi
group|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium limicola DSM 245
Length = 499
Score = 118 bits (284), Expect = 2e-25
Identities = 67/184 (36%), Positives = 101/184 (54%), Gaps = 5/184 (2%)
Frame = +3
Query: 336 SIDDVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEA 515
S D G K I P R +T+D TDT +F + +L I E+G++ P+PIQ
Sbjct: 55 SYGDTG-KISGSIHPLTYRNQTTDHTDTM--QFRSLAIIEPILQAIEEEGYQTPTPIQAE 111
Query: 516 SIPIALSGKDVLARAKNGTGKTGAYCIPVLE-----QVDPKKDTIQALIVVPTRELALQT 680
+IP+ L G D+L A+ GTGKT A+ IPVL+ + + KK I++LI+ PTRELA+Q
Sbjct: 112 AIPLILDGNDLLGCAQTGTGKTAAFAIPVLQLLNAVKTNEKKRKIRSLIITPTRELAIQI 171
Query: 681 SQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVARMDQCR 860
+ +HT + V GG N + + + ++IATPGR++DLM++ +
Sbjct: 172 GESFKAYGRHTGLTSTVIFGGVNQNPQTASLQKGIDILIATPGRLLDLMNQGHLHLRNIE 231
Query: 861 MLVL 872
VL
Sbjct: 232 FFVL 235
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 118 bits (284), Expect = 2e-25
Identities = 56/149 (37%), Positives = 92/149 (61%), Gaps = 2/149 (1%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE- 608
F E L +L + + + +P+PIQ +I AL+GKD++A A+ GTGKT A+ +P ++
Sbjct: 4 FSELPLSAQLKSNLAKNNFTEPTPIQSLAIEPALAGKDIVATAQTGTGKTLAFLLPTIQL 63
Query: 609 -QVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNV 785
+P++ ++ALI+ PTRELALQ ++ +++A+ T IR V GG N R + I
Sbjct: 64 LSTEPRQPGVRALILTPTRELALQINEALLQIARGTGIRAAVAVGGLNERSQLRDIRGGA 123
Query: 786 QVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+++ATPGR+ D M + + + RML+L
Sbjct: 124 NIVVATPGRLYDFMSRGLINLTTVRMLIL 152
>UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4;
Ascomycota|Rep: 2-isopropylmalate synthase - Ajellomyces
capsulatus NAm1
Length = 1466
Score = 118 bits (284), Expect = 2e-25
Identities = 74/194 (38%), Positives = 108/194 (55%), Gaps = 5/194 (2%)
Frame = +3
Query: 306 ISQTKGEVDKSIDDVGW-KSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEK 482
I+ G D+S D K K P+++ D+ + F+ F L R +L G+
Sbjct: 266 ITSDDGSGDESEDAAEIEKQKSFFAPEEKPSANGDLKSAKS--FQAFSLSRPILRGLTSV 323
Query: 483 GWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV--DPKK-DTIQALIVV 653
G+ P+PIQ +IP+AL GKDV+ A G+GKTGA+ IP+LE++ P+K T + I++
Sbjct: 324 GFTTPTPIQRKTIPVALLGKDVVGGAVTGSGKTGAFIIPILERLLYRPRKVPTSRVAILM 383
Query: 654 PTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMIDLMDK 833
PTRELA+Q + +LA TDI GG +LR+ + + VIIATPGR ID M
Sbjct: 384 PTRELAVQCYNVATKLATFTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRN 443
Query: 834 QVA-RMDQCRMLVL 872
+ +D +LVL
Sbjct: 444 SASFTVDTLEILVL 457
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 118 bits (283), Expect = 3e-25
Identities = 58/147 (39%), Positives = 97/147 (65%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F LK +LL I EKG+EKP+PIQ SIPIA++G D++ +A+ GTGKT ++ IP+L +
Sbjct: 6 FYSMGLKTDLLQMIDEKGFEKPTPIQVKSIPIAMAGLDLMGQAQTGTGKTASFGIPILNR 65
Query: 612 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQV 791
V K + +QAL++ PTRELA+Q ++ L++ I+V+ GG ++ + + +N ++
Sbjct: 66 V-IKGEGLQALVLCPTRELAVQVTEEISSLSRRMRIQVLAIYGGQSIELQLRSLRRNPEI 124
Query: 792 IIATPGRMIDLMDKQVARMDQCRMLVL 872
I+ TPGR++D M++ + + +VL
Sbjct: 125 IVGTPGRLMDHMNRGTISLSPLKYVVL 151
>UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 834
Score = 118 bits (283), Expect = 3e-25
Identities = 76/221 (34%), Positives = 121/221 (54%), Gaps = 20/221 (9%)
Frame = +3
Query: 270 NRISSSNHVGNSI--SQTKGEVDKSIDDVGWKSK-LK-IPPKDRRIKTSDVT-DTRGN-- 428
N +++N++ N+ S G+ + D W K LK + +D I D T+G
Sbjct: 349 NNNNNNNNINNNNNGSMIGGKQISELPDTHWSKKPLKSMTKRDWHIFKEDFNISTKGGIA 408
Query: 429 -----EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYC 593
++E L RE+L I + G+EKPSPIQ SIPI+L+G+D+L A+ G+GKT A+
Sbjct: 409 PNPIRTWQESNLPREILEAIRQLGYEKPSPIQMQSIPISLTGRDILGIAETGSGKTCAFV 468
Query: 594 IPVLEQV--------DPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTN 749
IP+L + D + D AL++ PTREL Q + A+H RV+ GG +
Sbjct: 469 IPMLIYISKQPRLTKDTEADGPYALVMAPTRELVQQIEKETRNFAQHFGFRVVSLVGGQS 528
Query: 750 LRDDIMRIYQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+ D ++ + ++IIATPGR+ D ++K+ ++QC +VL
Sbjct: 529 IEDQAYQVSKGCEIIIATPGRLNDCLEKRYLVLNQCNYIVL 569
>UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=1;
Desulfotalea psychrophila|Rep: Probable ATP-dependent
RNA helicase - Desulfotalea psychrophila
Length = 632
Score = 117 bits (282), Expect = 3e-25
Identities = 53/147 (36%), Positives = 93/147 (63%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F +F LK +L+ + + G+ +P+PIQE +IP+ L+G D++ +A+ GTGKT A+ +P+L
Sbjct: 57 FTDFNLKSDLVANLVKLGFSQPTPIQEKAIPLLLAGSDLIGQAQTGTGKTAAFGLPLLNN 116
Query: 612 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQV 791
+D K +QAL++ PTRELA Q + V+V GG++ + + + + +V
Sbjct: 117 IDFSKKCVQALVLAPTRELAQQVGDALATYSGDDGRNVLVVYGGSSYQAQVGGLRRGARV 176
Query: 792 IIATPGRMIDLMDKQVARMDQCRMLVL 872
++ TPGR++DL+ + ++DQ + LVL
Sbjct: 177 VVGTPGRLLDLIRQGSLKLDQLKTLVL 203
>UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2;
Synechococcus|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 458
Score = 117 bits (282), Expect = 3e-25
Identities = 60/173 (34%), Positives = 100/173 (57%), Gaps = 6/173 (3%)
Frame = +3
Query: 372 IPPKDRRIKTSDVTDTRGNE--FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKD 545
+ KD S++ + N FE+ L E + I E G+ P+PIQ +IP L GKD
Sbjct: 4 VSAKDHSPIISNLKNDNNNTLTFEQLELCAETVRSIKESGYLSPTPIQALTIPEVLQGKD 63
Query: 546 VLARAKNGTGKTGAYCIPVLEQV----DPKKDTIQALIVVPTRELALQTSQICIELAKHT 713
++A A+ GTGKT A+ +P++E + PK+ + +L++ PTRELA Q K+
Sbjct: 64 IMASAQTGTGKTAAFILPIIELLRAEDKPKRYQVHSLVLTPTRELAAQVEASAKAYTKYL 123
Query: 714 DIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+R GG ++R + R+ V +++ATPGR++DL+++++ R D ++LVL
Sbjct: 124 ALRSDAVFGGVSIRPQVKRLQGGVDILVATPGRLLDLINQKMIRFDNLKVLVL 176
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 117 bits (281), Expect = 5e-25
Identities = 49/147 (33%), Positives = 96/147 (65%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F E + +E + + + G+ P+ IQ +IP LSG+DV+ +++ GTGKT A+ +P+LE+
Sbjct: 5 FPELGISQERVEHLEKLGFTAPTNIQAQAIPQLLSGRDVVGQSQTGTGKTAAFSLPILER 64
Query: 612 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQV 791
+DP++ +QA+++ PTRELA+Q + ++ +R + GG ++ ++++ + V +
Sbjct: 65 LDPQQKAVQAIVLTPTRELAIQVHDAMAQFVGNSGLRTLAIYGGQSIDRQMLQLKRGVHI 124
Query: 792 IIATPGRMIDLMDKQVARMDQCRMLVL 872
++ TPGR+IDL+++ ++DQ + VL
Sbjct: 125 VVGTPGRVIDLLERGNLKLDQVKWFVL 151
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 117 bits (281), Expect = 5e-25
Identities = 63/164 (38%), Positives = 99/164 (60%), Gaps = 4/164 (2%)
Frame = +3
Query: 393 IKTSDVTDTRGN--EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALS-GKDVLARAK 563
+ T V D N FE+F L E+L+ I +KG+EKP+ IQ+ +P ALS KD++A+A+
Sbjct: 5 VNTGSVLDETKNYERFEDFGLSEEILLAIQKKGYEKPTEIQKIVLPYALSTDKDLIAQAQ 64
Query: 564 NGTGKTGAYCIPVLEQVDPKKDT-IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTG 740
GTGKT A+ IP+LE++D K + ++A+IV PTRELALQ + L +++ G
Sbjct: 65 TGTGKTAAFGIPLLERIDFKANKFVKAIIVTPTRELALQIFEELKSLKGTKRVKITTLYG 124
Query: 741 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
G +L + + V +++ TPGR+ID +++ + LVL
Sbjct: 125 GQSLEKQFKDLEKGVDIVVGTPGRIIDHLNRDTLDLSHVEYLVL 168
>UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Anaeromyxobacter sp. Fw109-5|Rep: DEAD/DEAH box
helicase domain protein - Anaeromyxobacter sp. Fw109-5
Length = 680
Score = 117 bits (281), Expect = 5e-25
Identities = 52/147 (35%), Positives = 90/147 (61%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F+E L + I E G+E+P+P+Q ++ GKDV+ R+K GTGKT A+ IP+LE+
Sbjct: 22 FDELGLSEPVRRAIAEHGYERPTPVQVSTFRPVRDGKDVIVRSKTGTGKTAAFAIPILER 81
Query: 612 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQV 791
+ + AL++ PTRELA+Q +Q LAKH D+ V+ GG ++ + + ++ ++
Sbjct: 82 IADGRRRPSALVMCPTRELAIQVAQEFTALAKHRDLSVVAVYGGASMGEQLQKLEAGAEI 141
Query: 792 IIATPGRMIDLMDKQVARMDQCRMLVL 872
I+ TPGR+ D + ++ ++D+ + L
Sbjct: 142 IVGTPGRIYDHIRRRTLKLDETMVCCL 168
>UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 425
Score = 117 bits (281), Expect = 5e-25
Identities = 56/151 (37%), Positives = 94/151 (62%)
Frame = +3
Query: 420 RGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIP 599
+G EF EF + ++ + + G+E +PIQ ++P+ L G DV+ A+ GTGKT A+ IP
Sbjct: 2 KGLEFSEFDISGDINRALDDMGFESTTPIQALTLPVTLDGMDVVGEAQTGTGKTAAFAIP 61
Query: 600 VLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQ 779
VLE ++ ++ QALI+ PTREL LQ S+ + K+ ++V+ GG ++ + I ++ +
Sbjct: 62 VLENLEAER-VPQALIICPTRELCLQVSEEIKRIGKYMKVKVLAVYGGQSIGNQIAQLRR 120
Query: 780 NVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
V VI+ATPGR+ID +++ + +VL
Sbjct: 121 GVHVIVATPGRLIDHIERGTVDLGGISTVVL 151
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 117 bits (281), Expect = 5e-25
Identities = 54/153 (35%), Positives = 97/153 (63%), Gaps = 6/153 (3%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F+ L ++L + E+G+ +P+PIQ+ +IP L G+D++A A+ GTGKT + +P+L+
Sbjct: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62
Query: 612 VDPKKD------TIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 773
+ ++ ++ALI+ PTRELA Q + + +K+ +IR +V GG ++ +M++
Sbjct: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122
Query: 774 YQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
V V++ATPGR++DL + ++DQ +LVL
Sbjct: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQVEILVL 155
>UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n=1;
unknown|Rep: UPI00015BD198 UniRef100 entry - unknown
Length = 364
Score = 116 bits (280), Expect = 6e-25
Identities = 57/144 (39%), Positives = 94/144 (65%), Gaps = 2/144 (1%)
Frame = +3
Query: 447 LKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKK 626
L EL + + G+++P+PIQ +IP+AL G D+L +A GTGKTGA+ IP++E++ K
Sbjct: 7 LSLELQKALEDAGYKEPTPIQRDAIPLALEGYDILGQAATGTGKTGAFAIPIVEKLQKGK 66
Query: 627 DTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRD--DIMRIYQNVQVIIA 800
++AL++ PTRELA+Q + L K+ + V GGT+++ DI++ +NV ++I
Sbjct: 67 PDVKALVLTPTRELAIQVKEQIYMLTKYKRLSSYVFYGGTSVKQNLDILQ-NKNVDILIG 125
Query: 801 TPGRMIDLMDKQVARMDQCRMLVL 872
TPGR+ DL+D++ + + LVL
Sbjct: 126 TPGRIKDLIDRKALNLSKVEYLVL 149
>UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2;
Chaetomium globosum|Rep: ATP-dependent RNA helicase DRS1
- Chaetomium globosum (Soil fungus)
Length = 795
Score = 116 bits (280), Expect = 6e-25
Identities = 62/153 (40%), Positives = 93/153 (60%), Gaps = 4/153 (2%)
Frame = +3
Query: 426 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 605
+ F+ L R +L G+ G+ KP+PIQ +IPIAL GKDV+ A G+GKT A+ +P+L
Sbjct: 276 SSFQGMSLSRPILRGLTSVGFTKPTPIQAKTIPIALMGKDVVGGAVTGSGKTAAFVVPIL 335
Query: 606 EQV--DPKK-DTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIY 776
E++ PKK T + +++ PTRELA+Q + +LA HTDI+ + GG +L+ +
Sbjct: 336 ERLLYRPKKVPTTRVVVLTPTRELAIQCHSVATKLASHTDIKFCLAVGGLSLKVQEGELR 395
Query: 777 QNVQVIIATPGRMIDLMDKQVA-RMDQCRMLVL 872
V+IATPGR ID M + ++ +LVL
Sbjct: 396 LRPDVVIATPGRFIDHMRNSASFAVETVEILVL 428
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 116 bits (279), Expect = 8e-25
Identities = 58/151 (38%), Positives = 89/151 (58%), Gaps = 4/151 (2%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F L + + E+G++ PSPIQ +IP L+GKDV+A A+ GTGKT + +P+LE
Sbjct: 3 FSSLGLSLPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLEL 62
Query: 612 VDP----KKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQ 779
+ K I+AL++ PTRELA Q S+ K+ +R V GG + I ++
Sbjct: 63 LSKGNKAKAGQIRALVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQKLRH 122
Query: 780 NVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
V V++ATPGR++DL+ + V + +Q +LVL
Sbjct: 123 GVDVLVATPGRLLDLVQQNVVKFNQLEILVL 153
>UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 400
Score = 116 bits (279), Expect = 8e-25
Identities = 53/148 (35%), Positives = 94/148 (63%), Gaps = 1/148 (0%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
+ + L E++ I +KG+ + +P+Q +IP + KDV+A+A GTGKT A+ IP++E
Sbjct: 14 YADLGLSAEVMKAIDKKGYVRATPVQAGAIPYFMEWKDVIAKAPTGTGKTFAFGIPMVEH 73
Query: 612 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTD-IRVMVTTGGTNLRDDIMRIYQNVQ 788
+DP+ D +QAL++ PTRELALQ +L + + +R + GG + I + ++ Q
Sbjct: 74 IDPESDAVQALVLAPTRELALQIQDELRDLCEFKEGVRSVCLYGGAPIEKQITTLKKHPQ 133
Query: 789 VIIATPGRMIDLMDKQVARMDQCRMLVL 872
+++ATPGR++D M ++ ++D+ +VL
Sbjct: 134 IVVATPGRLMDHMKRRTVKLDKVETVVL 161
>UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase
DbpA; n=1; Candidatus Kuenenia stuttgartiensis|Rep:
Similar to ATP-independent RNA helicase DbpA -
Candidatus Kuenenia stuttgartiensis
Length = 407
Score = 116 bits (278), Expect = 1e-24
Identities = 54/148 (36%), Positives = 92/148 (62%)
Frame = +3
Query: 429 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 608
+F + L ++L + + G+ + +PIQEA+ PI +G D+ A A+ G+GKT A IP+++
Sbjct: 2 KFSDLELSADILKALDKMGYNEMTPIQEATYPIIFAGHDLCALAETGSGKTAACAIPLIQ 61
Query: 609 QVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQ 788
+VDP D IQ L++VPTREL +Q + ++A TD+ GG + I R+ Q V
Sbjct: 62 KVDPSLDAIQGLVIVPTRELCMQYVEEIRKIAAKTDVIPYAVYGGFDRAAQIARVKQTVH 121
Query: 789 VIIATPGRMIDLMDKQVARMDQCRMLVL 872
+++ATPGR+IDL+ + + + + ++L
Sbjct: 122 ILVATPGRLIDLLYEGILSFARIKCVIL 149
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 116 bits (278), Expect = 1e-24
Identities = 59/150 (39%), Positives = 91/150 (60%), Gaps = 3/150 (2%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F E L + +L + E G+EKPSPIQE +IP AL+G+DVL A+ GTGKT A+ P+L++
Sbjct: 3 FRELGLTQSILKALAELGYEKPSPIQEKAIPPALAGRDVLGCAQTGTGKTCAFAAPILQR 62
Query: 612 VD---PKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQN 782
+ P I++LI+ PTRELALQ + KH +R V GG + + ++ +
Sbjct: 63 LGGDIPAGRPIRSLILTPTRELALQIQESFEAYGKHLPLRSAVIFGGVGQQPQVDKLKKG 122
Query: 783 VQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
V +++ATPGR++DL + + + + VL
Sbjct: 123 VDILVATPGRLLDLQGQGFVDLSRLEIFVL 152
>UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to
CG32344-PA - Apis mellifera
Length = 743
Score = 115 bits (277), Expect = 1e-24
Identities = 60/181 (33%), Positives = 106/181 (58%), Gaps = 8/181 (4%)
Frame = +3
Query: 333 KSIDDVGWKSKLKIPPKDRRIKTSDVTDT---RGNEFEEFCLKRELLMGIFEKGWEKPSP 503
K+ + VG+ +I D + +D+ + F+ L +L GI ++G++ P+P
Sbjct: 2 KNTNIVGFADPKEISDNDEENEINDIKKKVYKKSGGFQSMALSFPILKGILKRGYKIPTP 61
Query: 504 IQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTI--QALIVVPTRELALQ 677
IQ +IP+AL G+D++A A+ G+GKT + IP+ E++ ++ + +ALI+ PTRELALQ
Sbjct: 62 IQRKTIPLALEGRDIVAMARTGSGKTACFLIPLFEKLKIRQAKVGARALILSPTRELALQ 121
Query: 678 TSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMIDL---MDKQVARM 848
T + EL + T ++ + GG N+ + I+ N ++IATPGR + + MD Q+ +
Sbjct: 122 TLKFIKELGRFTGLKATIILGGDNMENQFSAIHGNPDILIATPGRFLHICIEMDLQLNNI 181
Query: 849 D 851
+
Sbjct: 182 E 182
>UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III;
n=366; root|Rep: Eukaryotic initiation factor 4A-III -
Homo sapiens (Human)
Length = 411
Score = 115 bits (277), Expect = 1e-24
Identities = 60/156 (38%), Positives = 97/156 (62%)
Frame = +3
Query: 405 DVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTG 584
DVT T F+ L+ +LL GI+ G+EKPS IQ+ +I + G+DV+A++++GTGKT
Sbjct: 35 DVTPT----FDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTA 90
Query: 585 AYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDI 764
+ I VL+ +D + QALI+ PTRELA+Q + + L + +++ GGTN+ +DI
Sbjct: 91 TFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDI 150
Query: 765 MRIYQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
++ V+ TPGR+ D++ ++ R +MLVL
Sbjct: 151 RKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVL 186
>UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 4 SCAF14575, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 532
Score = 114 bits (275), Expect = 2e-24
Identities = 56/167 (33%), Positives = 96/167 (57%), Gaps = 2/167 (1%)
Frame = +3
Query: 375 PPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLA 554
P ++ + + F+ L + G+ KG++ P+PIQ +IP+ L GKDV+A
Sbjct: 20 PDTREMVRAQNKKKKKSGGFQSMGLSFPVFKGVMRKGYKVPTPIQRKTIPVILDGKDVVA 79
Query: 555 RAKNGTGKTGAYCIPVLEQVD-PKKDT-IQALIVVPTRELALQTSQICIELAKHTDIRVM 728
A+ G+GKT A+ IP+ E++ P+ T +ALI+ PTRELALQT + EL K T ++
Sbjct: 80 MARTGSGKTAAFLIPMFERLKAPQAQTGARALILSPTRELALQTMKFTKELGKFTKLKTA 139
Query: 729 VTTGGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVARMDQCRMLV 869
+ GG ++ D +++N +II TPGR++ ++ + ++ +V
Sbjct: 140 LILGGDSMDDQFAALHENPDIIIGTPGRLMHVIKEMNLKLQNVEYVV 186
>UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 684
Score = 114 bits (274), Expect = 3e-24
Identities = 50/146 (34%), Positives = 92/146 (63%), Gaps = 1/146 (0%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F+ L ++ L+G+ +KG+ P+PIQ +IP L G D++A A+ G+GKT AY +P++ +
Sbjct: 15 FQSMGLNKQTLLGVLKKGYRVPTPIQRKAIPAILRGNDIIAMARTGSGKTAAYLVPIINR 74
Query: 612 VDP-KKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQ 788
++ + +++LI+ PTRELALQT ++ EL K T+++ + GG+ L D +
Sbjct: 75 LETHSTEGVRSLIICPTRELALQTIKVFNELGKLTNLKASLIIGGSKLSDQFDNLSSGPD 134
Query: 789 VIIATPGRMIDLMDKQVARMDQCRML 866
+I+ATPGR+ +++ +++ M+
Sbjct: 135 IIVATPGRLTFILEGANISLNRVEMV 160
>UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Petrotoga mobilis SJ95
Length = 530
Score = 114 bits (274), Expect = 3e-24
Identities = 55/149 (36%), Positives = 95/149 (63%), Gaps = 1/149 (0%)
Frame = +3
Query: 429 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKD-VLARAKNGTGKTGAYCIPVL 605
+F++ L +L I KG+E P+PIQE IP+ LSGK+ V+ +A+ GTGKT A+ IP++
Sbjct: 3 KFQQMGLSDNILSAIDRKGYEAPTPIQEKVIPLLLSGKNNVIGQAQTGTGKTAAFGIPLI 62
Query: 606 EQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNV 785
E++D K + +QAL++ PTRELALQ L + + ++ GG ++ + I + + V
Sbjct: 63 ERLDEKANDVQALVLTPTRELALQVCNEIDSLKGNKRLNLLPVYGGVSIGNQIRALKRRV 122
Query: 786 QVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+++ TPGR+ID +++ + + + LV+
Sbjct: 123 DLVVGTPGRIIDHLNRGTLDITKIKYLVI 151
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 114 bits (274), Expect = 3e-24
Identities = 57/151 (37%), Positives = 88/151 (58%), Gaps = 4/151 (2%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F L + + E+G++ PSPIQ +IP L+GKDV+A A+ GTGKT + +P+LE
Sbjct: 3 FSSLGLSAPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLEL 62
Query: 612 VDP----KKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQ 779
+ K I+AL++ PTRELA Q S+ K+ +R V GG + I ++
Sbjct: 63 LSKGNKAKAGQIRALVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQKLRH 122
Query: 780 NVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
V V++ATPGR++DL ++ + +Q +LVL
Sbjct: 123 GVDVLVATPGRLLDLEQQKAVKFNQLEVLVL 153
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 113 bits (273), Expect = 4e-24
Identities = 56/150 (37%), Positives = 91/150 (60%), Gaps = 2/150 (1%)
Frame = +3
Query: 429 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 608
+F++ LK LL I + G+E+PS IQ SIP+AL G D++ +A+ GTGKT A+ ++
Sbjct: 5 KFDDLGLKESLLKAIKDMGFEEPSQIQAESIPVALEGHDIIGQAQTGTGKTAAFGCAIIN 64
Query: 609 QVD--PKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQN 782
D KK + +ALI+ PTRELA+Q ++ + L KH + V+ GG + I +
Sbjct: 65 NADFSGKKKSPKALILAPTRELAIQVNEELVRLGKHEKLSVLPIYGGQPIDRQIRALKNG 124
Query: 783 VQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
V +++ TPGR++DL+ ++ ++ LVL
Sbjct: 125 VDIVVGTPGRVLDLIRRKSLPLNDIGFLVL 154
>UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1;
Flavobacteria bacterium BBFL7|Rep: ATP-dependent RNA
helicase - Flavobacteria bacterium BBFL7
Length = 644
Score = 113 bits (273), Expect = 4e-24
Identities = 59/149 (39%), Positives = 92/149 (61%), Gaps = 2/149 (1%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGK-DVLARAKNGTGKTGAYCIPVLE 608
FE L + LL G+ + G+E P+ IQ+ SIPI L D + A+ GTGKT A+ +P+L+
Sbjct: 15 FEVLGLSQPLLNGLADMGFENPTEIQQQSIPILLKHDGDFIGLAQTGTGKTAAFGLPLLD 74
Query: 609 QVDPKKDTIQALIVVPTRELALQTSQICIELAKHT-DIRVMVTTGGTNLRDDIMRIYQNV 785
+D +QALI+ PTRELA Q +++KH + V+ GG N+ + I I +
Sbjct: 75 LIDVNSREVQALILAPTRELAQQICGQMEQMSKHLGKLNVVPVFGGANIMNQIRDIRRGA 134
Query: 786 QVIIATPGRMIDLMDKQVARMDQCRMLVL 872
Q+I+ATPGR++DLM ++ ++D + +VL
Sbjct: 135 QIIVATPGRLMDLMKRREVKLDALKYMVL 163
>UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Bacteroides
thetaiotaomicron
Length = 647
Score = 113 bits (272), Expect = 6e-24
Identities = 57/149 (38%), Positives = 92/149 (61%), Gaps = 2/149 (1%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALS-GKDVLARAKNGTGKTGAYCIPVLE 608
FEE + E+ I E G+E P P+QE IP L DV+A A+ GTGKT A+ +P+L+
Sbjct: 4 FEELGVSPEIRKAIEEMGYENPMPVQEEVIPYLLGENNDVVALAQTGTGKTAAFGLPLLQ 63
Query: 609 QVDPKKDTIQALIVVPTRELALQTSQICIELAKHTD-IRVMVTTGGTNLRDDIMRIYQNV 785
Q+D K Q+LI+ PTREL LQ + + +K+ D ++V+ GG+++ I + + V
Sbjct: 64 QIDVKNRVPQSLILCPTRELCLQIAGDLNDYSKYIDGLKVLPVYGGSSIDSQIRSLKRGV 123
Query: 786 QVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+I+ATPGR++DLM+++ + +V+
Sbjct: 124 HIIVATPGRLLDLMERKTVSLSTVHNIVM 152
>UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 656
Score = 113 bits (271), Expect = 7e-24
Identities = 54/153 (35%), Positives = 91/153 (59%), Gaps = 1/153 (0%)
Frame = +3
Query: 417 TRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSG-KDVLARAKNGTGKTGAYC 593
T + FE F L ++ + + G+ P+PIQ ++PI L+G D + A GTGKT A+
Sbjct: 41 TTVDNFESFGLSAPVMAAMADMGFTTPTPIQRQALPILLAGANDFIGLASTGTGKTAAFG 100
Query: 594 IPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 773
IP++E +D QAL++ PTRELALQ ++ L K +RV+ GG + R I I
Sbjct: 101 IPLIENIDSTVKDTQALVLSPTRELALQVAEQLTLLGKKKGVRVVTIYGGASYRTQIDGI 160
Query: 774 YQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+ +++ATPGR++D +++++ ++ + +VL
Sbjct: 161 KRGAHIVVATPGRLVDFLEQKMIKLQSVKTVVL 193
>UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 722
Score = 113 bits (271), Expect = 7e-24
Identities = 61/158 (38%), Positives = 93/158 (58%), Gaps = 1/158 (0%)
Frame = +3
Query: 402 SDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKT 581
+D DT F L E+L + + G+ P+PIQ A+IP L +DV+ A+ GTGKT
Sbjct: 37 ADEEDTDTVTFASLGLPEEILAAVTDMGFRVPTPIQAAAIPPLLELRDVVGIAQTGTGKT 96
Query: 582 GAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHT-DIRVMVTTGGTNLRD 758
A+ +P+L VD + +QAL++ PTRELA+Q++Q + A T + V+ GG+
Sbjct: 97 AAFGLPLLAIVDADERNVQALVLAPTRELAMQSAQAIEDFAARTARLDVVPVYGGSPYGP 156
Query: 759 DIMRIYQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
I + + QV++ TPGR+IDL++K + RMLVL
Sbjct: 157 QIGALKRGAQVVVGTPGRVIDLIEKGALDLSHVRMLVL 194
>UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 1091
Score = 113 bits (271), Expect = 7e-24
Identities = 61/198 (30%), Positives = 113/198 (57%), Gaps = 6/198 (3%)
Frame = +3
Query: 243 DKFGKMMTENRISSSNHVGNSISQTKGEVDKSIDDVGWKSKLKIPPKDRRIKTSDVTDTR 422
+K K +N+ + +++ + S K E++ S K + P D + + T ++
Sbjct: 172 EKQAKKSNKNKNADADNKKSKKSNKKEEIESS-------EKFESFPMDENNEQEEETTSK 224
Query: 423 GNE----FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAY 590
+ F+ L + LL I +KG+ P+PIQ SIP+ L G D++ A+ G+GKTGA+
Sbjct: 225 KKKKTGGFQSMDLTKNLLKAILKKGFNVPTPIQRKSIPMILDGHDIVGMARTGSGKTGAF 284
Query: 591 CIPVLEQVDPKKDT--IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDI 764
IP+++++ T ++A+I+ PTRELA+QT ++ + ++ T +R ++ GG ++ D
Sbjct: 285 VIPMIQKLGDHSTTVGVRAVILSPTRELAIQTFKVVKDFSQGTQLRTILIVGGDSMEDQF 344
Query: 765 MRIYQNVQVIIATPGRMI 818
+ +N +IIATPGR++
Sbjct: 345 TDLARNPDIIIATPGRLM 362
>UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 784
Score = 113 bits (271), Expect = 7e-24
Identities = 55/151 (36%), Positives = 92/151 (60%), Gaps = 5/151 (3%)
Frame = +3
Query: 420 RGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIP 599
+G F+ L +L I + G++ P+PIQ +IP+ L G+DV+A AK G+GKTG + IP
Sbjct: 36 KGGGFQAMGLSMPILKAILKMGYKVPTPIQRKTIPLILEGRDVVAMAKTGSGKTGCFLIP 95
Query: 600 VLEQVDPK--KDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 773
+ E++ + K +AL++ PTRELA+QT + +L K TD++ ++ GG ++ I
Sbjct: 96 LFEKLKQREIKSGARALVLTPTRELAIQTFKFIKQLGKFTDLKTILVLGGDSMDSQFAAI 155
Query: 774 YQNVQVIIATPGRMIDL---MDKQVARMDQC 857
+ +I+ATPGR + L MD +++ + C
Sbjct: 156 HTLPDIIVATPGRFLHLCVEMDLKLSSVQYC 186
>UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase drs1 - Schizosaccharomyces pombe (Fission
yeast)
Length = 754
Score = 113 bits (271), Expect = 7e-24
Identities = 58/147 (39%), Positives = 89/147 (60%), Gaps = 3/147 (2%)
Frame = +3
Query: 396 KTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTG 575
K + T + F+ L R +L G+ G+E P+ IQ+ +IP+AL GKD++ A G+G
Sbjct: 249 KEKSMMTTTHSSFQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLGKDIVGAAVTGSG 308
Query: 576 KTGAYCIPVLEQV--DPKK-DTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGT 746
KT A+ +P+LE++ PKK T + LI+ PTRELA+Q + ++A TDI V + GG
Sbjct: 309 KTAAFIVPILERLLYRPKKVPTTRVLILCPTRELAMQCHSVATKIASFTDIMVCLCIGGL 368
Query: 747 NLRDDIMRIYQNVQVIIATPGRMIDLM 827
+L+ + + ++IATPGR ID M
Sbjct: 369 SLKLQEQELRKRPDIVIATPGRFIDHM 395
>UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE;
n=3; Nitrosomonadaceae|Rep: RhlE; ATP-dependent RNA
helicase RhlE - Nitrosomonas europaea
Length = 498
Score = 112 bits (270), Expect = 1e-23
Identities = 55/155 (35%), Positives = 92/155 (59%), Gaps = 8/155 (5%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F + L E+L + ++G+ P+PIQ IP L+GKDV+A A+ GTGKT + +P+L +
Sbjct: 7 FAQLGLSSEILHAVNDEGYVNPTPIQAQVIPSILAGKDVMASAQTGTGKTAGFTLPLLYR 66
Query: 612 --------VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIM 767
V P + ++ALI+ PTRELA+Q + + K+ +R V GG N+ I
Sbjct: 67 LQAYANTSVSPARHPVRALIMAPTRELAMQIDESVRKYGKYLALRTAVVFGGINIEPQIA 126
Query: 768 RIYQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+ V++++ATPGR++DL++++ + +LVL
Sbjct: 127 ALQAGVEILVATPGRLLDLVEQKAVNFSKTEILVL 161
>UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable
ATP-dependent RNA helicase - Lentisphaera araneosa
HTCC2155
Length = 482
Score = 112 bits (270), Expect = 1e-23
Identities = 61/149 (40%), Positives = 88/149 (59%), Gaps = 1/149 (0%)
Frame = +3
Query: 429 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 608
+F++ LK+ +L I+ G++KP+PIQ S+ I L G+D L RAK GTGKT A+ IP L+
Sbjct: 6 QFQDLGLKKTILSAIYTAGYKKPTPIQNKSLKIILQGQDALVRAKTGTGKTAAFAIPALQ 65
Query: 609 QVDPKKDTIQALIVVPTRELALQTSQICIELAKHTD-IRVMVTTGGTNLRDDIMRIYQNV 785
+ + Q LI+ P REL Q SQ I+L K + RV TGG L + +
Sbjct: 66 HLRAEVQHPQVLILTPGRELCKQISQEFIKLGKGLENFRVAEVTGGGKL-SGVKKSLHGA 124
Query: 786 QVIIATPGRMIDLMDKQVARMDQCRMLVL 872
QVI ATPGR+ID+ ++ + + MLV+
Sbjct: 125 QVISATPGRLIDIKEQGLLNSNCINMLVI 153
>UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=13; Bacteroidetes|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family protein - Dokdonia
donghaensis MED134
Length = 638
Score = 112 bits (269), Expect = 1e-23
Identities = 58/149 (38%), Positives = 90/149 (60%), Gaps = 2/149 (1%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALS-GKDVLARAKNGTGKTGAYCIPVLE 608
F++ L LL I + G+E PS IQE +IP L+ +D++A A+ GTGKT A+ P+L+
Sbjct: 3 FDQLGLNAPLLQAIADMGFETPSKIQEEAIPQLLAEDRDMVALAQTGTGKTAAFGFPLLQ 62
Query: 609 QVDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGGTNLRDDIMRIYQNV 785
+D T Q LI+ PTREL LQ + AKH +RV+ GG+N+++ I +
Sbjct: 63 NIDASSKTTQGLIIAPTRELCLQITNEMKLYAKHIKGVRVVAVYGGSNIQEQAREISRGA 122
Query: 786 QVIIATPGRMIDLMDKQVARMDQCRMLVL 872
Q+++ATPGRM D+M +++ + + VL
Sbjct: 123 QIVVATPGRMQDMMRRRMVDITKLSYCVL 151
>UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA
helicase SA1885; n=13; Staphylococcus|Rep: Probable
DEAD-box ATP-dependent RNA helicase SA1885 -
Staphylococcus aureus (strain N315)
Length = 506
Score = 112 bits (269), Expect = 1e-23
Identities = 53/147 (36%), Positives = 94/147 (63%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F+E + + + G+++P+PIQ+ SIP AL G D+L +A+ GTGKTGA+ IP++E+
Sbjct: 4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPLIEK 63
Query: 612 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQV 791
V K+ +Q+LI+ PTRELA+Q ++ E ++ ++V+ GG + I + + Q+
Sbjct: 64 VVGKQG-VQSLILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGMPIERQIKALKKGPQI 122
Query: 792 IIATPGRMIDLMDKQVARMDQCRMLVL 872
++ TPGR+ID ++++ + D L+L
Sbjct: 123 VVGTPGRVIDHLNRRTLKTDGIHTLIL 149
>UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog;
n=20; Pasteurellaceae|Rep: Cold-shock DEAD box protein A
homolog - Haemophilus influenzae
Length = 613
Score = 112 bits (269), Expect = 1e-23
Identities = 53/148 (35%), Positives = 86/148 (58%), Gaps = 1/148 (0%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F + L +L + + G+E PSPIQ++ IP L+G DVL A+ G+GKT A+ +P+L Q
Sbjct: 7 FNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLNGNDVLGMAQTGSGKTAAFALPLLAQ 66
Query: 612 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTD-IRVMVTTGGTNLRDDIMRIYQNVQ 788
+DP + Q L++ PTRELA+Q + C K+ R++ GG + + Q Q
Sbjct: 67 IDPSEKHPQMLVMAPTRELAIQVADACELFVKYAQGTRIVTLYGGQRYDIQLRALKQGAQ 126
Query: 789 VIIATPGRMIDLMDKQVARMDQCRMLVL 872
V++ TPGR++D + + + + R +VL
Sbjct: 127 VVVGTPGRILDHIRRGTLNLSELRFIVL 154
>UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
LD28101p - Nasonia vitripennis
Length = 782
Score = 111 bits (268), Expect = 2e-23
Identities = 55/150 (36%), Positives = 93/150 (62%), Gaps = 2/150 (1%)
Frame = +3
Query: 381 KDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARA 560
K+ + K ++ G F+ L + ++ GI ++G++ P+PIQ +IPIAL G+DV+A A
Sbjct: 24 KENKKKAGKKSNKSGG-FQSMGLSQSVIRGILKRGYKIPTPIQRKTIPIALDGRDVVAMA 82
Query: 561 KNGTGKTGAYCIPVLEQVDPK--KDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVT 734
+ G+GKT + IP+ E++ + K +ALI+ PTRELALQT + E+ + T ++ V
Sbjct: 83 RTGSGKTACFLIPMFEKLKTRQAKTGARALILSPTRELALQTQRFIKEIGRFTGLKSSVI 142
Query: 735 TGGTNLRDDIMRIYQNVQVIIATPGRMIDL 824
GG ++ + I+ N +I+ATPGR + +
Sbjct: 143 LGGDSMDNQFSAIHGNPDIIVATPGRFLHI 172
>UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Rhodopirellula baltica
Length = 452
Score = 111 bits (268), Expect = 2e-23
Identities = 57/151 (37%), Positives = 90/151 (59%), Gaps = 2/151 (1%)
Frame = +3
Query: 426 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 605
+ F+E L + + + G+ PSPIQ A IP AL+GKDV+ +A+ GTGKT A+ IP+L
Sbjct: 44 DSFDELDLSPIMRRAVKDAGFTTPSPIQAALIPHALNGKDVIGQARTGTGKTAAFSIPIL 103
Query: 606 EQVDPKKD--TIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQ 779
EQ+D +D QA+++VPTRELA Q + LA+ + V +GG N+ + ++
Sbjct: 104 EQLDSLEDCRDPQAIVIVPTRELADQVAAEAERLARGVPTEIAVLSGGKNMNRQLRQLEN 163
Query: 780 NVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
Q+++ TPGR+ D + + R + +VL
Sbjct: 164 GTQLVVGTPGRVHDHLQRGTLRTNNVWCVVL 194
>UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: ATP-dependent RNA helicase, DEAD box family
- Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 430
Score = 111 bits (268), Expect = 2e-23
Identities = 55/148 (37%), Positives = 91/148 (61%)
Frame = +3
Query: 429 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 608
EF++ L LL + + G+E P+PIQ+ +IP+ L G +++ +A GTGKT AY +PVL+
Sbjct: 3 EFKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVLQ 62
Query: 609 QVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQ 788
++ K Q LIV PTRELALQ + +L K+ +R + GG + I + Q V+
Sbjct: 63 RIQRGKKA-QVLIVTPTRELALQVADEVAKLGKYLKVRALAVYGGQAIERQIRGLRQGVE 121
Query: 789 VIIATPGRMIDLMDKQVARMDQCRMLVL 872
VI+ TPGR++D + ++ + ++++L
Sbjct: 122 VIVGTPGRILDHIGRKTFPAAEIKIVIL 149
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 111 bits (268), Expect = 2e-23
Identities = 52/153 (33%), Positives = 93/153 (60%), Gaps = 4/153 (2%)
Frame = +3
Query: 426 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 605
+ F E L EL + G+E+P+PIQ +IP+ L G D+LA A+ GTGKT ++ +P++
Sbjct: 4 SSFAELALCPELQFTLKNLGYEQPTPIQSQAIPLVLRGDDLLAEAQTGTGKTASFALPII 63
Query: 606 EQVDPKK----DTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 773
E++ ++AL++ PTRELA+Q + +E + +RV+ GG + + I R+
Sbjct: 64 EKLSKNPIDGYRPVRALVLAPTRELAIQVADNTLEYGRDLGMRVISVYGGVPVENQIKRL 123
Query: 774 YQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+ +++ATPGR++DL+ ++ +++ LVL
Sbjct: 124 KRGTDILVATPGRLLDLLRQKAISLEKLEYLVL 156
>UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Clostridiaceae|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 549
Score = 111 bits (268), Expect = 2e-23
Identities = 53/149 (35%), Positives = 96/149 (64%)
Frame = +3
Query: 426 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 605
N+F + + E+ + + +P+P+Q +IP L+ +DV+A+A+ GTGKT A+ +P+L
Sbjct: 3 NKFAKLGISEEIENVLNKSDITEPTPVQLQAIPPLLAQRDVMAQAQTGTGKTLAFILPIL 62
Query: 606 EQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNV 785
E+V+ +K TIQALI+ PTRELA+Q + +LA+ I ++ GG ++ + ++ ++
Sbjct: 63 ERVNVEKPTIQALIITPTRELAIQITAETKKLAEVKGINILAAYGGQDVEQQLRKLKGSI 122
Query: 786 QVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+II TPGR++D + ++ + + MLVL
Sbjct: 123 HIIIGTPGRLLDHLRRKTINLGKLSMLVL 151
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 111 bits (268), Expect = 2e-23
Identities = 53/148 (35%), Positives = 90/148 (60%), Gaps = 1/148 (0%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGK-DVLARAKNGTGKTGAYCIPVLE 608
F+ L E+L + +KG+ P+PIQE +IPI + GK D++ +A+ GTGKT A+ IP+LE
Sbjct: 4 FKNLGLSDEILEALEKKGFTTPTPIQEQAIPILIEGKRDIVGQAQTGTGKTAAFGIPILE 63
Query: 609 QVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQ 788
+D QALI+ PTRELA+Q ++ + + V GG ++ I + + VQ
Sbjct: 64 TIDESSRNTQALILAPTRELAIQVAEEIDSIKGSKRLNVFPVYGGQSIDRQIRELRRGVQ 123
Query: 789 VIIATPGRMIDLMDKQVARMDQCRMLVL 872
+++ TPGR++D + ++ +++ +VL
Sbjct: 124 IVVGTPGRILDHISRRTIKLENVSYVVL 151
>UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;
Eukaryota|Rep: ATP-dependent RNA helicase DDX54 - Homo
sapiens (Human)
Length = 881
Score = 111 bits (268), Expect = 2e-23
Identities = 54/167 (32%), Positives = 93/167 (55%), Gaps = 2/167 (1%)
Frame = +3
Query: 375 PPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLA 554
P ++ + + F+ L + GI +KG++ P+PIQ +IP+ L GKDV+A
Sbjct: 79 PDTREMVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVA 138
Query: 555 RAKNGTGKTGAYCIPVLEQV--DPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVM 728
A+ G+GKT + +P+ E++ + +ALI+ PTRELALQT + EL K T ++
Sbjct: 139 MARTGSGKTACFLLPMFERLKTHSAQTGARALILSPTRELALQTLKFTKELGKFTGLKTA 198
Query: 729 VTTGGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVARMDQCRMLV 869
+ GG + D +++N +IIATPGR++ + + ++ +V
Sbjct: 199 LILGGDRMEDQFAALHENPDIIIATPGRLVHVAVEMSLKLQSVEYVV 245
>UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellular
organisms|Rep: ATP-dependent RNA helicase -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 778
Score = 111 bits (267), Expect = 2e-23
Identities = 55/148 (37%), Positives = 91/148 (61%), Gaps = 1/148 (0%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F + L LL + E G+E PSPIQ A+IP+ L+ +DVL +A+ GTGKT ++ +P+L +
Sbjct: 9 FADLKLSEPLLRVLQELGYESPSPIQAATIPLLLNNRDVLGQAQTGTGKTASFALPILAR 68
Query: 612 VDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGGTNLRDDIMRIYQNVQ 788
+D K+ T QAL++ PTRELA+Q ++ A + V+ GG + + + + V
Sbjct: 69 IDIKQTTPQALVLAPTRELAIQVAEAFQRYATYIPGFHVLPIYGGQSYGAQLSALRRGVH 128
Query: 789 VIIATPGRMIDLMDKQVARMDQCRMLVL 872
V++ TPGR+ID ++K + + + +VL
Sbjct: 129 VVVGTPGRVIDHLEKGSLDLSRIKTMVL 156
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 111 bits (267), Expect = 2e-23
Identities = 56/149 (37%), Positives = 90/149 (60%), Gaps = 2/149 (1%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
+ + L E+ + + +PSPIQ A IP+AL G+DVL +A+ GTGKT A+ IP++E+
Sbjct: 6 YADMALSVEMKAALEAARYIQPSPIQAAIIPLALEGRDVLGQARTGTGKTAAFGIPIIER 65
Query: 612 VD--PKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNV 785
++ P QALI+ PTRELA+Q +L I V+ GG LR + ++ +
Sbjct: 66 LEHGPNSRNPQALILTPTRELAVQVRDEIAKLTHGQRINVVAVYGGKPLRSQMEKLKRAP 125
Query: 786 QVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+++ TPGR+IDLM ++ +++ R +VL
Sbjct: 126 HIVVGTPGRVIDLMTRRALQLEMLRTVVL 154
>UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Algoriphagus sp. PR1|Rep: DEAD/DEAH box helicase-like
protein - Algoriphagus sp. PR1
Length = 399
Score = 111 bits (267), Expect = 2e-23
Identities = 56/147 (38%), Positives = 86/147 (58%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F L ++ + EKG+E + IQE SI L G+D+L + G+GKTGA+ IP++E
Sbjct: 57 FASLSLDSVMMRNLSEKGYENMTNIQEQSIEALLEGRDLLGISNTGSGKTGAFLIPIIEH 116
Query: 612 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQV 791
ALIV PTRELALQ Q L+K + GGTN+ D+ + + + V
Sbjct: 117 ALKNPGQFTALIVTPTRELALQIDQEFKSLSKGMRLHSATFIGGTNINTDMKVLSRKLHV 176
Query: 792 IIATPGRMIDLMDKQVARMDQCRMLVL 872
I+ TPGR++DL ++++ +++Q + LVL
Sbjct: 177 IVGTPGRLLDLTNRKLLKLNQVKTLVL 203
>UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_139_12217_14094 - Giardia lamblia
ATCC 50803
Length = 625
Score = 111 bits (267), Expect = 2e-23
Identities = 62/146 (42%), Positives = 90/146 (61%), Gaps = 4/146 (2%)
Frame = +3
Query: 447 LKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPK- 623
L R+L + GW+ P+ +QE IPI L+G+D L A G+GKTGA+ IP+LE++ +
Sbjct: 8 LSRQLTRAVLRLGWKFPTTVQEKVIPIVLAGRDALVSAVTGSGKTGAFGIPLLERMILRG 67
Query: 624 KDT--IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVII 797
+DT ALI+ PTRELA QT+ + ELA T+ RV + GGT+ ++ +I+
Sbjct: 68 RDTYGTTALILSPTRELAAQTAAVLQELAYFTNFRVYLLIGGTDTAKQAAQLRTEPDIIV 127
Query: 798 ATPGRMIDLMDKQV-ARMDQCRMLVL 872
ATPGR+IDL+ V +D +LVL
Sbjct: 128 ATPGRLIDLVRNTVNFSLDTIEVLVL 153
>UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=37;
Bilateria|Rep: Eukaryotic initiation factor 4A-II - Homo
sapiens (Human)
Length = 407
Score = 111 bits (267), Expect = 2e-23
Identities = 52/150 (34%), Positives = 92/150 (61%), Gaps = 1/150 (0%)
Frame = +3
Query: 426 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 605
+ F++ LK LL GI+ G+EKPS IQ+ +I + G DV+A+A++GTGKT + I +L
Sbjct: 33 DNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISIL 92
Query: 606 EQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNV 785
+Q++ + QAL++ PTRELA Q ++ + L + GGTN+R+++ ++
Sbjct: 93 QQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEA 152
Query: 786 -QVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+++ TPGR+ D+++++ +M VL
Sbjct: 153 PHIVVGTPGRVFDMLNRRYLSPKWIKMFVL 182
>UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-dependent
RNA helicase; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to ATP-dependent RNA helicase -
Ornithorhynchus anatinus
Length = 580
Score = 111 bits (266), Expect = 3e-23
Identities = 52/150 (34%), Positives = 88/150 (58%), Gaps = 2/150 (1%)
Frame = +3
Query: 375 PPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLA 554
P ++ + + F+ L + G+ +KG++ P+PIQ +IP+ L GKDV+A
Sbjct: 133 PDTRELVRVQNKKKKKSGGFQSMGLSYPVFKGVMKKGYKVPTPIQRKTIPVILDGKDVVA 192
Query: 555 RAKNGTGKTGAYCIPVLEQV--DPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVM 728
A+ G+GKT + IP+ E++ + +AL++ PTRELALQT + EL K T +++
Sbjct: 193 MARTGSGKTACFLIPMFEKLKAHSAQAGARALVLSPTRELALQTGKFTKELGKFTGLKMA 252
Query: 729 VTTGGTNLRDDIMRIYQNVQVIIATPGRMI 818
+ GG + D +++N +IIATPGR++
Sbjct: 253 LILGGDRMEDQFAALHENPDIIIATPGRLM 282
>UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box
helicase, n-terminal; n=3; Bacteria|Rep: HeliCase,
c-terminal:dead/deah box helicase, n-terminal -
Stigmatella aurantiaca DW4/3-1
Length = 608
Score = 111 bits (266), Expect = 3e-23
Identities = 56/157 (35%), Positives = 92/157 (58%), Gaps = 3/157 (1%)
Frame = +3
Query: 411 TDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAY 590
T N FE L L+ + G+E+P+PIQ A++P L GKD+L A GTGKT A+
Sbjct: 31 TSAADNTFESLGLLPPLVEALSALGYEEPTPIQRAALPPLLEGKDLLGIAATGTGKTAAF 90
Query: 591 CIPVLEQVDPKKD---TIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDD 761
+P+L+++ P T AL++VPTRELA+Q ++ + I V+ GG +
Sbjct: 91 SLPLLQRITPGAHAPFTASALVLVPTRELAMQVAEAIHRYGQKLGISVVPLYGGQVISQQ 150
Query: 762 IMRIYQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+ + + V V++ATPGR +D + ++ +++Q R++VL
Sbjct: 151 LRVLKRGVDVVVATPGRALDHLQRKTLKLEQVRVVVL 187
>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
Bdellovibrio bacteriovorus
Length = 505
Score = 110 bits (265), Expect = 4e-23
Identities = 55/150 (36%), Positives = 91/150 (60%), Gaps = 1/150 (0%)
Frame = +3
Query: 426 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 605
NEF L ELL + E G+E +PIQ+ SIP+ L+GKD++ +AK G+GKT A+ +P+L
Sbjct: 47 NEFSTLPLSPELLTVVQELGFETLTPIQQESIPLLLAGKDIIGQAKTGSGKTAAFSLPIL 106
Query: 606 EQVDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGGTNLRDDIMRIYQN 782
+++ + +QALI+ PTRELA Q +L + ++V+ TGG + R+ +
Sbjct: 107 NKINLDQPLLQALILCPTRELASQVVTEIRKLGRRLPGLKVLAMTGGQSGREQADALENG 166
Query: 783 VQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
VQ+++ TPGR+ D + + + + +VL
Sbjct: 167 VQIVVGTPGRLADFVGRNRIDLSAVKTVVL 196
>UniRef50_Q9S531 Cluster: DEAD-box protein; n=4;
Cystobacterineae|Rep: DEAD-box protein - Myxococcus
xanthus
Length = 808
Score = 110 bits (265), Expect = 4e-23
Identities = 49/147 (33%), Positives = 89/147 (60%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F++ L + + + E+G+ P+P+Q + A+ GKD++ R+K GTGKT A+ +P+LE+
Sbjct: 31 FDDMNLSEPIRLALAERGYTNPTPVQARAFRPAIEGKDLIVRSKTGTGKTAAFGLPLLEK 90
Query: 612 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQV 791
+ + ++ALI+ PTRELALQ + LAKH +++ GG +++ + + +
Sbjct: 91 IPADERRVRALILCPTRELALQVADELKMLAKHKGLKIAAIYGGASMKQQEDALEEGTPI 150
Query: 792 IIATPGRMIDLMDKQVARMDQCRMLVL 872
I+ TPGR+ D +++ ++D C VL
Sbjct: 151 IVGTPGRVFDHINRGNLKLDACDHAVL 177
>UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3;
Clostridium difficile|Rep: ATP-dependent RNA helicase -
Clostridium difficile (strain 630)
Length = 497
Score = 110 bits (265), Expect = 4e-23
Identities = 51/147 (34%), Positives = 90/147 (61%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
FE+F L ++L + G+ PS +Q IP L G++++ R+K G+GKT ++ IP+ E
Sbjct: 5 FEKFKLNEKILKSLKSLGYNIPSRVQREVIPKLLKGQNLVVRSKTGSGKTASFAIPLCEN 64
Query: 612 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQV 791
++ + IQALIVVPTRELALQ ++ + +R G +++D I + Q V +
Sbjct: 65 INVDYNNIQALIVVPTRELALQVKDEISDIGRLKKVRCSAIFGKQSIKDQIAELKQRVHI 124
Query: 792 IIATPGRMIDLMDKQVARMDQCRMLVL 872
++ATPGR++D +++ +++ + LV+
Sbjct: 125 VVATPGRILDHINRGSIKLENVKYLVI 151
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 110 bits (265), Expect = 4e-23
Identities = 53/151 (35%), Positives = 91/151 (60%), Gaps = 4/151 (2%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F + L +L I ++G+ +PS IQ +IP L G+DV+A A+ GTGKT + +P+LE
Sbjct: 7 FNKLGLSAPILKAIEDQGYTEPSAIQAQAIPAILEGQDVMAAAQTGTGKTAGFTLPLLEI 66
Query: 612 V----DPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQ 779
+ + + + ++AL++ PTRELA Q ++ +H ++ V GG + +M + +
Sbjct: 67 LSKGENAQSNQVRALVLTPTRELAAQVAESVKNYGQHLSLKSTVVFGGVKINPQMMALRR 126
Query: 780 NVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
++IATPGRM+DL +++ R D+ +LVL
Sbjct: 127 GADILIATPGRMMDLYNQKAVRFDKLEVLVL 157
>UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 871
Score = 110 bits (265), Expect = 4e-23
Identities = 52/147 (35%), Positives = 93/147 (63%), Gaps = 1/147 (0%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
+++ L + I +KG+ +P+PIQ +IP + GKDV+A ++ G+GKT A+ IP+L++
Sbjct: 26 WQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQK 85
Query: 612 VDPKKDT-IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQ 788
+ + T I+AL+V PTRELALQT ++ EL + T +R GG + + I++N
Sbjct: 86 LKRRDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEEQFSTIHENPD 145
Query: 789 VIIATPGRMIDLMDKQVARMDQCRMLV 869
+++ATPGR++ ++ + R+ + +V
Sbjct: 146 ILLATPGRLLHVIVEMDLRLSYVQYVV 172
>UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;
n=8; Viridiplantae|Rep: DEAD-box ATP-dependent RNA
helicase 21 - Arabidopsis thaliana (Mouse-ear cress)
Length = 733
Score = 110 bits (265), Expect = 4e-23
Identities = 56/155 (36%), Positives = 95/155 (61%), Gaps = 8/155 (5%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
+EE L ELL + G++KPSPIQ A+IP+ L +DV+ A+ G+GKT A+ +P+L
Sbjct: 315 WEESKLTSELLKAVERAGYKKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLAY 374
Query: 612 VD---PKKDTIQ-----ALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIM 767
+ P + + A+++ PTRELA Q + ++ A + RV GG ++ + +
Sbjct: 375 ISRLPPMSEENETEGPYAVVMAPTRELAQQIEEETVKFAHYLGFRVTSIVGGQSIEEQGL 434
Query: 768 RIYQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+I Q +++IATPGR+ID ++++ A ++QC +VL
Sbjct: 435 KITQGCEIVIATPGRLIDCLERRYAVLNQCNYVVL 469
>UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp10 - Schizosaccharomyces pombe (Fission
yeast)
Length = 848
Score = 110 bits (265), Expect = 4e-23
Identities = 63/189 (33%), Positives = 102/189 (53%), Gaps = 2/189 (1%)
Frame = +3
Query: 264 TENRISSSNHVGNSISQTKGEVDKSIDDVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEEF 443
T+N+ +VG ++S +D G K+ +RR K N F+
Sbjct: 25 TDNQKDKHENVGENVSD---------EDDGNYIASKLLESNRRTKGKKGNGKASN-FQSM 74
Query: 444 CLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDP- 620
L + LL IF+KG++ P+PIQ +IP+ L G+DV+ A+ G+GKT A+ IP++E +
Sbjct: 75 GLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMARTGSGKTAAFVIPMIEHLKST 134
Query: 621 -KKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVII 797
+ALI+ P RELALQT ++ + +K TD+R + GG +L + + +++
Sbjct: 135 LANSNTRALILSPNRELALQTVKVVKDFSKGTDLRSVAIVGGVSLEEQFSLLSGKPDIVV 194
Query: 798 ATPGRMIDL 824
ATPGR + L
Sbjct: 195 ATPGRFLHL 203
>UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 990
Score = 110 bits (264), Expect = 5e-23
Identities = 58/160 (36%), Positives = 91/160 (56%), Gaps = 1/160 (0%)
Frame = +3
Query: 396 KTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTG 575
+TSD+ F + L +++L G+ G+ KPSPIQ SIP+ G D++ RAK+GTG
Sbjct: 14 RTSDIEIQEDVTFSQMGLSQQVLNGLLNCGFHKPSPIQHKSIPLGRCGFDLIVRAKSGTG 73
Query: 576 KTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIEL-AKHTDIRVMVTTGGTNL 752
KT + I LE +D K ++Q +I+ PTRE+A+Q ++ L + ++V GG +
Sbjct: 74 KTAVFGIIALEMIDIKISSVQVIILAPTREIAIQIKEVIASLGCEIKGLKVESFIGGVAM 133
Query: 753 RDDIMRIYQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
D ++ N + I PGR+ L+DK +MD R+ VL
Sbjct: 134 DIDRKKL-SNCHIAIGAPGRVKHLIDKGYLKMDHVRLFVL 172
>UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep:
RNA helicase - Guillardia theta (Cryptomonas phi)
Length = 381
Score = 110 bits (264), Expect = 5e-23
Identities = 60/149 (40%), Positives = 99/149 (66%), Gaps = 1/149 (0%)
Frame = +3
Query: 429 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 608
+F++ LK +LL+G+ + G+E PS IQE IP+A++ KD+LAR+KNGTGKT ++ IP+L+
Sbjct: 16 KFKDLKLKNDLLLGLNDLGYEHPSLIQEKIIPLAINNKDILARSKNGTGKTLSFLIPILQ 75
Query: 609 QVDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGGTNLRDDIMRIYQNV 785
+ + I+++I+VPTRELALQ S + +L+K+ +I + VT G + + D I +
Sbjct: 76 NIYSESYGIESIILVPTRELALQISSLLRKLSKYMKNINLQVT--GVDSKIDKNNI--DF 131
Query: 786 QVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+++ TPG++ D + K C+ LVL
Sbjct: 132 NILLGTPGKIYDCLCKNEVN-KTCKTLVL 159
>UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila
melanogaster|Rep: CG6539-PA - Drosophila melanogaster
(Fruit fly)
Length = 1028
Score = 110 bits (264), Expect = 5e-23
Identities = 62/160 (38%), Positives = 96/160 (60%), Gaps = 1/160 (0%)
Frame = +3
Query: 396 KTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTG 575
++SDV + FEE L R LL G+ + P+ IQ A+IP+AL+ D++ ++K+GTG
Sbjct: 15 RSSDVAPGQVKTFEELRLYRNLLNGLKRNNFVTPTKIQAAAIPMALAKMDLIIQSKSGTG 74
Query: 576 KTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAK-HTDIRVMVTTGGTNL 752
KT Y I V++ +P + A+IVVPTRELA+Q L K D + GGT++
Sbjct: 75 KTLIYVIAVVQSFNPNINQPHAMIVVPTRELAIQVQDTFFHLCKSFRDFKCSAFIGGTDV 134
Query: 753 RDDIMRIYQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
D R+ ++ +VII TPGR++ L + +V + + R+LVL
Sbjct: 135 AKDRKRMNES-RVIIGTPGRLLHLYENRVFDVSKLRLLVL 173
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 110 bits (264), Expect = 5e-23
Identities = 53/148 (35%), Positives = 88/148 (59%), Gaps = 1/148 (0%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F + LK +L + + G+EKPSPIQ IP L+G+DVL A+ G+GKT A+ +P+L+
Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQN 67
Query: 612 VDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGGTNLRDDIMRIYQNVQ 788
+DP+ Q L++ PTRELA+Q ++ + +KH + V+ GG + + Q Q
Sbjct: 68 LDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGPQ 127
Query: 789 VIIATPGRMIDLMDKQVARMDQCRMLVL 872
+++ TPGR++D + + + + LVL
Sbjct: 128 IVVGTPGRLLDHLKRGTLDLSKLSGLVL 155
>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 624
Score = 109 bits (263), Expect = 7e-23
Identities = 51/133 (38%), Positives = 84/133 (63%), Gaps = 1/133 (0%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F+ F LL + +KG+ PSPIQ+A+ P + G+D++ +A+ GTGKT A+ +P+LE+
Sbjct: 73 FDGFGFSEALLKTLADKGYSDPSPIQKAAFPELMLGRDLVGQAQTGTGKTAAFALPLLER 132
Query: 612 VDPKKDTIQALIVVPTRELALQTS-QICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQ 788
++ + T Q L++ PTRELA+Q + A H ++V+ GGT+ R I + + V
Sbjct: 133 LESGQKTPQVLVLAPTRELAMQVADSFKAYAAGHPHLKVLAVYGGTDFRSQISTLRRGVD 192
Query: 789 VIIATPGRMIDLM 827
V++ TPGR++D M
Sbjct: 193 VVVGTPGRVMDHM 205
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 109 bits (263), Expect = 7e-23
Identities = 55/150 (36%), Positives = 88/150 (58%), Gaps = 3/150 (2%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F E L+ ELL + G+E+P+PIQ ++P ++G+D+L +A GTGKT A+ +P+L +
Sbjct: 59 FAELALRPELLRSLAALGYEEPTPIQREAVPPLVAGRDLLGQAATGTGKTAAFALPLLHR 118
Query: 612 VDPKKDTI---QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQN 782
+ + QAL++VPTRELA+Q S+ + RV+ GG + + + Q
Sbjct: 119 LTDDRTGDHGPQALVLVPTRELAVQVSEAIHRYGRDLGARVLPVYGGAPIGRQVRALVQG 178
Query: 783 VQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
V V++ATPGR +D M + R+D +VL
Sbjct: 179 VDVVVATPGRALDHMGRGTLRLDGLHTVVL 208
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 109 bits (263), Expect = 7e-23
Identities = 52/148 (35%), Positives = 89/148 (60%), Gaps = 1/148 (0%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F+ F ++ GI + G+ P+PIQE IP AL G+DV+ A+ GTGKT A+ +P+L++
Sbjct: 3 FDSFRFHPQITAGIRDLGYHTPTPIQEQVIPHALDGRDVIGIAQTGTGKTAAFVLPILQR 62
Query: 612 -VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQ 788
+ + ++A+IV PTRELA Q + L K+T +R + GG + I R+ + V+
Sbjct: 63 LMRGPRGRVRAMIVTPTRELAEQIQGVIEALGKYTGLRSVTLYGGVGYQGQIQRLRRGVE 122
Query: 789 VIIATPGRMIDLMDKQVARMDQCRMLVL 872
+ + PGR++D +++ ++ ML+L
Sbjct: 123 IAVVCPGRLLDHLERGTLTLEHLDMLIL 150
>UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA
helicase 29; n=4; core eudicotyledons|Rep: Putative
DEAD-box ATP-dependent RNA helicase 29 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 845
Score = 109 bits (263), Expect = 7e-23
Identities = 56/136 (41%), Positives = 87/136 (63%), Gaps = 2/136 (1%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
FE L + I +KG++ P+PIQ ++P+ LSG DV+A A+ G+GKT A+ IP+LE+
Sbjct: 30 FESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVDVVAMARTGSGKTAAFLIPMLEK 89
Query: 612 VDPK--KDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNV 785
+ + ++ALI+ PTR+LA QT + EL K TD+RV + GG ++ D + +
Sbjct: 90 LKQHVPQGGVRALILSPTRDLAEQTLKFTKELGKFTDLRVSLLVGGDSMEDQFEELTKGP 149
Query: 786 QVIIATPGRMIDLMDK 833
VIIATPGR++ L+ +
Sbjct: 150 DVIIATPGRLMHLLSE 165
>UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;
n=5; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 28 - Arabidopsis thaliana (Mouse-ear cress)
Length = 789
Score = 109 bits (263), Expect = 7e-23
Identities = 62/162 (38%), Positives = 95/162 (58%), Gaps = 4/162 (2%)
Frame = +3
Query: 399 TSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGK 578
T D + F E L R LL G++KP+PIQ A IP+AL+G+D+ A A G+GK
Sbjct: 158 TVDGVSFHADTFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGK 217
Query: 579 TGAYCIPVLEQV--DPKK-DTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTN 749
T A+ +P LE++ PK+ + LI+ PTRELA+Q + LA+ TDI+ + GG +
Sbjct: 218 TAAFALPTLERLLFRPKRVFATRVLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVGGLS 277
Query: 750 LRDDIMRIYQNVQVIIATPGRMID-LMDKQVARMDQCRMLVL 872
+R+ + + +++ATPGRMID L + +D +L+L
Sbjct: 278 VREQEVVLRSMPDIVVATPGRMIDHLRNSMSVDLDDLAVLIL 319
>UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1;
Mycoplasma pulmonis|Rep: ATP-DEPENDENT RNA HELICASE -
Mycoplasma pulmonis
Length = 480
Score = 109 bits (262), Expect = 9e-23
Identities = 52/132 (39%), Positives = 80/132 (60%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F + +K E+L + E G+EKP+ IQEA +P A GKD++ +A+ GTGKT A+ IP+L
Sbjct: 3 FTQMNIKSEILKSLDEIGFEKPTKIQEAVLPFAFEGKDIIGQAQTGTGKTAAFAIPILSN 62
Query: 612 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQV 791
+D + IQ L++ PTRELA Q L K+T ++ + GG + + V +
Sbjct: 63 LDCSINRIQHLVIAPTRELANQIYDQLNILGKYTCSKIALILGGVSYEKQKAALNSGVNI 122
Query: 792 IIATPGRMIDLM 827
++ATPGR+ DL+
Sbjct: 123 VVATPGRLEDLL 134
>UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=6; Vibrio|Rep: ATP-dependent RNA helicase,
DEAD box family - Vibrio parahaemolyticus
Length = 421
Score = 109 bits (262), Expect = 9e-23
Identities = 56/149 (37%), Positives = 91/149 (61%), Gaps = 2/149 (1%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F + ++++L+ + P+P+QE SIP L GKD+LA A+ GTGKT A+ +P+++
Sbjct: 9 FADLGIEQQLVETLNNMNIVTPTPVQEKSIPHVLEGKDLLAAAQTGTGKTAAFGLPIIQA 68
Query: 612 VDPKK--DTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNV 785
V KK T ALI+VPTRELA Q + A+HTD+R++ GGT++ ++ +
Sbjct: 69 VQQKKRNGTPHALILVPTRELAQQVFDNLTQYAEHTDLRIVCVYGGTSIGVQKNKLEEGA 128
Query: 786 QVIIATPGRMIDLMDKQVARMDQCRMLVL 872
++IATPGR++D + + + +LVL
Sbjct: 129 DILIATPGRLLDHLFNGNVNISKTGVLVL 157
>UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_03001730;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001730 - Ferroplasma acidarmanus fer1
Length = 430
Score = 109 bits (261), Expect = 1e-22
Identities = 51/128 (39%), Positives = 86/128 (67%), Gaps = 1/128 (0%)
Frame = +3
Query: 492 KPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDP-KKDTIQALIVVPTREL 668
+P+ IQE +IP+ L+GKDV+ R+K G+GKT AY +PVL V+ K +++A+I++PTREL
Sbjct: 18 EPTEIQEKAIPVVLTGKDVIIRSKTGSGKTAAYLLPVLNSVEKLKGKSVKAIIILPTREL 77
Query: 669 ALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVARM 848
ALQT ++ L K + I+ + GG ++ + + ++I TPGR++DL +++ ++
Sbjct: 78 ALQTHRVASRLGKISGIKSTIVYGGASIIRQVEEL-PGSDIVIGTPGRILDLYNQKYLKL 136
Query: 849 DQCRMLVL 872
D + LVL
Sbjct: 137 DHVKYLVL 144
>UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35;
Vibrionales|Rep: ATP-dependent RNA helicase DeaD -
Vibrio cholerae
Length = 663
Score = 109 bits (261), Expect = 1e-22
Identities = 48/149 (32%), Positives = 89/149 (59%), Gaps = 1/149 (0%)
Frame = +3
Query: 429 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 608
+F + L +L + E G+ P+PIQ A+IP+ L G+D L +A+ GTGKT A+ +P+L
Sbjct: 27 QFSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLN 86
Query: 609 QVDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGGTNLRDDIMRIYQNV 785
+++ + QA+++ PTRELA+Q + L ++ ++V+ GG ++ D + +
Sbjct: 87 KLNLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKSGA 146
Query: 786 QVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+++ TPGR+ DL+ + +D+C +L
Sbjct: 147 HIVVGTPGRVKDLITRDRLHLDECHTFIL 175
>UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=2;
Aurantimonadaceae|Rep: Superfamily II DNA and RNA
helicase - Fulvimarina pelagi HTCC2506
Length = 457
Score = 109 bits (261), Expect = 1e-22
Identities = 57/152 (37%), Positives = 92/152 (60%), Gaps = 5/152 (3%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F+ F L L + P+PIQE +IP AL+G+D+L A+ GTGKT A+ +P+L
Sbjct: 6 FDGFGLAEPLTRALARLELTTPTPIQERAIPHALAGRDMLGIAQTGTGKTAAFALPLLHH 65
Query: 612 V-----DPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIY 776
+ P T +ALI+ PTRELA+Q ++ +L++ T I V GG ++R I +
Sbjct: 66 LMTVGGKPTTRTTKALILSPTRELAVQIAESIADLSEGTPISHCVVFGGVSVRPQIQALA 125
Query: 777 QNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+ V +++ATPGR++DLM+++ + + R L+L
Sbjct: 126 RGVDILVATPGRLLDLMEQRAIDLRETRHLIL 157
>UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Cystobacterineae|Rep: DEAD/DEAH box helicase domain
protein - Anaeromyxobacter sp. Fw109-5
Length = 455
Score = 109 bits (261), Expect = 1e-22
Identities = 57/147 (38%), Positives = 86/147 (58%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F E L E L + G+E P+PIQ +IP AL+GKDV+ A GTGKT A+ +P++++
Sbjct: 6 FAELHLSPEALAALRRAGFEHPTPIQAQAIPPALAGKDVIGTAATGTGKTAAFLLPLIDR 65
Query: 612 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQV 791
+ K T +AL++ PTRELALQ + +R V GG + + Q ++
Sbjct: 66 LAGKPGT-RALVLAPTRELALQIGEELERFGHARRVRGAVIIGGVGMAQQAEALRQKREI 124
Query: 792 IIATPGRMIDLMDKQVARMDQCRMLVL 872
+IATPGR++D +++ AR+D LVL
Sbjct: 125 VIATPGRLVDHLEQGNARLDGIEALVL 151
>UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DRS1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 752
Score = 109 bits (261), Expect = 1e-22
Identities = 64/190 (33%), Positives = 102/190 (53%), Gaps = 5/190 (2%)
Frame = +3
Query: 318 KGEVDKSIDDVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKP 497
KG D ID+ + K + + F L R +L G+ G+ KP
Sbjct: 195 KGGKDDEIDEEDDSEEAKADFYAPETEGDEAKKQMYENFNSLSLSRPVLKGLASLGYVKP 254
Query: 498 SPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV--DPKK-DTIQALIVVPTREL 668
SPIQ A+IPIAL GKD++A A G+GKT A+ IP++E++ P K + + ++++PTREL
Sbjct: 255 SPIQSATIPIALLGKDIIAGAVTGSGKTAAFMIPIIERLLYKPAKIASTRVIVLLPTREL 314
Query: 669 ALQTSQICIELAKH-TDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMID-LMDKQVA 842
A+Q + + ++A+ + I + GG NLR + ++IATPGR ID + +
Sbjct: 315 AIQVADVGKQIARFVSGITFGLAVGGLNLRQQEQMLKSRPDIVIATPGRFIDHIRNSASF 374
Query: 843 RMDQCRMLVL 872
+D +LV+
Sbjct: 375 NVDSVEILVM 384
>UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1;
Mesoplasma florum|Rep: ATP-dependent RNA helicase -
Mesoplasma florum (Acholeplasma florum)
Length = 666
Score = 108 bits (260), Expect = 2e-22
Identities = 49/148 (33%), Positives = 98/148 (66%), Gaps = 1/148 (0%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F+E L ++L+ + + + + + IQ +IP+ L GK++ ++ GTGKT ++ +P+LE+
Sbjct: 3 FKELQLSDKVLVALEKANFNEATEIQARAIPLFLEGKNIFGKSSTGTGKTASFVLPILEK 62
Query: 612 VDPKKDTIQALIVVPTRELALQ-TSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQ 788
++P K +QA+I+ PTRELA+Q +QI I ++ ++ + GG ++RD I R+ ++ Q
Sbjct: 63 IEPNKRRVQAVIMAPTRELAMQIVNQIRIFGSRIENLVIAPLIGGADMRDQIKRL-KDSQ 121
Query: 789 VIIATPGRMIDLMDKQVARMDQCRMLVL 872
+++ TPGR+ D ++++ ++D R ++L
Sbjct: 122 IVVGTPGRVNDHLNRKTLKLDDVRTIIL 149
>UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1;
uncultured candidate division OP8 bacterium|Rep:
Putative uncharacterized protein - uncultured candidate
division OP8 bacterium
Length = 453
Score = 108 bits (260), Expect = 2e-22
Identities = 58/148 (39%), Positives = 85/148 (57%), Gaps = 1/148 (0%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F L LL + E G+ +P+PIQ +IP A+SG+DV+A A G+GKT A+ +P+L Q
Sbjct: 3 FSSLHLHPTLLKALKELGFPRPTPIQADAIPPAMSGRDVMASAVTGSGKTAAFLLPILHQ 62
Query: 612 -VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQ 788
+D + T +AL++ PTRELA Q + +LA HT I GG ++R + V
Sbjct: 63 LIDRPRGTTRALVITPTRELAAQILEDLNDLAVHTPISAAAVFGGVSIRPQEHAFRRGVD 122
Query: 789 VIIATPGRMIDLMDKQVARMDQCRMLVL 872
V+I TPGR++D A++ LVL
Sbjct: 123 VLIGTPGRLLDHFRAPYAKLAGLEHLVL 150
>UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 763
Score = 108 bits (260), Expect = 2e-22
Identities = 57/140 (40%), Positives = 86/140 (61%), Gaps = 4/140 (2%)
Frame = +3
Query: 414 DTRGN-EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAY 590
DT N FE+ L R++L G+ P+PIQ+A IP+AL+GKD+ A A GTGKT A+
Sbjct: 143 DTSVNVSFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAF 202
Query: 591 CIPVLEQV--DPK-KDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDD 761
+P+LE++ PK + L++VPTRELA+Q Q+ +L+ + V + GG +L+
Sbjct: 203 VLPILERMIYRPKGASCTRVLVLVPTRELAIQVFQVFRKLSTFIQLEVCLCAGGLDLKAQ 262
Query: 762 IMRIYQNVQVIIATPGRMID 821
+ V++ATPGR+ID
Sbjct: 263 EAALRSGPDVVVATPGRLID 282
>UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 643
Score = 108 bits (260), Expect = 2e-22
Identities = 53/155 (34%), Positives = 94/155 (60%), Gaps = 4/155 (2%)
Frame = +3
Query: 381 KDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARA 560
KD + ++ + +F +F + + L G+ + G+ P+ IQ+ IP+ALSG+DVL A
Sbjct: 35 KDLEDRCKEIGSSEVEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAA 94
Query: 561 KNGTGKTGAYCIPVLEQVDPKK----DTIQALIVVPTRELALQTSQICIELAKHTDIRVM 728
K G+GKT A+ IP++E + +K D + AL++ PTRELA QT ++ +++ D+
Sbjct: 95 KTGSGKTLAFLIPIIETLWRQKWTSMDGLGALVISPTRELAYQTFEVLVKIGNKHDLSAG 154
Query: 729 VTTGGTNLRDDIMRIYQNVQVIIATPGRMIDLMDK 833
+ GG +L+++ RI +++ TPGR++ MD+
Sbjct: 155 LIIGGKDLKNEQKRI-MKTNIVVCTPGRLLQHMDE 188
>UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=20;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 418
Score = 108 bits (259), Expect = 2e-22
Identities = 58/155 (37%), Positives = 96/155 (61%), Gaps = 6/155 (3%)
Frame = +3
Query: 426 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 605
N F E L L + + G+ P+PIQ+ +IP L G+DVLA A+ GTGKT AY +P++
Sbjct: 3 NTFIELGLDSSLSDHLSQLGFNTPTPIQQQAIPHLLQGRDVLAAAQTGTGKTAAYGLPLI 62
Query: 606 EQVD--PKKDTI----QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIM 767
+ + +++T +ALI+ PTRELA Q + A+HT++ ++ GGT++R
Sbjct: 63 QMLSRQSREETAPKHPRALILAPTRELAQQVFDNLKQYAQHTELAIVTVYGGTSIRVQQE 122
Query: 768 RIYQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
++ + V ++IATPGR++D + + ++Q +MLVL
Sbjct: 123 QLAKGVDILIATPGRLLDHLFTKKTSLNQLQMLVL 157
>UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=3;
Thermus thermophilus|Rep: Heat resistant RNA dependent
ATPase - Thermus thermophilus
Length = 510
Score = 107 bits (258), Expect = 3e-22
Identities = 54/151 (35%), Positives = 92/151 (60%), Gaps = 3/151 (1%)
Frame = +3
Query: 429 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 608
EF++F LK E+L + +G P+PIQ A++P+AL GKD++ +A+ GTGKT A+ +P+ E
Sbjct: 2 EFKDFPLKPEILEALHGRGLTTPTPIQAAALPLALEGKDLIGQARTGTGKTLAFALPIAE 61
Query: 609 QVDPKKD---TIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQ 779
++ P ++ +AL++ PTRELALQ + +A H ++V+ GGT + +
Sbjct: 62 RLAPSQERGRKPRALVLTPTRELALQVASELTAVAPH--LKVVAVYGGTGYGKQKEALLR 119
Query: 780 NVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
++ATPGR +D + + V + + + VL
Sbjct: 120 GADAVVATPGRALDYLRQGVLDLSRVEVAVL 150
>UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 387
Score = 107 bits (258), Expect = 3e-22
Identities = 48/130 (36%), Positives = 83/130 (63%)
Frame = +3
Query: 483 GWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTR 662
G+ P+PIQE +IP+ L GKD++A + GTGKT AY IP+L ++DP+ +QA+I+ P+
Sbjct: 29 GFTAPTPIQEEAIPLILEGKDLIAESPTGTGKTLAYLIPILHRIDPESKAVQAVILAPSH 88
Query: 663 ELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVA 842
ELA+Q Q + K +I GG N++ I + + Q+I+AT GR+++++ +
Sbjct: 89 ELAMQIHQTIEKWTKDNNISSEPLIGGANIKRQIENLKKRPQIIVATTGRLLEVIKLKKI 148
Query: 843 RMDQCRMLVL 872
+M + + +V+
Sbjct: 149 KMHEVKTIVV 158
>UniRef50_A4BBH5 Cluster: Probable ATP-dependent RNA helicase; n=1;
Reinekea sp. MED297|Rep: Probable ATP-dependent RNA
helicase - Reinekea sp. MED297
Length = 448
Score = 107 bits (258), Expect = 3e-22
Identities = 57/150 (38%), Positives = 86/150 (57%), Gaps = 3/150 (2%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F F L +L I + GW +P+ +Q ASIP AL GKD+L A+ G+GKT AY +P L +
Sbjct: 2 FASFDLHPKLTAAIEQHGWTEPTDVQTASIPQALDGKDLLISAETGSGKTAAYLLPALHR 61
Query: 612 V---DPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQN 782
V K I+ L++VPTRELA Q + C L + T ++ ++ GG + + +N
Sbjct: 62 VLSERKPKAGIRVLVMVPTRELAQQVMKDCEALTQQTGLKTVIIRGGQEFQYQASLLRRN 121
Query: 783 VQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+++IATPGRM + ++K + LVL
Sbjct: 122 PEIVIATPGRMTEHLNKNSTDLLDVECLVL 151
>UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein;
n=22; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain ANA-3)
Length = 491
Score = 107 bits (258), Expect = 3e-22
Identities = 55/153 (35%), Positives = 92/153 (60%), Gaps = 6/153 (3%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F + L L+ + E G+ P+PIQ +IP L+GK+VLA A+ GTGKT ++ +P+L +
Sbjct: 3 FSQLGLHSALVKAVTELGYTTPTPIQTKAIPSILAGKNVLAAAQTGTGKTASFVLPLLHR 62
Query: 612 ------VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 773
+ PK+ ++A+I+ PTRELALQ + + AK+ + M GG + R+
Sbjct: 63 FADAPKIRPKR--VRAIILTPTRELALQVEENINQYAKYLPLTAMAMYGGVDAAPQKKRL 120
Query: 774 YQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+ V +++ATPGR++D+ ++ R D+ +LVL
Sbjct: 121 IEGVDLLVATPGRLLDMYTQRAIRFDEVSVLVL 153
>UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular
organisms|Rep: Predicted helicase - Methanosphaera
stadtmanae (strain DSM 3091)
Length = 583
Score = 107 bits (258), Expect = 3e-22
Identities = 53/149 (35%), Positives = 94/149 (63%), Gaps = 1/149 (0%)
Frame = +3
Query: 429 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 608
+F++ + E+ + + G+E+ SPIQ +IP L+ KDV +A+ GTGKT A+ IP+LE
Sbjct: 5 KFKDLNISPEIQKAVADMGFEEASPIQSLAIPQILAHKDVTGQAQTGTGKTAAFGIPLLE 64
Query: 609 QVDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGGTNLRDDIMRIYQNV 785
+D + + +QA+I+ PTRELA+Q ++ +L+ + I V+ GG + I + + V
Sbjct: 65 NIDSEDNNLQAIILCPTRELAIQVAEELRKLSVYLPKIDVLPVYGGQPIDRQIKALQKGV 124
Query: 786 QVIIATPGRMIDLMDKQVARMDQCRMLVL 872
Q+II TPGR++D +D+ ++ + ++L
Sbjct: 125 QIIIGTPGRVMDHIDRGTLSLNNIKTVIL 153
>UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10;
Rhizobiales|Rep: ATP-DEPENDENT RNA HELICASE RHLE -
Brucella melitensis
Length = 535
Score = 107 bits (257), Expect = 4e-22
Identities = 60/165 (36%), Positives = 91/165 (55%), Gaps = 5/165 (3%)
Frame = +3
Query: 393 IKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGT 572
+K ++T F + LL G+ G +P PIQ +IP L G+D+L A+ G+
Sbjct: 76 LKEIELTKENTGGFAALGITGVLLKGVEAAGMTEPKPIQTQAIPSQLEGQDILGIAQTGS 135
Query: 573 GKTGAYCIPVLEQV----DPKKD-TIQALIVVPTRELALQTSQICIELAKHTDIRVMVTT 737
GKT A+ +P+L+++ D ++ T +ALI+ PTRELA+Q Q ++K I +
Sbjct: 136 GKTAAFSLPILQKIIGLGDKRRPKTARALILAPTRELAVQIEQTIRNVSKSAHISTALVL 195
Query: 738 GGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
GG + I RI + V+IATPGR+ DLM + + Q R LVL
Sbjct: 196 GGVSKLSQIKRIAPGIDVLIATPGRLTDLMRDGLVDLSQTRWLVL 240
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 107 bits (257), Expect = 4e-22
Identities = 55/150 (36%), Positives = 89/150 (59%), Gaps = 3/150 (2%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
FE L +L + ++G+ P+PIQE SIPI L GKD+L A+ GTGKT A+ IP+L++
Sbjct: 3 FENLNLIEPILKALRQEGYTSPTPIQEQSIPILLQGKDLLGCAQTGTGKTAAFSIPILQK 62
Query: 612 V---DPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQN 782
+ D +K I+AL++ PTRELA+Q + ++T ++ V GG + +
Sbjct: 63 LYKTDHRKG-IKALVLTPTRELAIQIGESFEAYGRYTGLKHAVIFGGVGQKPQTDALRSG 121
Query: 783 VQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+Q+++ATPGR++DL+ + + VL
Sbjct: 122 IQILVATPGRLLDLISQGFISLSSLDFFVL 151
>UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10;
Proteobacteria|Rep: DEAD/DEAH box helicase -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 481
Score = 107 bits (257), Expect = 4e-22
Identities = 54/143 (37%), Positives = 88/143 (61%), Gaps = 5/143 (3%)
Frame = +3
Query: 459 LLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV---DPKKD 629
LL + + ++ P+P+Q +IP L GKDV+A A+ GTGKT + +P+L+++ P
Sbjct: 12 LLRNLQDLNYQAPTPVQAKAIPAVLGGKDVMAGAQTGTGKTAGFALPLLQRLVQHGPAVS 71
Query: 630 TIQA--LIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIAT 803
+ +A L++VPTRELA Q Q I K D+R + GG ++ +M++ + V V++AT
Sbjct: 72 SNRARVLVLVPTRELAEQVLQSFIAYGKGLDLRFLAAYGGVSINPQMMKLRKGVDVLVAT 131
Query: 804 PGRMIDLMDKQVARMDQCRMLVL 872
PGR++DL + + DQ + LVL
Sbjct: 132 PGRLLDLNRQNAVQFDQVQTLVL 154
>UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family; n=1; Flavobacterium psychrophilum
JIP02/86|Rep: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 644
Score = 107 bits (257), Expect = 4e-22
Identities = 55/151 (36%), Positives = 90/151 (59%), Gaps = 2/151 (1%)
Frame = +3
Query: 426 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGK-DVLARAKNGTGKTGAYCIPV 602
N+FE+ L LL I + G+E P+ +QE +IP+ L D++A A+ GTGKT A+ PV
Sbjct: 2 NKFEQLGLTESLLRAIIDLGFENPTEVQEKAIPMLLEKDIDLVALAQTGTGKTAAFGFPV 61
Query: 603 LEQVDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGGTNLRDDIMRIYQ 779
++++D QALI+ PTREL LQ + +K+ I V+ GG ++ + I +
Sbjct: 62 IQKIDANNRNTQALILSPTRELCLQITNELKNYSKYEKGINVVAVYGGASITEQARDIKR 121
Query: 780 NVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
Q+I+ATPGRM D++++++ + Q +L
Sbjct: 122 GAQIIVATPGRMQDMINRRLVDISQINYCIL 152
>UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|Rep:
Helicase - Limnobacter sp. MED105
Length = 539
Score = 107 bits (257), Expect = 4e-22
Identities = 54/155 (34%), Positives = 91/155 (58%), Gaps = 8/155 (5%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL-- 605
F +F L ++ I +G+ +P+PIQ +IP+ ++G DV+ A+ GTGKT + +P+L
Sbjct: 22 FADFALHPDIQKAIDAQGYTQPTPIQAKAIPVVMTGVDVMGAAQTGTGKTAGFSLPILNR 81
Query: 606 ------EQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIM 767
E P + ++ALI+ PTRELA Q + AK T +R V GG ++ I
Sbjct: 82 LMPLATENTSPARHPVRALILTPTRELADQVAANVHTYAKFTPLRSTVVYGGVDINPQIQ 141
Query: 768 RIYQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+ + V+++IATPGR++D + ++ + Q ++LVL
Sbjct: 142 TLRRGVELVIATPGRLLDHVQQKSINLGQVQVLVL 176
>UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DRS1 -
Ustilago maydis (Smut fungus)
Length = 932
Score = 107 bits (257), Expect = 4e-22
Identities = 60/165 (36%), Positives = 94/165 (56%), Gaps = 8/165 (4%)
Frame = +3
Query: 402 SDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKT 581
S T+ + F F L R +L + + KP+PIQ +IPIAL+GKD++A A G+GKT
Sbjct: 325 SKSTNDAESSFGAFDLSRPVLRALSSLSFHKPTPIQSRTIPIALAGKDIVAGAVTGSGKT 384
Query: 582 GAYCIPVLEQV-------DPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTG 740
A+ IP +E++ P + + LI+ PTRELA+Q + +AK TDIR + G
Sbjct: 385 AAFMIPTIERLTWRAKTRTPHEAKSRVLILAPTRELAIQCYSVGKSIAKFTDIRFCLCVG 444
Query: 741 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVA-RMDQCRMLVL 872
G +++ + +V+IATPGR+ID + + +D +LV+
Sbjct: 445 GLSVKSQEAELKLRPEVVIATPGRLIDHVRNSASFTLDDIEILVM 489
>UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL
protein - Bacillus subtilis
Length = 376
Score = 107 bits (256), Expect = 5e-22
Identities = 45/130 (34%), Positives = 85/130 (65%)
Frame = +3
Query: 483 GWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTR 662
G++KP+P+QE + + + GKDV+A + GTGKT AY +PVLE++ P++ QA+I+ P+R
Sbjct: 23 GFQKPTPVQEQAAQLIMDGKDVIAESPTGTGKTLAYALPVLERIKPEQKHPQAVILAPSR 82
Query: 663 ELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVA 842
EL +Q Q+ + +++R GG N++ + ++ ++ +I+ TPGR+ +L+ +
Sbjct: 83 ELVMQIFQVIQDWKAGSELRAASLIGGANVKKQVEKLKKHPHIIVGTPGRVFELIKAKKL 142
Query: 843 RMDQCRMLVL 872
+M + + +VL
Sbjct: 143 KMHEVKTIVL 152
>UniRef50_A5FH33 Cluster: DEAD/DEAH box helicase domain protein;
n=7; Flavobacteria|Rep: DEAD/DEAH box helicase domain
protein - Flavobacterium johnsoniae UW101
Length = 450
Score = 107 bits (256), Expect = 5e-22
Identities = 52/148 (35%), Positives = 88/148 (59%), Gaps = 1/148 (0%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
FE+F L + L + E G+ P+PIQE S + +SG+D++ A+ GTGKT AY +P+L+
Sbjct: 4 FEKFNLPKSLQKAVDELGFVTPTPIQEKSFSVIMSGRDMMGIAQTGTGKTFAYLLPLLKL 63
Query: 612 VD-PKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQ 788
+T + +++VPTREL +Q + +L K+ ++ + GG N+ +Y+ V
Sbjct: 64 YKFTHTNTPKIVVLVPTRELVVQVVEEVEKLTKYMSVKTLGIYGGVNINTQKKAVYEGVD 123
Query: 789 VIIATPGRMIDLMDKQVARMDQCRMLVL 872
+++ TPGR +DL V R D+ + LV+
Sbjct: 124 ILVGTPGRTMDLALDAVVRFDETQKLVI 151
>UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20;
Francisella|Rep: ATP-dependent RNA helicase -
Francisella tularensis subsp. novicida GA99-3548
Length = 569
Score = 106 bits (255), Expect = 6e-22
Identities = 54/151 (35%), Positives = 93/151 (61%), Gaps = 3/151 (1%)
Frame = +3
Query: 429 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 608
+F + L ++++ + + G+E P+PIQ+ +IP LSG+DVL +A+ GTGKT A+ +P++
Sbjct: 8 DFSQLGLNQDIVDTVIKLGYENPTPIQQYAIPYILSGRDVLGQAQTGTGKTAAFALPLIN 67
Query: 609 QVD-PKKDTI-QALIVVPTRELALQTSQICIELAKHT-DIRVMVTTGGTNLRDDIMRIYQ 779
+D +D Q L++ PTRELA+Q ++ AK+ ++ V GG I + Q
Sbjct: 68 NMDLASRDRAPQVLVLAPTRELAIQVAEQFEAFAKNVPNLDVACIYGGQEYGSQIRALKQ 127
Query: 780 NVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
V+V++ T GR++D ++K ++D R LVL
Sbjct: 128 GVKVVVGTTGRVMDHIEKGTLQLDNLRALVL 158
>UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Reinekea sp. MED297|Rep: DEAD/DEAH box helicase-like
protein - Reinekea sp. MED297
Length = 579
Score = 106 bits (255), Expect = 6e-22
Identities = 56/148 (37%), Positives = 87/148 (58%), Gaps = 1/148 (0%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F + L LL + G+E P+PIQ +I L G DVL A+ GTGKT A+ +P+L +
Sbjct: 7 FADLGLAPVLLKTLDSLGYETPTPIQSQAIVQLLDGNDVLGLAQTGTGKTAAFSLPLLSR 66
Query: 612 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTD-IRVMVTTGGTNLRDDIMRIYQNVQ 788
+D K+ QAL++ PTRELA+Q ++ A+ D V+ GG ++R+ + + QN Q
Sbjct: 67 IDTTKNKPQALVLCPTRELAIQVAEAFQTYARGVDNFHVLPIYGGADMRNQLRALKQNPQ 126
Query: 789 VIIATPGRMIDLMDKQVARMDQCRMLVL 872
VI+ TPGR++D + + + + LVL
Sbjct: 127 VIVGTPGRVMDHLRRGTLDLSDLKHLVL 154
>UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n=7;
Trypanosomatidae|Rep: ATP-dependent RNA helicase,
putative - Leishmania major
Length = 803
Score = 106 bits (255), Expect = 6e-22
Identities = 56/153 (36%), Positives = 88/153 (57%), Gaps = 2/153 (1%)
Frame = +3
Query: 420 RGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIP 599
+G F+ F L++ LL I ++G+ P+PIQ +IP L G DV+A A+ G+GKT A+ IP
Sbjct: 20 KGGGFQSFNLEKPLLDAILKQGFSVPTPIQRKAIPPMLQGNDVVAMARTGSGKTAAFLIP 79
Query: 600 VLE--QVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 773
+L + K I+ L++ PTREL+LQ + L K D+R GG ++ +
Sbjct: 80 MLNTLKAHAKIVGIRGLVLSPTRELSLQILRNGFALNKFLDLRFAALVGGDSMDQQFELL 139
Query: 774 YQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
N V++ATPGR++ +M++ + R LVL
Sbjct: 140 ASNPDVVVATPGRLLHIMEEASLHLTSVRCLVL 172
>UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 568
Score = 106 bits (255), Expect = 6e-22
Identities = 70/208 (33%), Positives = 106/208 (50%), Gaps = 18/208 (8%)
Frame = +3
Query: 303 SISQTKGEVDKSIDDVGWKSKLKIPPKDR--RIKTSD--VTDTRGN------EFEEFCLK 452
S S +DK DD W K KDR RI D ++ GN + E +
Sbjct: 216 SYSSRYDSLDKRFDDKHWSEKSLSQMKDRDWRIFREDFGISARGGNIPKPLRSWRESGIP 275
Query: 453 RELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVD--PKK 626
+L I E G+++PSPIQ +IPI L +D++ A+ G+GKT ++ IP+L + PK
Sbjct: 276 ASILSTIEEVGYKEPSPIQRQAIPIGLQNRDLIGIAETGSGKTASFLIPLLAYISKLPKL 335
Query: 627 DTI------QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQ 788
D QALI+VPTRELA Q + A +R + GG ++ D + +
Sbjct: 336 DEHTKALGPQALILVPTRELAQQIETETNKFAGRLGLRCVSIVGGRDMNDQAYALRDGAE 395
Query: 789 VIIATPGRMIDLMDKQVARMDQCRMLVL 872
++IATPGR+ D +++ V + QC +V+
Sbjct: 396 IVIATPGRLKDCIERHVLVLSQCTYVVM 423
>UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2;
Sordariomycetes|Rep: ATP-dependent RNA helicase DBP10 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 914
Score = 106 bits (255), Expect = 6e-22
Identities = 55/140 (39%), Positives = 83/140 (59%), Gaps = 2/140 (1%)
Frame = +3
Query: 411 TDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAY 590
T + F+ L LL I KG+ P+PIQ SIP+ L +DV+ A+ G+GKT A+
Sbjct: 85 TGKKSGGFQAMGLNPSLLQAITRKGFAVPTPIQRKSIPLILDRRDVVGMARTGSGKTAAF 144
Query: 591 CIPVLEQVDPKKDTI--QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDI 764
IP++E++ + +ALI+ P+RELALQT ++ E K TD++ ++ GG +L D
Sbjct: 145 VIPMIERLRAHSARVGARALIMSPSRELALQTLKVVKEFGKGTDLKTVLLVGGDSLEDQF 204
Query: 765 MRIYQNVQVIIATPGRMIDL 824
+ N +IIATPGR + L
Sbjct: 205 GFMTTNPDIIIATPGRFLHL 224
>UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Chaetomium globosum|Rep: ATP-dependent RNA helicase
DBP10 - Chaetomium globosum (Soil fungus)
Length = 762
Score = 106 bits (255), Expect = 6e-22
Identities = 54/148 (36%), Positives = 87/148 (58%), Gaps = 2/148 (1%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F+ L LL I KG+ P+PIQ +IP+ L +DV+ A+ G+GKT A+ IP++E+
Sbjct: 88 FQAMGLNSNLLRAISRKGFSVPTPIQRKTIPLVLERRDVVGMARTGSGKTAAFVIPMIER 147
Query: 612 VDPKKDTI--QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNV 785
+ + +A+I+ P+RELALQT ++ EL K TD++ ++ GG +L + + N
Sbjct: 148 LKAHSARVGARAIIMSPSRELALQTLKVVKELGKGTDLKTVLLVGGDSLEEQFGLMAANP 207
Query: 786 QVIIATPGRMIDLMDKQVARMDQCRMLV 869
+IIATPGR + L + + R +V
Sbjct: 208 DIIIATPGRFLHLKVEMSLNLSSVRYVV 235
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 106 bits (254), Expect = 9e-22
Identities = 56/148 (37%), Positives = 86/148 (58%), Gaps = 1/148 (0%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F L LL I E+G+E+PSPIQE SIP L GKDVL A+ GTGKT A+ +P+L +
Sbjct: 8 FASLGLPFNLLRAIEEQGYEQPSPIQEQSIPHLLEGKDVLGLAQTGTGKTAAFTLPLLAR 67
Query: 612 VDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGGTNLRDDIMRIYQNVQ 788
+ Q L++ PTRELA Q + +KH ++++V GG++ + Q Q
Sbjct: 68 TQNEVREPQVLVLAPTRELAQQVAMAVESYSKHESNVKVASIYGGSDFGSQFRALKQGPQ 127
Query: 789 VIIATPGRMIDLMDKQVARMDQCRMLVL 872
++ TPGR++D + + +++ R +VL
Sbjct: 128 WVVGTPGRVMDHIRRGTLKLEGIRAVVL 155
>UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1;
Acidobacteria bacterium Ellin345|Rep: DEAD/DEAH box
helicase-like - Acidobacteria bacterium (strain
Ellin345)
Length = 423
Score = 106 bits (254), Expect = 9e-22
Identities = 55/127 (43%), Positives = 80/127 (62%), Gaps = 1/127 (0%)
Frame = +3
Query: 495 PSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV-DPKKDTIQALIVVPTRELA 671
P+P+QE +IP AL G+D+LA A+ GTGKT A+ IP LE + D + +Q LI+VPTRELA
Sbjct: 50 PTPVQEKAIPPALDGRDILATAQTGTGKTLAFIIPALEMLRDTEPCGVQVLILVPTRELA 109
Query: 672 LQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVARMD 851
+Q + +L + GGT+ R+ I I +V++ATPGR+ D M +++ +
Sbjct: 110 MQVHGVYEQLKGKKLKSAALVMGGTSERNQIQSIRSGARVVVATPGRLEDYMGRRLVDLS 169
Query: 852 QCRMLVL 872
Q MLVL
Sbjct: 170 QVEMLVL 176
>UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=4;
Sphingobacteriales|Rep: Possible ATP-dependent RNA
helicase - Cytophaga hutchinsonii (strain ATCC 33406 /
NCIMB 9469)
Length = 463
Score = 106 bits (254), Expect = 9e-22
Identities = 55/148 (37%), Positives = 89/148 (60%), Gaps = 1/148 (0%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
FEE L R+LL I E G+ +P+ IQ +IP L+G D++ A+ GTGKT AY +P+L +
Sbjct: 7 FEELKLNRQLLNAIEEAGYTEPTEIQSKAIPQILAGHDIIGVAQTGTGKTAAYALPILMK 66
Query: 612 VD-PKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQ 788
+ + +A+I PTREL +Q +LAK+TD+R++ GG + + + V
Sbjct: 67 IKYAQGHNPRAVIFGPTRELVMQIEIAMKQLAKYTDLRIVALYGGIGPKLQKEHLQKGVD 126
Query: 789 VIIATPGRMIDLMDKQVARMDQCRMLVL 872
+I+ATPGR +DL ++ + + + +VL
Sbjct: 127 IIVATPGRFLDLYLEEEIVLKEVKTMVL 154
>UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: ATP-dependent RNA helicase
- Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469)
Length = 580
Score = 106 bits (254), Expect = 9e-22
Identities = 55/151 (36%), Positives = 88/151 (58%), Gaps = 4/151 (2%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F++ L E++ I G+ + +PIQE +IPI ++GKD+ +A+ GTGKT A+ IP +E
Sbjct: 3 FKDLGLSPEVVEAIESIGYSEATPIQEKTIPILMTGKDLTGQAQTGTGKTAAFGIPAIEH 62
Query: 612 VDPKKDTIQALIVVPTRELALQTSQICIELAK----HTDIRVMVTTGGTNLRDDIMRIYQ 779
VD + Q+LI+ PTRELAL Q+C EL K +RV+ GG ++ I +
Sbjct: 63 VDISINQTQSLILCPTRELAL---QVCTELKKLSKFKKGLRVLAVYGGESIERQIRDLKA 119
Query: 780 NVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+++ TPGR+ID +D++ ++L
Sbjct: 120 GAHIVVGTPGRIIDHLDRRTLNASHLSQIIL 150
>UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4;
Bacteria|Rep: ATP-dependent RNA helicase protein -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 413
Score = 106 bits (254), Expect = 9e-22
Identities = 57/152 (37%), Positives = 92/152 (60%), Gaps = 4/152 (2%)
Frame = +3
Query: 429 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 608
+FE + L + + E G+ +P+ IQ SIP L+G+DVLA A+ GTGKT A+ IPVL
Sbjct: 2 KFESYDLAPGIKKSLAEAGFNRPTDIQFKSIPPILAGEDVLAIAQTGTGKTAAFVIPVLN 61
Query: 609 Q-VDPKKDT---IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIY 776
++ KK I L++ PTRELA+Q S++ ++ +T +R + TGG I
Sbjct: 62 TLINVKKSEHTDISCLVMAPTRELAVQISEVFKKIGAYTRLRTVCITGGVEQEAQIAAAD 121
Query: 777 QNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+ +++ATPGRM DL+ ++ ++ + ++LVL
Sbjct: 122 YGIDILVATPGRMFDLIYQKHIKITRVKILVL 153
>UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p -
Drosophila melanogaster (Fruit fly)
Length = 827
Score = 106 bits (254), Expect = 9e-22
Identities = 53/148 (35%), Positives = 91/148 (61%), Gaps = 2/148 (1%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F+ L EL+ GI ++G++ P+PIQ +IP+ L G+DV+A AK G+GKT + IP+ E+
Sbjct: 41 FQSMGLGFELIKGITKRGYKVPTPIQRKTIPLILEGRDVVAMAKTGSGKTACFLIPLFEK 100
Query: 612 VDPKKDT--IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNV 785
+ ++ T +ALI+ PTRELA+QT + EL + +++ ++ GG ++ I+
Sbjct: 101 LQRREPTKGARALILSPTRELAVQTYKFIKELGRFMELKSILVLGGDSMDSQFSAIHTCP 160
Query: 786 QVIIATPGRMIDLMDKQVARMDQCRMLV 869
VI+ATPGR + L + +++ +V
Sbjct: 161 DVIVATPGRFLHLCVEMDLKLNSIEYVV 188
>UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP10
- Yarrowia lipolytica (Candida lipolytica)
Length = 926
Score = 106 bits (254), Expect = 9e-22
Identities = 52/128 (40%), Positives = 83/128 (64%), Gaps = 2/128 (1%)
Frame = +3
Query: 447 LKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE--QVDP 620
L + +L I KG+++P+PIQ +IP+ L GKDV+ A+ G+GKT A+ +P+LE +V
Sbjct: 109 LSQLVLKNIARKGFKQPTPIQRKTIPLVLEGKDVVGMARTGSGKTAAFVLPMLEKLKVHS 168
Query: 621 KKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIA 800
K +A+I+ P+RELALQT ++ + + TD+R+ + GG +L + + N +IIA
Sbjct: 169 AKVGARAVILSPSRELALQTLKVVKDFSAGTDLRLAMLVGGDSLEEQFKMMMSNPDIIIA 228
Query: 801 TPGRMIDL 824
TPGR + L
Sbjct: 229 TPGRFLHL 236
>UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Phaeosphaeria nodorum|Rep: ATP-dependent RNA helicase
DBP10 - Phaeosphaeria nodorum (Septoria nodorum)
Length = 878
Score = 106 bits (254), Expect = 9e-22
Identities = 55/167 (32%), Positives = 92/167 (55%), Gaps = 2/167 (1%)
Frame = +3
Query: 330 DKSIDDVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQ 509
D DD + + + + + +G F+ L LL I +KG++ P+PIQ
Sbjct: 46 DDGSDDEAFIAAKQAAANRKNANAPGKSGKKGGGFQAMGLNVALLKAIAQKGFKIPTPIQ 105
Query: 510 EASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQA--LIVVPTRELALQTS 683
++P+ L G DV+ A+ G+GKT A+ IP++E++ + A +I+ P+RELALQT
Sbjct: 106 RKAVPLILQGDDVVGMARTGSGKTAAFVIPMIERLKTHSAKVGARGVIMSPSRELALQTL 165
Query: 684 QICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMIDL 824
++ E + TD+R ++ GG +L + + N +IIATPGR + L
Sbjct: 166 KVVKEFGRGTDLRTILLVGGDSLEEQFNSMTTNPDIIIATPGRFLHL 212
>UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4;
Legionella pneumophila|Rep: ATP-dependent RNA helicase -
Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 589
Score = 105 bits (253), Expect = 1e-21
Identities = 51/150 (34%), Positives = 87/150 (58%), Gaps = 1/150 (0%)
Frame = +3
Query: 426 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 605
+ F F L + + + PSPIQ +IP+ L G+D +A A+ GTGKT A+ +P+L
Sbjct: 6 SNFSTFNFSNALNKALEDMKFITPSPIQAQTIPLILQGRDAIALAQTGTGKTAAFALPIL 65
Query: 606 EQVDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGGTNLRDDIMRIYQN 782
+ + P+ T QALI+ PTRELA+Q ++ L+K+ ++ + V GG + ++
Sbjct: 66 QNLSPEISTTQALILAPTRELAIQVAEQFELLSKYQRNVTIAVLCGGQEYGRQLKQLRSG 125
Query: 783 VQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
QV++ TPGR++D +DK ++ + +L
Sbjct: 126 AQVVVGTPGRILDHIDKGTLLLNNLKTFIL 155
>UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Chromohalobacter salexigens DSM 3043|Rep: DEAD/DEAH box
helicase-like protein - Chromohalobacter salexigens
(strain DSM 3043 / ATCC BAA-138 / NCIMB13768)
Length = 568
Score = 105 bits (253), Expect = 1e-21
Identities = 54/148 (36%), Positives = 86/148 (58%), Gaps = 1/148 (0%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F E L +L + G+E PS IQ +IP L G+DVL +A+ GTGKT A+ +P+L +
Sbjct: 11 FAELSLPSTILSTLETLGYETPSLIQAKTIPALLEGRDVLGQAQTGTGKTAAFALPLLSR 70
Query: 612 VDPKKDTIQALIVVPTRELALQTSQICIELAKHT-DIRVMVTTGGTNLRDDIMRIYQNVQ 788
+D ++ Q L++ PTRELA Q + ++ + + V+ GG R+ + + + Q
Sbjct: 71 LDLQRREPQVLVLAPTRELAQQVAASFVQYGRGVKGLEVLSLCGGQEYREQLSGLRRGAQ 130
Query: 789 VIIATPGRMIDLMDKQVARMDQCRMLVL 872
VI+ TPGR+ID +D+ ++D LVL
Sbjct: 131 VIVGTPGRVIDHLDRGSLKLDGLNALVL 158
>UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=16;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Shewanella denitrificans (strain OS217 / ATCC
BAA-1090 / DSM 15013)
Length = 433
Score = 105 bits (253), Expect = 1e-21
Identities = 51/136 (37%), Positives = 82/136 (60%), Gaps = 5/136 (3%)
Frame = +3
Query: 429 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 608
+FE F E+L I E G++ +P+Q+ +IP G+DVLA A+ GTGKT A+ +P+L+
Sbjct: 2 KFESFSFAPEILRAIAECGYQNMTPVQQQAIPAIRRGEDVLASAQTGTGKTAAFALPILQ 61
Query: 609 QVDPKKDTIQ-----ALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 773
++ + T+Q ALI+ PTRELA Q + +KH +I V+ GG + ++
Sbjct: 62 KMHERPMTVQHSNARALILTPTRELAAQVADNISAYSKHMNISVLTIYGGMKMATQAQKL 121
Query: 774 YQNVQVIIATPGRMID 821
Q +I+ATPGR+++
Sbjct: 122 KQGADIIVATPGRLLE 137
>UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1;
Methanospirillum hungatei JF-1|Rep: DEAD/DEAH box
helicase-like - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 531
Score = 105 bits (253), Expect = 1e-21
Identities = 53/148 (35%), Positives = 86/148 (58%), Gaps = 1/148 (0%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F + L ++ I + G+E+P+PIQ+ IP+ L+G DV +A GTGKT A+ IP +E
Sbjct: 6 FSDLQLSPGIIKAIRDIGYEEPTPIQQEVIPLILAGNDVAGQAYTGTGKTAAFGIPAIEL 65
Query: 612 VDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGGTNLRDDIMRIYQNVQ 788
P +Q +++ P+RELA+Q +LA H I ++ GG + I + + VQ
Sbjct: 66 CQPANRNVQTIVLCPSRELAVQVGTELNKLAMHKKGISILPVYGGQPIERQIKALSRGVQ 125
Query: 789 VIIATPGRMIDLMDKQVARMDQCRMLVL 872
+II TPGR+ID + ++ +D ++VL
Sbjct: 126 IIIGTPGRVIDHIKRKTLLLDAVSLVVL 153
>UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=7;
Prochlorococcus marinus|Rep: DEAD/DEAH box helicase-like
protein - Prochlorococcus marinus (strain MIT 9312)
Length = 593
Score = 105 bits (252), Expect = 1e-21
Identities = 51/151 (33%), Positives = 95/151 (62%), Gaps = 2/151 (1%)
Frame = +3
Query: 426 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 605
N F +F + +L + KG++ P+PIQ+A+IP + G+D+L +A+ GTGKT A+ +P++
Sbjct: 51 NGFLDFGFNQSILNSLSNKGYKNPTPIQKAAIPELMLGRDLLGQAQTGTGKTAAFALPLI 110
Query: 606 EQV-DPKKDTIQALIVVPTRELALQTSQICIEL-AKHTDIRVMVTTGGTNLRDDIMRIYQ 779
E++ D K+ + L++ PTRELA Q ++ ++ T+ + + GGT+ R+ I + +
Sbjct: 111 EKLADNKELNAKVLVMTPTRELATQVAESFKSYSSESTNFKTIAIYGGTDYRNQIYALKR 170
Query: 780 NVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
V V++ TPGR++D + + +++ LVL
Sbjct: 171 KVDVVVGTPGRIMDHIRQGTFKVNSINCLVL 201
>UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila
pseudoobscura|Rep: GA19670-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 1007
Score = 105 bits (252), Expect = 1e-21
Identities = 59/160 (36%), Positives = 92/160 (57%), Gaps = 1/160 (0%)
Frame = +3
Query: 396 KTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTG 575
+TSDV + F L+R+++ G+ + + P+ IQ A+IPIAL+G D+L ++K+GTG
Sbjct: 15 RTSDVEAGQMKHFSALHLRRQVMRGLAAENFRTPTKIQAAAIPIALTGMDLLVQSKSGTG 74
Query: 576 KTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELA-KHTDIRVMVTTGGTNL 752
KT Y + L+ + L+++PTRELALQ I L K +V GGT++
Sbjct: 75 KTLIYVVTALQMCSLSTQHPEVLVILPTRELALQVHDIFRFLGEKLRSFKVSSFMGGTDV 134
Query: 753 RDDIMRIYQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
D ++ +N V I TPGR++ L +K V M ++LVL
Sbjct: 135 TRDREKL-RNCHVAIGTPGRLLQLHEKGVLNMSMVKLLVL 173
>UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 643
Score = 105 bits (252), Expect = 1e-21
Identities = 63/203 (31%), Positives = 111/203 (54%), Gaps = 3/203 (1%)
Frame = +3
Query: 270 NRISSSNHVGNSISQTKGEVDKSIDDVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCL 449
N+ S+ + + + E + DD+G + ++++K + + +++ L
Sbjct: 141 NKASNDKVLKMAKEKLDNESEHEDDDMGTQINQNA---NKKLKEQKLNKKKKKTWQDLGL 197
Query: 450 KRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV--DPK 623
+ LL + E +E P+ IQ +IP AL GKD+LA + G+GKT A+ IP+L++ P
Sbjct: 198 IKPLLKAVEEMQYEFPTNIQSLAIPAALQGKDLLASSLTGSGKTAAFLIPILQKFYRSPF 257
Query: 624 KDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIAT 803
+ +ALIV PTRELA Q ++ +L K+T +R + G + ++ + N +VIIAT
Sbjct: 258 TNYSKALIVTPTRELAFQIYEVFTKLNKYTKLRACLVIGQSAMQKQEAELRGNPEVIIAT 317
Query: 804 PGRMID-LMDKQVARMDQCRMLV 869
PGR+ID L + + +D +L+
Sbjct: 318 PGRLIDHLQNSRSIDLDNLEVLI 340
>UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;
Pezizomycotina|Rep: ATP-dependent RNA helicase dbp10 -
Emericella nidulans (Aspergillus nidulans)
Length = 936
Score = 105 bits (252), Expect = 1e-21
Identities = 56/167 (33%), Positives = 92/167 (55%), Gaps = 2/167 (1%)
Frame = +3
Query: 330 DKSIDDVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQ 509
D DD + ++ + + T +G F+ L LL I KG+ P+PIQ
Sbjct: 59 DSDEDDEAFIAEKQTSANRKSANLKGRTVKKGGGFQAMGLNANLLKAIARKGFSVPTPIQ 118
Query: 510 EASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV--DPKKDTIQALIVVPTRELALQTS 683
+IP+ + +DV+ A+ G+GKT A+ IP++E++ K + LI+ P+RELALQT
Sbjct: 119 RKTIPVIMEDQDVVGMARTGSGKTAAFVIPMIEKLKSHSTKFGARGLILSPSRELALQTL 178
Query: 684 QICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMIDL 824
++ EL K TD++ ++ GG +L + + N ++IATPGR + L
Sbjct: 179 KVVKELGKGTDLKSVLLVGGDSLEEQFGMMAGNPDIVIATPGRFLHL 225
>UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Marinobacter aquaeolei VT8|Rep: DEAD/DEAH box
helicase domain protein - Marinobacter aquaeolei (strain
ATCC 700491 / DSM 11845 / VT8)(Marinobacter
hydrocarbonoclasticus (strain DSM 11845))
Length = 528
Score = 105 bits (251), Expect = 2e-21
Identities = 56/148 (37%), Positives = 83/148 (56%), Gaps = 1/148 (0%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F E L +L + G+E PSPIQ SIP L+G +L A+ GTGKT A+ +P+L +
Sbjct: 26 FAELGLDPAVLEAVSAVGYETPSPIQAQSIPALLAGNHLLGVAQTGTGKTAAFALPLLSR 85
Query: 612 VDPKKDTIQALIVVPTRELALQTSQICIELA-KHTDIRVMVTTGGTNLRDDIMRIYQNVQ 788
+D Q L++ PTRELA+Q ++ A K + V+ GG + I + + Q
Sbjct: 86 IDANVAEPQILVLAPTRELAIQVAEAFTTYASKFRNFHVLPIYGGQDFSPQIRGLKRGAQ 145
Query: 789 VIIATPGRMIDLMDKQVARMDQCRMLVL 872
VI+ TPGRM+D + K ++D + LVL
Sbjct: 146 VIVGTPGRMLDHLRKGTLKLDGLKALVL 173
>UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subunit
family protein; n=1; Tetrahymena thermophila SB210|Rep:
Type III restriction enzyme, res subunit family protein
- Tetrahymena thermophila SB210
Length = 1130
Score = 105 bits (251), Expect = 2e-21
Identities = 54/152 (35%), Positives = 86/152 (56%), Gaps = 2/152 (1%)
Frame = +3
Query: 420 RGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIP 599
+G FE L + I +G+ P+PIQ +IP+ L G+DV+A ++ G+GKT A+ IP
Sbjct: 297 KGGGFESMNLVYPVYKAIKTRGFNMPTPIQRKAIPLILEGRDVVACSRTGSGKTAAFIIP 356
Query: 600 VLEQVDPKKDTI--QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 773
++ ++ + +ALIVVPTRELALQ + + K TD+ + GG L +
Sbjct: 357 LINKLQNHSRIVGARALIVVPTRELALQIASVLKTFIKFTDLTYTLIVGGHGLEGQFESL 416
Query: 774 YQNVQVIIATPGRMIDLMDKQVARMDQCRMLV 869
N +IIATPGR+ L+D+ +++ L+
Sbjct: 417 ASNPDIIIATPGRLSQLIDETDLSLNKVEFLI 448
>UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;
n=3; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 29 - Oryza sativa subsp. japonica (Rice)
Length = 851
Score = 105 bits (251), Expect = 2e-21
Identities = 49/132 (37%), Positives = 84/132 (63%), Gaps = 3/132 (2%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
FE L E+ G+ KG+ P+PIQ ++P+ L+G D+ A A+ G+GKT A+ +P++++
Sbjct: 51 FESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAGHDIAAMARTGSGKTAAFLVPMIQR 110
Query: 612 VDPKKDT---IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQN 782
+ + D I+ALI+ PTR+LA QT + +L K TD+++ + GG ++ + +N
Sbjct: 111 L-RRHDAGAGIRALILSPTRDLATQTLKFAQQLGKFTDLKISLIVGGDSMESQFEELAEN 169
Query: 783 VQVIIATPGRMI 818
+IIATPGR++
Sbjct: 170 PDIIIATPGRLV 181
>UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX27;
n=34; Bilateria|Rep: Probable ATP-dependent RNA helicase
DDX27 - Homo sapiens (Human)
Length = 796
Score = 105 bits (251), Expect = 2e-21
Identities = 52/133 (39%), Positives = 84/133 (63%), Gaps = 3/133 (2%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F++ L R LL I G+++P+PIQ+A IP+ L GKD+ A A GTGKT A+ +PVLE+
Sbjct: 220 FQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLER 279
Query: 612 V--DPKKDTI-QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQN 782
+ P++ + + L++VPTREL +Q + +LA+ +I + GG +++ +
Sbjct: 280 LIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLAQFCNITTCLAVGGLDVKSQEAALRAA 339
Query: 783 VQVIIATPGRMID 821
++IATPGR+ID
Sbjct: 340 PDILIATPGRLID 352
>UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase - Nasonia vitripennis
Length = 836
Score = 104 bits (250), Expect = 3e-21
Identities = 66/211 (31%), Positives = 110/211 (52%), Gaps = 11/211 (5%)
Frame = +3
Query: 273 RISSSNHVGNSISQTKGEVDKSIDDVGWKSKLKIPPKDRRIKTSDVTD----TRGNEFEE 440
+I G+ + E D D + K K K+ + + + D+ D T +
Sbjct: 97 QIKEEEDAGDDVGLFVSEEDLKKDAIKTKEK-KVKKEKAKAEDQDLIDFEECTNYDTLAT 155
Query: 441 FC---LKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F L R LL + + P+PIQ A+IP+AL G+D+ A GTGKT AY +P LE+
Sbjct: 156 FYNMNLSRPLLKAVTSMNFVNPTPIQAATIPVALMGRDICGCAATGTGKTAAYMLPTLER 215
Query: 612 V--DPKKDTI-QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQN 782
+ P + + L++VPTREL +Q Q+ +L++ T + V ++ GG +++ + +N
Sbjct: 216 LLYRPLDGAVTRVLVLVPTRELGVQVYQVTKQLSQFTSVEVGLSVGGLDVKVQESVLRKN 275
Query: 783 VQVIIATPGRMID-LMDKQVARMDQCRMLVL 872
++IATPGR+ID L + +D +L+L
Sbjct: 276 PDIVIATPGRLIDHLANTPTFSLDTIEVLIL 306
>UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|Rep:
MGC114699 protein - Xenopus laevis (African clawed frog)
Length = 758
Score = 104 bits (250), Expect = 3e-21
Identities = 52/133 (39%), Positives = 83/133 (62%), Gaps = 3/133 (2%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F++ L R LL I + +P+PIQ+A IP+ L GKD+ A A GTGKT A+ +PVLE+
Sbjct: 183 FQDMNLSRPLLKAISAMSFTQPTPIQKACIPVGLLGKDICACAATGTGKTAAFMLPVLER 242
Query: 612 V--DPKKDTI-QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQN 782
+ P++ + + L++VPTREL +Q + +LA+ T++ + GG +++ +
Sbjct: 243 LIYKPREAPVTRVLVLVPTRELGIQVHAVTRQLAQFTEVTTCLAVGGLDVKTQEAALRSG 302
Query: 783 VQVIIATPGRMID 821
V+IATPGR+ID
Sbjct: 303 PDVLIATPGRLID 315
>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 432
Score = 104 bits (250), Expect = 3e-21
Identities = 53/160 (33%), Positives = 91/160 (56%), Gaps = 5/160 (3%)
Frame = +3
Query: 408 VTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGA 587
++ T F + L LL + E G+ KP+PIQ SIP+ L G+D+L A+ GTGKT +
Sbjct: 1 MSPTSAQAFADLALAPTLLRALDEAGYVKPTPIQAQSIPLLLEGRDLLGLAQTGTGKTAS 60
Query: 588 YCIPVLEQV--DPK---KDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNL 752
+ +P+L ++ P+ K+ + L++ PTREL Q + ++H +RV GG +
Sbjct: 61 FALPLLHRLAATPRPAPKNGARVLVLAPTRELVSQIADGFESFSRHQPVRVTTIFGGVSQ 120
Query: 753 RDDIMRIYQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+ + + V +I+A PGR++DL+++ + + Q LVL
Sbjct: 121 VHQVKALEEGVDIIVAAPGRLLDLIEQGLCDLSQLETLVL 160
>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 536
Score = 104 bits (250), Expect = 3e-21
Identities = 49/147 (33%), Positives = 84/147 (57%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F + L L + E G+ +P+PIQ ++P L+G+DV A+ GTGKT A+ +P+L +
Sbjct: 135 FSKLGLNDALAFAVTEMGYTEPTPIQAQAVPAVLAGRDVTGSAQTGTGKTAAFALPILHK 194
Query: 612 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQV 791
+ + ++ L++ PTRELALQ + + +K+TD+ V GG + + V V
Sbjct: 195 LGAHERRLRCLVLEPTRELALQVEEAFQKYSKYTDLTATVVYGGVGYGKQREDLQRGVDV 254
Query: 792 IIATPGRMIDLMDKQVARMDQCRMLVL 872
+ ATPGR++D +++ + +LVL
Sbjct: 255 VAATPGRLLDHIEQGTMTLADVEILVL 281
>UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box
family; n=6; Bacteria|Rep: ATP-dependent RNA helicase,
DEAD-box family - Sulfurovum sp. (strain NBC37-1)
Length = 492
Score = 104 bits (250), Expect = 3e-21
Identities = 51/134 (38%), Positives = 85/134 (63%), Gaps = 1/134 (0%)
Frame = +3
Query: 429 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 608
+F +F LK + + E G+++PSP+Q+ +IP+ L G D++A+A+ GTGKT A+ +P++
Sbjct: 2 KFTDFNLKDTIQAAVAEAGFKEPSPVQKDAIPLVLEGHDMIAQAQTGTGKTAAFGLPIMS 61
Query: 609 QVDPKKD-TIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNV 785
+ K D +++ L++VPTRELA+Q S K + ++ GGT I RI Q
Sbjct: 62 MM--KADGSVEGLVIVPTRELAMQVSDELFRFGKLSGLKTATVYGGTAYGKQIERIKQ-A 118
Query: 786 QVIIATPGRMIDLM 827
+++ATPGR+ DL+
Sbjct: 119 SIVVATPGRLQDLL 132
>UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=1; Exiguobacterium sibiricum
255-15|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Exiguobacterium sibiricum 255-15
Length = 391
Score = 103 bits (248), Expect = 5e-21
Identities = 50/129 (38%), Positives = 78/129 (60%)
Frame = +3
Query: 486 WEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRE 665
+EK P+QE +IP+ KDVL A GTGKT AY IP LE +D + IQ +I PTRE
Sbjct: 17 FEKMMPVQEQAIPLLRERKDVLVEAPTGTGKTLAYVIPALELIDENEPHIQVVITAPTRE 76
Query: 666 LALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAR 845
L +Q Q+ ++ + I+ GG L+ R+ + Q+I+ TPGR+++L+D + +
Sbjct: 77 LVMQIHQVIQLFSQGSGIKSGAFIGGVELKRQHERLKKKPQIIVGTPGRLVELIDSKKMK 136
Query: 846 MDQCRMLVL 872
M + +++VL
Sbjct: 137 MHKVKLIVL 145
>UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Rhodobacteraceae|Rep: DEAD/DEAH box helicase domain
protein - Dinoroseobacter shibae DFL 12
Length = 508
Score = 103 bits (248), Expect = 5e-21
Identities = 59/156 (37%), Positives = 90/156 (57%), Gaps = 8/156 (5%)
Frame = +3
Query: 429 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 608
+F+ L L+ G+ + P+PIQ +IP L+G+DVL A+ GTGKT A+ +P+L+
Sbjct: 72 DFDMLGLSPRLVAGLAAQNITDPTPIQTRAIPHGLNGRDVLGIAQTGTGKTAAFGLPLLD 131
Query: 609 QV-----DPKKDTIQALIVVPTRELALQTSQICIELAKHTD---IRVMVTTGGTNLRDDI 764
+ P T + LI+ PTREL SQIC L T+ +++ V GG + I
Sbjct: 132 ALMKAGTKPAPRTCRGLILAPTRELV---SQICESLRAFTEGSHLKLQVIVGGVAIGPQI 188
Query: 765 MRIYQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
R + +I+ATPGR+IDL+D++ R+ + R LVL
Sbjct: 189 KRAERGADLIVATPGRLIDLLDRKALRLSETRFLVL 224
>UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n=4;
Eukaryota|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 470
Score = 103 bits (248), Expect = 5e-21
Identities = 54/161 (33%), Positives = 93/161 (57%), Gaps = 1/161 (0%)
Frame = +3
Query: 393 IKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGT 572
++ D D FE+ + EL E GW++P+ IQ +IPIALSGKD++ A+ G+
Sbjct: 30 VEEDDDKDDDTPTFEDLGVCVELCRACKELGWKRPTKIQIEAIPIALSGKDIIGLAETGS 89
Query: 573 GKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNL 752
GKT A+ IP+L+++ K + +LI+ PTREL+LQ + I L + V + GG ++
Sbjct: 90 GKTAAFTIPILQKLLEKPQRLFSLILAPTRELSLQIKEQLISLGSEIGLDVCLILGGLDM 149
Query: 753 RDDIMRIYQNVQVIIATPGRMID-LMDKQVARMDQCRMLVL 872
+++ + +I+ +PGR+ D L + + ++ + LVL
Sbjct: 150 VSQALQLSKKPHIIVGSPGRIADHLQNTKGFSLETIKYLVL 190
>UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 727
Score = 103 bits (248), Expect = 5e-21
Identities = 64/172 (37%), Positives = 97/172 (56%), Gaps = 11/172 (6%)
Frame = +3
Query: 351 GWKSKLKIPPKDRRIKTSDVTDTRG-------NEFEEFCLKRELLMGIFEKGWEKPSPIQ 509
G K + K KD + + +T+ + F +F L ++ L G+ + + KP+ IQ
Sbjct: 30 GGKPRFKFSMKDEESEIARLTELYATAKIEETSSFSDFPLSKKTLGGLKQGQYHKPTAIQ 89
Query: 510 EASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVD----PKKDTIQALIVVPTRELALQ 677
SI AL GKD+LA AK G+GKT A+ IPV E++ K D + ALI+ PTRELALQ
Sbjct: 90 RESILPALQGKDILAAAKTGSGKTLAFLIPVFEKLYTNQWTKLDGLGALIITPTRELALQ 149
Query: 678 TSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMIDLMDK 833
+ ++ K D + GG NL+ + R++Q + +II TPGR++ MD+
Sbjct: 150 IFETVAKIGKLHDFTTGLIIGGQNLKAEKNRLHQ-LNIIICTPGRLLQHMDQ 200
>UniRef50_Q9FNM7 Cluster: DEAD-box ATP-dependent RNA helicase 26;
n=14; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 26 - Arabidopsis thaliana (Mouse-ear cress)
Length = 850
Score = 103 bits (248), Expect = 5e-21
Identities = 65/158 (41%), Positives = 90/158 (56%), Gaps = 10/158 (6%)
Frame = +3
Query: 378 PKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLAR 557
P +KTSD ++ F++F L L I + G+E + +QEA++PI L GKDVLA+
Sbjct: 367 PTGEHVKTSDSYLSK-TRFDQFPLSPLSLKAIKDAGFETMTVVQEATLPIILQGKDVLAK 425
Query: 558 AKNGTGKTGAYCIPVLEQV--------DPKKDTIQALIVVPTRELALQTSQICIELAK-H 710
AK GTGKT A+ +P +E V D ++ I L+V PTRELA Q + L K H
Sbjct: 426 AKTGTGKTVAFLLPAIEAVIKSPPASRDSRQPPIIVLVVCPTRELASQAAAEANTLLKYH 485
Query: 711 TDIRVMVTTGGTNLRDDIMRIYQN-VQVIIATPGRMID 821
I V V GGT L + R+ N Q+++ATPGR+ D
Sbjct: 486 PSIGVQVVIGGTKLPTEQRRMQTNPCQILVATPGRLKD 523
>UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP10
- Saccharomyces cerevisiae (Baker's yeast)
Length = 995
Score = 103 bits (248), Expect = 5e-21
Identities = 51/140 (36%), Positives = 86/140 (61%), Gaps = 2/140 (1%)
Frame = +3
Query: 411 TDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAY 590
T + F F L + +L I KG+ +P+PIQ +IP+ L +D++ A+ G+GKT A+
Sbjct: 132 TKHKKGSFPSFGLSKIVLNNIKRKGFRQPTPIQRKTIPLILQSRDIVGMARTGSGKTAAF 191
Query: 591 CIPVLEQVDPKKDTI--QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDI 764
+P++E++ I +A+I+ P+RELA+QT + + A+ T++R ++ TGG +L +
Sbjct: 192 ILPMVEKLKSHSGKIGARAVILSPSRELAMQTFNVFKDFARGTELRSVLLTGGDSLEEQF 251
Query: 765 MRIYQNVQVIIATPGRMIDL 824
+ N VIIATPGR + L
Sbjct: 252 GMMMTNPDVIIATPGRFLHL 271
>UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3); n=1; Apis mellifera|Rep: PREDICTED: similar
to Probable ATP-dependent RNA helicase DDX20 (DEAD box
protein 20) (DEAD box protein DP 103) (Component of gems
3) (Gemin-3) - Apis mellifera
Length = 648
Score = 103 bits (247), Expect = 6e-21
Identities = 52/141 (36%), Positives = 89/141 (63%), Gaps = 1/141 (0%)
Frame = +3
Query: 453 RELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDT 632
+++L G+ G+++PSPIQ +IP+ G D++ RAK+GTGKT +CI LE +D +
Sbjct: 5 QKILDGLSVCGFQRPSPIQLKAIPLGRCGFDLIMRAKSGTGKTLVFCIISLEMIDIDISS 64
Query: 633 IQALIVVPTRELALQTSQICIEL-AKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPG 809
+Q LI+ PTRE+A+Q +Q+ + + D++V V GG + +D ++ N Q+ + PG
Sbjct: 65 VQVLILAPTREIAVQIAQVFSSVGCEIKDLKVEVFIGGLAIENDKKKV-NNCQIAVGAPG 123
Query: 810 RMIDLMDKQVARMDQCRMLVL 872
R+ L+DK +++ R+ VL
Sbjct: 124 RIRHLIDKGFLKVENVRLFVL 144
>UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18;
Bacteria|Rep: ATP-dependent RNA helicase DeaD - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 658
Score = 103 bits (247), Expect = 6e-21
Identities = 53/148 (35%), Positives = 87/148 (58%), Gaps = 1/148 (0%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F + L+ LL + E G+E PSPIQ IP L+G D+L A+ GTGKT A+ +P+L++
Sbjct: 46 FAQLDLRAPLLDALSEIGYETPSPIQAICIPHLLAGHDLLGEAQTGTGKTAAFALPLLDR 105
Query: 612 VDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGGTNLRDDIMRIYQNVQ 788
+D Q L++ PTRELA+Q ++ AK+ V+ GG ++ + ++ +
Sbjct: 106 LDLAVKNPQVLVLAPTRELAIQVAEAFQRYAKNLPGFHVLPVYGGQSMVVQLRQLARGAH 165
Query: 789 VIIATPGRMIDLMDKQVARMDQCRMLVL 872
VI+ TPGR++D ++++ +D LVL
Sbjct: 166 VIVGTPGRVMDHIERKSLNLDSLTTLVL 193
>UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia
psychrerythraea 34H|Rep: RNA helicase DeaD - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 611
Score = 103 bits (247), Expect = 6e-21
Identities = 53/160 (33%), Positives = 86/160 (53%), Gaps = 1/160 (0%)
Frame = +3
Query: 396 KTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTG 575
KT VT+ F L LL + G+ + IQ +IP L+GKDVL A+ GTG
Sbjct: 5 KTETVTEPEAVAFASLGLPENLLSAVLSIGFTSATDIQALTIPPLLAGKDVLGEAQTGTG 64
Query: 576 KTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGGTNL 752
KT A+ +P L ++D Q +++ PTRELA+Q ++ K +RV GG +
Sbjct: 65 KTAAFGLPALAKIDTSIKKPQLMVLAPTRELAMQVAEAIESFGKDMKGLRVATLYGGQSY 124
Query: 753 RDDIMRIYQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
++ + QV++ TPGR++D + ++ ++D+ R+ VL
Sbjct: 125 GPQFQQLERGAQVVVGTPGRLMDHLRRKSLKLDELRVCVL 164
>UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1;
Thiomicrospira crunogena XCL-2|Rep: ATP-dependent RNA
helicase - Thiomicrospira crunogena (strain XCL-2)
Length = 401
Score = 103 bits (247), Expect = 6e-21
Identities = 55/150 (36%), Positives = 85/150 (56%), Gaps = 3/150 (2%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
FEE L +LL I E+ + KP+PIQ +IP L KDVLA A GTGKT A+ +P L+
Sbjct: 3 FEELDLDPKLLTAIEEQHYHKPTPIQAEAIPEMLLSKDVLAGAATGTGKTAAFVLPALQF 62
Query: 612 V--DPKKD-TIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQN 782
+ DP+ + LI+ PTRELA Q ++ +L H V TGG + +
Sbjct: 63 LLDDPRPSRKPRVLILAPTRELAFQIHKVVKQLGAHCPFESNVVTGGFASDKQLEILQSK 122
Query: 783 VQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+ +++ATPGR++++M K+ + +L++
Sbjct: 123 IDILVATPGRLLNIMSKEFIDLSDIELLII 152
>UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain; n=18;
Pseudomonadaceae|Rep: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain - Azotobacter
vinelandii AvOP
Length = 575
Score = 103 bits (247), Expect = 6e-21
Identities = 51/139 (36%), Positives = 82/139 (58%), Gaps = 1/139 (0%)
Frame = +3
Query: 459 LLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQ 638
+L I G+E+PSPIQ +IP+ L+G D++ +A+ GTGKT A+ +P+L ++DP + Q
Sbjct: 34 VLAAITAVGYEEPSPIQAQAIPVILAGHDMIGQAQTGTGKTAAFALPMLSRIDPARREPQ 93
Query: 639 ALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRM 815
LI+ PTRELALQ + A + V+ GG + + + Q Q+++ATPGR+
Sbjct: 94 LLILAPTRELALQVATAFETYASQLPGVGVVAVYGGAPMGPQLKALRQGAQILVATPGRL 153
Query: 816 IDLMDKQVARMDQCRMLVL 872
D + + + + LVL
Sbjct: 154 CDHLRRDEQLLSTVKHLVL 172
>UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein;
n=2; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 541
Score = 103 bits (247), Expect = 6e-21
Identities = 59/212 (27%), Positives = 112/212 (52%), Gaps = 9/212 (4%)
Frame = +3
Query: 264 TENRISSSNHVGNSISQTKGEVDKSIDDVGWKSKLKIPPKDRRI-KTSDVTDTRGN---- 428
T +++S S + N K D+ I+D+ ++K D + + +DV GN
Sbjct: 63 TGDQLSRSRSMPNP---PKAITDEEIEDLFMRNKASTDGPDISVYEGADVKVEAGNHIPP 119
Query: 429 --EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPV 602
+F ++ E+L + G++ P+P+Q SIP L+G+D++ ++ G+GKT A+ +PV
Sbjct: 120 IIDFPGCGIRNEVLRNVAHNGYKVPTPVQRYSIPYILNGEDLIVTSQTGSGKTAAFMLPV 179
Query: 603 LEQV--DPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIY 776
+ Q+ + + PTRELA+Q + + K TD++ GG + + I +
Sbjct: 180 ITQLIGTCHSPNPSCVALCPTRELAIQIFEETRKFCKGTDLKTTCVFGGAPITEQIRNLS 239
Query: 777 QNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+ + ++IATPGR+ID++ + + + R L+L
Sbjct: 240 RGIDIVIATPGRLIDILKQHCITLSEVRFLIL 271
>UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog;
n=31; Bacteria|Rep: Cold-shock DEAD box protein A
homolog - Mycobacterium tuberculosis
Length = 563
Score = 103 bits (247), Expect = 6e-21
Identities = 52/148 (35%), Positives = 87/148 (58%), Gaps = 1/148 (0%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F + + +L I + G+E P+ IQ A+IP ++G DV+ A+ GTGKT A+ IP+L +
Sbjct: 15 FADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLSK 74
Query: 612 VDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGGTNLRDDIMRIYQNVQ 788
+D QAL++VPTRELALQ ++ + + + V+ GG++ + + + Q
Sbjct: 75 IDITSKVPQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSSYAVQLAGLRRGAQ 134
Query: 789 VIIATPGRMIDLMDKQVARMDQCRMLVL 872
V++ TPGRMID +++ + + LVL
Sbjct: 135 VVVGTPGRMIDHLERATLDLSRVDFLVL 162
>UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX23;
n=50; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX23 - Homo sapiens (Human)
Length = 820
Score = 103 bits (247), Expect = 6e-21
Identities = 66/204 (32%), Positives = 110/204 (53%), Gaps = 19/204 (9%)
Frame = +3
Query: 318 KGEVDKSIDDVGWKSKL--KIPPKDRRIKTSDVT-DTRGNE-------FEEFCLKRELLM 467
K E + DD W K ++ +D RI D + T+G + +++ L +L
Sbjct: 345 KKEAKQRWDDRHWSQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILE 404
Query: 468 GIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVD--PKKDTIQ- 638
I + G+++P+PIQ +IPI L +D++ A+ G+GKT A+ IP+L + PK D I+
Sbjct: 405 VIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEE 464
Query: 639 ------ALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIA 800
A+I+ PTRELA Q + I+ K IR + GG + D R+ +++IA
Sbjct: 465 SDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIA 524
Query: 801 TPGRMIDLMDKQVARMDQCRMLVL 872
TPGR+ID+++ + + +C +VL
Sbjct: 525 TPGRLIDVLENRYLVLSRCTYVVL 548
>UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducible
ATP-independent RNA helicase; n=2;
Enterobacteriaceae|Rep: Cold-shock DEAD-box protein A,
inducible ATP-independent RNA helicase - Blochmannia
floridanus
Length = 487
Score = 103 bits (246), Expect = 8e-21
Identities = 51/138 (36%), Positives = 79/138 (57%), Gaps = 2/138 (1%)
Frame = +3
Query: 426 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 605
N F + L ++ + G++ P PIQ IP+ L G D+L A G+GKT A+ +P+L
Sbjct: 6 NSFVDLGLNTYIVDMLSNIGYQAPLPIQTQCIPLLLKGCDLLGMAHTGSGKTAAFLLPLL 65
Query: 606 EQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTD--IRVMVTTGGTNLRDDIMRIYQ 779
+ +D K+ +Q LI+VPTRELA+Q +C+ K I + V GG N R + +
Sbjct: 66 QNIDIKQRFVQGLIIVPTRELAIQIGHVCMYFIKSLSHIINIAVLYGGQNYRIQFNDLKK 125
Query: 780 NVQVIIATPGRMIDLMDK 833
N +II TPGR++D + +
Sbjct: 126 NPHIIIGTPGRLLDHLSR 143
>UniRef50_Q21EB3 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Saccharophagus degradans (strain 2-40 / ATCC
43961 / DSM 17024)
Length = 436
Score = 103 bits (246), Expect = 8e-21
Identities = 54/151 (35%), Positives = 90/151 (59%), Gaps = 3/151 (1%)
Frame = +3
Query: 429 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 608
EF E L + L + + + KP+ +Q +IP L+GKD++ AK G+GKT A+ +P+L
Sbjct: 2 EFSELGLHQSLQKALDKLTFTKPTDVQVQTIPAVLAGKDIMVSAKTGSGKTAAFLLPMLH 61
Query: 609 QV--DPKKDT-IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQ 779
+ DP+ +T +ALI++PTRELALQT + + A +T I+V + GG + + + +
Sbjct: 62 KFLNDPRPNTSTRALILLPTRELALQTVKAFEQFAGYTQIKVGLIMGGEAYKHQVATVRK 121
Query: 780 NVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
N +V++ATPGR+++ + LVL
Sbjct: 122 NPEVLVATPGRLVEHIKNGNVDFSDLEFLVL 152
>UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=6;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - alpha proteobacterium HTCC2255
Length = 531
Score = 103 bits (246), Expect = 8e-21
Identities = 52/152 (34%), Positives = 91/152 (59%), Gaps = 5/152 (3%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F + L E++ + G+ P+PIQ +IP L+ KD++ A+ GTGKT A+ +P+++Q
Sbjct: 105 FSKLGLDAEIVKALGFLGYTLPTPIQSQAIPAVLNSKDLVGLAQTGTGKTAAFALPLIQQ 164
Query: 612 V--DP---KKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIY 776
+ +P K + +A+I+ PTRELALQ + + K + GG +R + +
Sbjct: 165 LLMNPIAIKGRSARAIILSPTRELALQIHEAFVSFGKRLPLNFTHAIGGAPIRKQMRDLS 224
Query: 777 QNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+ V +++ATPGR+ DL+D++ R+D+ + LVL
Sbjct: 225 KGVDILVATPGRLEDLVDQKGLRLDETKFLVL 256
>UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 755
Score = 103 bits (246), Expect = 8e-21
Identities = 54/134 (40%), Positives = 81/134 (60%), Gaps = 4/134 (2%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F+E L R L G++KP+PIQ A IPIA++G+DV RA G+GKT A+ +P LE+
Sbjct: 150 FDELHLSRPLTRACEALGYKKPTPIQAAVIPIAMTGRDVCGRAVTGSGKTAAFMLPQLER 209
Query: 612 V---DPK-KDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQ 779
+ P+ L++VPTRELA+Q Q+ LA+ T IR ++ GG + +
Sbjct: 210 MLHRGPRPAAATHVLVLVPTRELAVQVHQMTESLAQFTTIRAVLVVGGLSANVQAAALRT 269
Query: 780 NVQVIIATPGRMID 821
++++ATPGR+ID
Sbjct: 270 RPEIVVATPGRVID 283
>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Xylella
fastidiosa
Length = 614
Score = 102 bits (245), Expect = 1e-20
Identities = 52/148 (35%), Positives = 87/148 (58%), Gaps = 1/148 (0%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F + L ++ + + G+E PSPIQ A+IP L+G+DVL +A+ GTGKT A+ +P+L +
Sbjct: 17 FADLGLSDAVMQAVTKIGYETPSPIQAATIPALLAGRDVLGQAQTGTGKTAAFALPLLTR 76
Query: 612 VDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGGTNLRDDIMRIYQNVQ 788
+ Q L++ PTRELA+Q ++ A + RV+ GG + + + + V
Sbjct: 77 TVLNQVKPQVLVLAPTRELAIQVAEAFQRYAASISGFRVLPVYGGQSYGQQLAALKRGVH 136
Query: 789 VIIATPGRMIDLMDKQVARMDQCRMLVL 872
VI+ TPGR+ID +++ + + + LVL
Sbjct: 137 VIVGTPGRVIDHLERGTLDLSELKTLVL 164
>UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1;
Pseudoalteromonas atlantica T6c|Rep: DEAD/DEAH box
helicase-like - Pseudoalteromonas atlantica (strain T6c
/ BAA-1087)
Length = 458
Score = 102 bits (245), Expect = 1e-20
Identities = 55/151 (36%), Positives = 92/151 (60%), Gaps = 5/151 (3%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
FE L+ EL+ I +G+ + IQ +IP+ L+ D+LA A+ GTGKT A+ +P+L++
Sbjct: 3 FEALGLRDELIHAIATQGYSVATDIQREAIPLVLAQHDLLAVAQTGTGKTAAFTLPLLQR 62
Query: 612 VDPKKDT----IQALIVVPTRELALQTSQICIEL-AKHTDIRVMVTTGGTNLRDDIMRIY 776
+ K+ T +++LIV PTRELA Q + I +E+ + +IR GG + I ++
Sbjct: 63 LAAKQSTKVQGVRSLIVTPTRELAAQVA-ISVEIYSTQLNIRSFAVYGGVRIEPQIAQLQ 121
Query: 777 QNVQVIIATPGRMIDLMDKQVARMDQCRMLV 869
+ V V+IATPGR++DL +++ + +LV
Sbjct: 122 EGVDVLIATPGRLLDLYEQRALHFENLEILV 152
>UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep:
Vasa-like protein - Anopheles gambiae (African malaria
mosquito)
Length = 596
Score = 102 bits (245), Expect = 1e-20
Identities = 51/154 (33%), Positives = 92/154 (59%), Gaps = 7/154 (4%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
FE L+ E++ + + + KP+PIQ +IPI L+G+D++A A+ G+GKT A+ +P++
Sbjct: 176 FERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLMACAQTGSGKTAAFMLPMIHH 235
Query: 612 VDPKKDTIQ-------ALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMR 770
+ K+D+++ +IV PTRELA+Q + A T ++V V+ GGT ++ +
Sbjct: 236 LLDKEDSLELRTRNPYIVIVAPTRELAIQIHDEGRKFAHGTKLKVCVSYGGTAVQHQLQL 295
Query: 771 IYQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+ V++ATPGR++D +D+ + +VL
Sbjct: 296 MRGGCHVLVATPGRLLDFIDRGYVTFENVNFVVL 329
>UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82;
Proteobacteria|Rep: ATP-dependent RNA helicase srmB -
Escherichia coli (strain K12)
Length = 444
Score = 102 bits (245), Expect = 1e-20
Identities = 55/139 (39%), Positives = 82/139 (58%), Gaps = 4/139 (2%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F E L LL + +KG+ +P+ IQ A+IP AL G+DVL A GTGKT AY +P L+
Sbjct: 6 FSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLLPALQH 65
Query: 612 V--DPKKDT--IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQ 779
+ P+K + + LI+ PTRELA+Q S ELAKHT + + TGG + +
Sbjct: 66 LLDFPRKKSGPPRILILTPTRELAMQVSDHARELAKHTHLDIATITGGVAYMNHAEVFSE 125
Query: 780 NVQVIIATPGRMIDLMDKQ 836
N +++AT GR++ + ++
Sbjct: 126 NQDIVVATTGRLLQYIKEE 144
>UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX59;
n=34; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX59 - Homo sapiens (Human)
Length = 619
Score = 102 bits (245), Expect = 1e-20
Identities = 54/149 (36%), Positives = 89/149 (59%), Gaps = 1/149 (0%)
Frame = +3
Query: 429 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 608
+FE L L + + G+E P+PIQ IP+ L G+D+LA A G+GKT A+ +PV+
Sbjct: 204 DFEHCSLPEVLNHNLKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVIM 263
Query: 609 QVDPKKDTIQALIVVPTRELALQTSQICIELAKHTD-IRVMVTTGGTNLRDDIMRIYQNV 785
+ + T ALI+ PTRELA+Q + EL ++ ++ GG L + R+ Q+V
Sbjct: 264 RALFESKTPSALILTPTRELAIQIERQAKELMSGLPRMKTVLLVGGLPLPPQLYRLQQHV 323
Query: 786 QVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+VIIATPGR++D++ + + +++V+
Sbjct: 324 KVIIATPGRLLDIIKQSSVELCGVKIVVV 352
>UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP4 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 770
Score = 102 bits (245), Expect = 1e-20
Identities = 58/166 (34%), Positives = 96/166 (57%), Gaps = 5/166 (3%)
Frame = +3
Query: 390 RIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNG 569
+I D T+ F++ + L G+ E + K + IQ SIP++L G DVLA AK G
Sbjct: 29 KIDEYDPKITKAKFFKDLPISDPTLKGLRESSFIKLTEIQADSIPVSLQGHDVLAAAKTG 88
Query: 570 TGKTGAYCIPVLEQVDPKK----DTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTT 737
+GKT A+ +PV+E++ +K D + ALI+ PTRELA+Q ++ ++ HT +
Sbjct: 89 SGKTLAFLVPVIEKLYREKWTEFDGLGALIISPTRELAMQIYEVLTKIGSHTSFSAGLVI 148
Query: 738 GGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVA-RMDQCRMLVL 872
GG +++ ++ RI + ++I TPGR++ +D+ V +MLVL
Sbjct: 149 GGKDVKFELERI-SRINILIGTPGRILQHLDQAVGLNTSNLQMLVL 193
>UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1;
Oceanobacter sp. RED65|Rep: ATP-dependent RNA helicase -
Oceanobacter sp. RED65
Length = 475
Score = 102 bits (244), Expect = 1e-20
Identities = 53/154 (34%), Positives = 93/154 (60%), Gaps = 7/154 (4%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F +F L ++ I + G+ SPIQ ++P L+G+D++ +A+ GTGKT A+ I VL++
Sbjct: 100 FHDFNLDARIMRSIQDLGFSYASPIQAEALPYTLAGRDIIGKAQTGTGKTAAFLITVLQK 159
Query: 612 ---VDPKK---DTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 773
V P++ +ALI+ PTRELA+Q ++ L+K+ D+ ++ GG + ++
Sbjct: 160 LLTVKPEERFASEPRALILAPTRELAMQIAKDADGLSKYADLNIVTVLGGVDYDKQKEQL 219
Query: 774 YQN-VQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
V V++ATPGR++D + + + +DQ MLV+
Sbjct: 220 ENEVVDVVVATPGRLLDYLQQGIVYLDQVEMLVI 253
>UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DEAH
box helicase-like; n=1; Clostridium phytofermentans
ISDg|Rep: Helicase-like:DbpA, RNA-binding:DEAD/DEAH box
helicase-like - Clostridium phytofermentans ISDg
Length = 483
Score = 102 bits (244), Expect = 1e-20
Identities = 46/149 (30%), Positives = 86/149 (57%)
Frame = +3
Query: 426 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 605
N+F ++ L E++ + + +P+PIQE IP+AL GKD++A++K G+GKT A+ IP+
Sbjct: 4 NKFTQYKLCEEIIQALSMLHYIEPTPIQEKVIPLALEGKDIIAKSKTGSGKTAAFAIPIC 63
Query: 606 EQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNV 785
E + +++ QAL++ PTRELA Q + + ++V V GG + + Q
Sbjct: 64 ESIVWEENLPQALVLEPTRELAYQVKDEIFNVGRMKRVKVPVVFGGFPFDKQALTLKQKS 123
Query: 786 QVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+++ TPGR++D + + + +++
Sbjct: 124 HIVVGTPGRVLDHCETGTLKCSNVKYVII 152
>UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6;
Plasmodium|Rep: Snrnp protein, putative - Plasmodium
falciparum (isolate 3D7)
Length = 1123
Score = 102 bits (244), Expect = 1e-20
Identities = 52/156 (33%), Positives = 89/156 (57%), Gaps = 8/156 (5%)
Frame = +3
Query: 429 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 608
++EE L +LL I + +EKP+PIQ +IPIAL +D++ A+ G+GKT A+ +P+L
Sbjct: 699 KWEESNLSNDLLKAIKKAKYEKPTPIQMQAIPIALEMRDLIGIAETGSGKTAAFVLPMLS 758
Query: 609 QV--------DPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDI 764
V + +D AL++ P+RELA+Q + + A + R + GG N
Sbjct: 759 YVKQLPPLTYETSQDGPYALVIAPSRELAIQIYEETNKFASYCSCRTVAVVGGRNAEAQA 818
Query: 765 MRIYQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+ + V+++I TPGR+ D ++K ++QC ++L
Sbjct: 819 FELRRGVEIVIGTPGRLQDCLEKAYTVLNQCNYVIL 854
>UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
eIF4A - Encephalitozoon cuniculi
Length = 425
Score = 102 bits (244), Expect = 1e-20
Identities = 49/147 (33%), Positives = 89/147 (60%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
+E++ LK +LL GI+ G+E PS IQ+A+I + G+D+ A+A++GTGKTGA+ + L+
Sbjct: 40 WEDYGLKEDLLKGIYSIGFETPSFIQKAAIQPIIDGRDIRAQAQSGTGKTGAFAVAALQI 99
Query: 612 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQV 791
D +D Q L++ TRE+A Q + +L RV + +GG+ + D + + + +
Sbjct: 100 CDMSQDVTQILVLASTREIAAQNAARFEDLGCFMGARVALLSGGSPIAADKVALEKKPHI 159
Query: 792 IIATPGRMIDLMDKQVARMDQCRMLVL 872
++ TPGR+ +++ MD ++ V+
Sbjct: 160 VVGTPGRVEHMININELSMDNIKLFVI 186
>UniRef50_Q13206 Cluster: Probable ATP-dependent RNA helicase DDX10;
n=24; Coelomata|Rep: Probable ATP-dependent RNA helicase
DDX10 - Homo sapiens (Human)
Length = 875
Score = 102 bits (244), Expect = 1e-20
Identities = 65/200 (32%), Positives = 109/200 (54%), Gaps = 5/200 (2%)
Frame = +3
Query: 288 NHVGNSISQTKGEVDKSIDDVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLM 467
+H N Q + ++ K V +S ++ +I +++T F +F L ++ L
Sbjct: 28 SHRQNKKKQLRKQLKKPEWQVERESISRLMQNYEKINVNEIT-----RFSDFPLSKKTLK 82
Query: 468 GIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVD----PKKDTI 635
G+ E + + IQ+ +I +AL GKDVL AK G+GKT A+ +PVLE + D +
Sbjct: 83 GLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEALYRLQWTSTDGL 142
Query: 636 QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRM 815
LI+ PTRELA QT ++ ++ K+ D + GG +L+ + RI N+ +++ TPGR+
Sbjct: 143 GVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKDLKHEAERI-NNINILVCTPGRL 201
Query: 816 IDLMDKQVA-RMDQCRMLVL 872
+ MD+ V+ +MLVL
Sbjct: 202 LQHMDETVSFHATDLQMLVL 221
>UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 393
Score = 101 bits (243), Expect = 2e-20
Identities = 54/149 (36%), Positives = 87/149 (58%), Gaps = 2/149 (1%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
FEE L LL + + G ++PS IQ +IP L GKDVL ++ G+GKT A+ +P+L++
Sbjct: 22 FEELGLIAPLLATLAQAGHKRPSLIQTQAIPPLLEGKDVLVGSQTGSGKTAAFVLPMLQK 81
Query: 612 VDPKKDTI--QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNV 785
+ +ALI+ PTRELA QT+ +C +L + ++ V GGT+ + + V
Sbjct: 82 LTEAGPAPGPRALILEPTRELAAQTAAVCRQLGRRLSLKTRVICGGTSREQQVQSVSDGV 141
Query: 786 QVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+I+AT GR++DL+ + ++ LVL
Sbjct: 142 DIIVATHGRLLDLVMQADLVLEHLTYLVL 170
>UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: DEAD/DEAH box
helicase-like protein - Psychroflexus torquis ATCC
700755
Length = 255
Score = 101 bits (243), Expect = 2e-20
Identities = 50/147 (34%), Positives = 87/147 (59%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F+ + L L G+ + GWE + +Q ++PIA G DV+ +A+ G+GKT A+ +P+LE+
Sbjct: 7 FDSWELPDALRTGLAQLGWEFATQVQRDTVPIARQGTDVIGQARTGSGKTAAFGLPILER 66
Query: 612 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQV 791
P +QAL++ PTRELA Q +Q L + + ++ GGT+L + + V +
Sbjct: 67 CQP-SGKLQALVLAPTRELANQVAQEFELLQGNAGLSIVTVYGGTDLEKQAKTLAKGVDI 125
Query: 792 IIATPGRMIDLMDKQVARMDQCRMLVL 872
I+ TPGR++D+ ++ ++ +ML L
Sbjct: 126 IVGTPGRVMDMNERGHIDLNSPKMLCL 152
>UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Deltaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Desulfovibrio vulgaris subsp. vulgaris
(strain DP4)
Length = 577
Score = 101 bits (243), Expect = 2e-20
Identities = 44/128 (34%), Positives = 78/128 (60%)
Frame = +3
Query: 483 GWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTR 662
GW+ P+Q ++P G+D++ +++ G+GKTGA+ +P+LE++DP + + QAL++VPTR
Sbjct: 56 GWQSLMPVQAHALPYLFDGRDLMVQSRTGSGKTGAFLLPLLERLDPAEASTQALVLVPTR 115
Query: 663 ELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVA 842
ELALQ L + T +RV GG + + ++ TPGR++D + ++
Sbjct: 116 ELALQVEHEARTLFEGTGLRVAAVYGGVGYGKQNDALREGAHFVVGTPGRVLDHLLRRTM 175
Query: 843 RMDQCRML 866
++D+ R L
Sbjct: 176 QLDRLRAL 183
>UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila
melanogaster|Rep: GH10652p - Drosophila melanogaster
(Fruit fly)
Length = 818
Score = 101 bits (243), Expect = 2e-20
Identities = 56/161 (34%), Positives = 89/161 (55%), Gaps = 5/161 (3%)
Frame = +3
Query: 405 DVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTG 584
D T EFEE ++ I ++G+ KP+ IQ PIA+SG+D++ A+ G+GKT
Sbjct: 150 DQVPTPSIEFEEGGFPDYVMNEIRKQGFAKPTAIQAQGWPIAMSGRDLVGVAQTGSGKTL 209
Query: 585 AYCIPVLEQVD-----PKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTN 749
AY +P + ++ + D AL++ PTRELA Q Q+ IE +T +R GG
Sbjct: 210 AYVLPAVVHINNQPRLERGDGPIALVLAPTRELAQQIQQVAIEFGSNTHVRNTCIFGGAP 269
Query: 750 LRDDIMRIYQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+ + V+++IATPGR+ID +++ + +C LVL
Sbjct: 270 KGQQARDLERGVEIVIATPGRLIDFLERGTTSLKRCTYLVL 310
>UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=55; Lactobacillales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Enterococcus faecalis
(Streptococcus faecalis)
Length = 449
Score = 101 bits (242), Expect = 2e-20
Identities = 50/142 (35%), Positives = 91/142 (64%), Gaps = 3/142 (2%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F++F + + + EKG+E+P+ +QE IPI GK V+ +++ G+GKT + +P++++
Sbjct: 4 FKQFQFQPFINEALAEKGFEEPTEVQEKLIPIIKKGKSVIGQSQTGSGKTHTFLLPLMDK 63
Query: 612 VDPKKDTIQALIVVPTRELALQTSQICIELAKHT--DIRVMVTTGGTNLRDDIMRI-YQN 782
V P D +Q +I P+RELA Q Q +LA+ + +IRV GGT+ + + ++ +Q
Sbjct: 64 VKPTIDEVQIVITAPSRELANQIYQEAQQLARFSQPEIRVSNFVGGTDKQRQLNKLKHQQ 123
Query: 783 VQVIIATPGRMIDLMDKQVARM 848
V+I TPGR++D+M++Q ++
Sbjct: 124 PHVVIGTPGRILDMMNEQALKV 145
>UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellular
organisms|Rep: ATP-dependent RNA helicase - Bdellovibrio
bacteriovorus
Length = 505
Score = 101 bits (242), Expect = 2e-20
Identities = 54/155 (34%), Positives = 90/155 (58%), Gaps = 7/155 (4%)
Frame = +3
Query: 429 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 608
+F + L L + E G+E P+PIQ A+IP+ L G D+L A+ GTGKT A+ +P+L+
Sbjct: 5 KFTDLPLIAPLQFSLKEAGYETPTPIQLAAIPVILEGHDLLGIAQTGTGKTAAFSLPILQ 64
Query: 609 -------QVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIM 767
+++PK + LI+ PTRELA+Q + +KH +++ V GG +
Sbjct: 65 NLSKHTRKIEPKSP--RCLILTPTRELAIQIHENIEAYSKHLNMKHAVIFGGVGQNPQVR 122
Query: 768 RIYQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+ V ++IATPGR++DL ++ ++D+ + VL
Sbjct: 123 ALQGGVDILIATPGRLMDLHGQKHLKLDRVEIFVL 157
>UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=7; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 542
Score = 101 bits (242), Expect = 2e-20
Identities = 51/153 (33%), Positives = 89/153 (58%), Gaps = 5/153 (3%)
Frame = +3
Query: 429 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 608
+F + L + LL + +KG+ P+PIQ +IP+ +SG+D+L A+ GTGKT A+ +P+L
Sbjct: 66 QFTDLGLAKPLLKALTDKGYTVPTPIQAQAIPLVMSGRDLLGIAQTGTGKTAAFALPILH 125
Query: 609 QV-DPKKDT----IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 773
++ + KK + L++ PTRELA Q ++ + KH + V GG + +
Sbjct: 126 RLAEDKKPAPRRGFRCLVLSPTRELATQIAESFRDYGKHMGLTVATIFGGVKYGPQMKAL 185
Query: 774 YQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
V V++ATPGR++D + ++ A ++ + VL
Sbjct: 186 AAGVDVVVATPGRLMDHLGEKSAHLNGVEIFVL 218
>UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA
helicase - Bacillus halodurans
Length = 389
Score = 101 bits (241), Expect = 3e-20
Identities = 47/150 (31%), Positives = 92/150 (61%), Gaps = 1/150 (0%)
Frame = +3
Query: 426 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 605
N+F+++ + L + +G +P+ IQ+ IP AL G++++ ++ GTGKT AY +P+L
Sbjct: 2 NQFQQWPIGEPFLEALTNQGITEPTEIQQQVIPEALDGQNLIVHSQTGTGKTLAYLLPML 61
Query: 606 EQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI-YQN 782
+ + + QALI+ PT+ELA+Q ++ +L T I V+ GG N++ + ++ +
Sbjct: 62 TKTEELPEQTQALILAPTQELAMQIVEVAKQLTATTSITVLPLIGGANIKRQVEKLKKKK 121
Query: 783 VQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
V + TPGR+++LM+ + ++ +M+V+
Sbjct: 122 PHVAVGTPGRILELMEMKKLKVPHVKMIVV 151
>UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3;
Alteromonadales|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 594
Score = 101 bits (241), Expect = 3e-20
Identities = 54/152 (35%), Positives = 84/152 (55%), Gaps = 2/152 (1%)
Frame = +3
Query: 423 GNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPV 602
G F + L +L + + P+PIQ +IP L G+DVL A+ GTGKT A+ +P
Sbjct: 7 GLSFNDMALPSAVLEQLNAMQFLTPTPIQLQAIPALLEGQDVLGEAQTGTGKTAAFGLPA 66
Query: 603 LEQVDPKKDTIQALIVVPTRELALQTSQICIE--LAKHTDIRVMVTTGGTNLRDDIMRIY 776
L ++D Q L+V PTRELA+Q ++ +E AK + V GG + +
Sbjct: 67 LAKIDASVKQTQVLVVTPTRELAIQVAE-ALEGFAAKMRGVGVATVYGGAPFGPQVKALK 125
Query: 777 QNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
Q +++ TPGR+IDL++K V ++D ++ VL
Sbjct: 126 QGTAIVVGTPGRLIDLLNKNVLQLDGLKVGVL 157
>UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3;
Sphingomonadales|Rep: DNA and RNA helicase - Zymomonas
mobilis
Length = 492
Score = 101 bits (241), Expect = 3e-20
Identities = 50/150 (33%), Positives = 91/150 (60%), Gaps = 3/150 (2%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F + L +ELL + E G+E+P+P+Q A+IP L +D++A A+ GTGKT ++ +P+++
Sbjct: 3 FADLGLSKELLQAVAELGYEEPTPVQAAAIPSVLMMRDLIAVAQTGTGKTASFVLPMIDI 62
Query: 612 VDP---KKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQN 782
+ + ++LI+ PTRELA Q ++ + K+ + + + GG + + + +
Sbjct: 63 LAHGRCRARMPRSLILEPTRELAAQVAENFEKYGKYHKLSMSLLIGGVPMAEQQAALEKG 122
Query: 783 VQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
V V+IATPGR++DL ++ + C MLV+
Sbjct: 123 VDVLIATPGRLLDLFERGKILLSSCEMLVI 152
>UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=5;
Bacteria|Rep: Possible ATP-dependent RNA helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 388
Score = 101 bits (241), Expect = 3e-20
Identities = 55/153 (35%), Positives = 90/153 (58%), Gaps = 6/153 (3%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE- 608
F L +L + ++ + P PIQE +IP L GKD+L A+ G+GKT ++ +P+L+
Sbjct: 11 FATLGLSPAILKALEKQFYNAPYPIQEQAIPAILKGKDILGIAQTGSGKTASFVLPILQM 70
Query: 609 -QVDP--KKDTIQALIVVPTRELALQTSQI--CIELAKHTDIRVMVTTGGTNLRDDIMRI 773
Q P K I AL++VPTRELA+Q Q+ A I+ + GG ++ ++++
Sbjct: 71 LQTKPLGKNRHINALVLVPTRELAVQVGQVFQAFSNALPNKIKSLAVYGGVSINPQMIQL 130
Query: 774 YQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
Q V+++IATPGR++DL+D + + +LVL
Sbjct: 131 -QGVEILIATPGRLLDLVDSKAVYLSDVEVLVL 162
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 101 bits (241), Expect = 3e-20
Identities = 49/132 (37%), Positives = 80/132 (60%), Gaps = 1/132 (0%)
Frame = +3
Query: 480 KGWEKPSPIQEASIPIALS-GKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVP 656
KG+++PSPIQE +IP+ LS D++ +A+ GTGKT A+ +P++++++P QALI+ P
Sbjct: 20 KGFKEPSPIQEQAIPVLLSQDHDIIGQAQTGTGKTAAFGLPIVQKIEPGLKKPQALILCP 79
Query: 657 TRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQ 836
TRELA+Q ++ K I + GG + D + + V +++ATPGR I ++
Sbjct: 80 TRELAIQVNEEIKSFCKGRGITTVTLYGGAPIMDQKRALKKGVDLVVATPGRCIHFIEDG 139
Query: 837 VARMDQCRMLVL 872
+D LVL
Sbjct: 140 KLELDSLEYLVL 151
>UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1;
Planctomyces maris DSM 8797|Rep: ATP-dependent RNA
helicase - Planctomyces maris DSM 8797
Length = 445
Score = 101 bits (241), Expect = 3e-20
Identities = 52/154 (33%), Positives = 89/154 (57%), Gaps = 5/154 (3%)
Frame = +3
Query: 426 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 605
N F+E L + + E+ ++ P+PIQ +IP AL G+DVL A+ GTGKT A +P+L
Sbjct: 2 NTFQELKLIAPVQKALVEENYKIPTPIQAQTIPAALEGRDVLGCAQTGTGKTAALALPIL 61
Query: 606 EQVDP-KKDTIQ----ALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMR 770
Q+ + +I AL++ PTRELA+Q +H +R ++ GG + +
Sbjct: 62 NQLGKNSRKSIPHHPLALVLAPTRELAIQIGDSFDAYGRHLKLRSVLIYGGVGQGNQVKA 121
Query: 771 IYQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+ + +++ATPGR++DLM++ +++Q + VL
Sbjct: 122 LKRGAHILVATPGRLLDLMNQGHIKLNQLEVFVL 155
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 101 bits (241), Expect = 3e-20
Identities = 49/154 (31%), Positives = 88/154 (57%), Gaps = 1/154 (0%)
Frame = +3
Query: 414 DTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYC 593
DT+ + F L L + G+E +PIQ +IP+ L G+DV+ A+ GTGKT A+
Sbjct: 5 DTQPSRFNSLGLPDFLQENLQSLGYETATPIQAGTIPLLLEGRDVVGLAQTGTGKTAAFA 64
Query: 594 IPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHT-DIRVMVTTGGTNLRDDIMR 770
+P+L +D K + QAL++ PTRELA Q ++ + +R++ GG ++R +
Sbjct: 65 LPILANIDVKVRSPQALVLCPTRELAQQVAEAFRSYGRGMGGLRILSIFGGADMRQQLKS 124
Query: 771 IYQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+ + +++ATPGR++D ++++ + +VL
Sbjct: 125 LREGTHIVVATPGRLLDHIERRSIDLTGINAVVL 158
>UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase RhlE;
n=1; Campylobacter fetus subsp. fetus 82-40|Rep:
Putative ATP-dependent RNA helicase RhlE - Campylobacter
fetus subsp. fetus (strain 82-40)
Length = 624
Score = 101 bits (241), Expect = 3e-20
Identities = 50/151 (33%), Positives = 85/151 (56%), Gaps = 5/151 (3%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F +F L +L + E ++ P+ IQ+ +IP + GKD+LA A+ GTGKT A+ +P+LE+
Sbjct: 3 FSDFDLSSAILEALKELNYDAPTQIQQVAIPAIMQGKDILAGARTGTGKTAAFALPILEK 62
Query: 612 V-----DPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIY 776
+ + K+ + L++VPTRELA Q +Q AK + + GG + I +
Sbjct: 63 LSSKERNKKRPQTRVLVLVPTRELANQVTQNIKSYAKKLPFKTLPVFGGVSSYPQIQALK 122
Query: 777 QNVQVIIATPGRMIDLMDKQVARMDQCRMLV 869
+ +++ATPGR++DL + ++ LV
Sbjct: 123 SGIDIVVATPGRLLDLALQNALSLEHIDTLV 153
>UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase PRP28,
putative; n=2; Eukaryota|Rep: Pre-mRNA splicing factor
RNA helicase PRP28, putative - Plasmodium vivax
Length = 1006
Score = 101 bits (241), Expect = 3e-20
Identities = 55/155 (35%), Positives = 89/155 (57%), Gaps = 8/155 (5%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL-- 605
+EE L +LL I + +EKP+PIQ +IPIAL +D++ A+ G+GKT A+ +P+L
Sbjct: 583 WEESNLSSDLLKAIKKAKYEKPTPIQMQAIPIALEMRDLIGIAETGSGKTAAFVLPMLAY 642
Query: 606 -EQVDP-----KKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIM 767
+Q+ P +D ALI+ P+RELA+Q + A + R + GG N
Sbjct: 643 VKQLPPLTYETSQDGPYALIIAPSRELAIQIFDETNKFASYCSCRTVAVVGGRNAEAQAF 702
Query: 768 RIYQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+ + V++II TPGR+ D ++K ++QC ++L
Sbjct: 703 ELRKGVEIIIGTPGRIHDCLEKAYTVLNQCNYVIL 737
>UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 515
Score = 101 bits (241), Expect = 3e-20
Identities = 50/134 (37%), Positives = 84/134 (62%), Gaps = 4/134 (2%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
FEE L ++ + + +E P+P+Q +IPIAL G+DV A A G+GKT A+ IP +E+
Sbjct: 18 FEELGLSHSIIRALHKMNFEIPTPVQNKTIPIALQGRDVCASAVTGSGKTAAFLIPTVER 77
Query: 612 VDPKKDT---IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGG-TNLRDDIMRIYQ 779
+ K T +A+I+ PTRELA QT + ++ + T + ++ TGG +N++++ R+ +
Sbjct: 78 LLRSKSTEAQTRAVILSPTRELAAQTYSVLSQIIQFTPLTALLLTGGSSNVKEEEERLLE 137
Query: 780 NVQVIIATPGRMID 821
++ TPGR+ID
Sbjct: 138 YPDFLVCTPGRIID 151
>UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=15; Pezizomycotina|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Gibberella zeae (Fusarium graminearum)
Length = 1227
Score = 101 bits (241), Expect = 3e-20
Identities = 53/139 (38%), Positives = 81/139 (58%), Gaps = 5/139 (3%)
Frame = +3
Query: 447 LKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVD--- 617
L R+ L + G+EKP+PIQ ++P +SG+DV+ AK G+GKT A+ +P+ +
Sbjct: 604 LTRQTLDVVDNLGYEKPTPIQMQALPALMSGRDVIGVAKTGSGKTVAFLLPMFRHIKDQP 663
Query: 618 PKKDTIQ--ALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQV 791
P KDT LI+ PTRELA+Q + C K +R + GG +R+ I + + ++
Sbjct: 664 PLKDTDGPIGLIMTPTRELAVQIHKDCKPFLKMMGLRAVCAYGGAPIREQIAELKRGAEI 723
Query: 792 IIATPGRMIDLMDKQVARM 848
I+ TPGRMIDL+ R+
Sbjct: 724 IVCTPGRMIDLLAANQGRV 742
>UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=1;
Oceanobacter sp. RED65|Rep: Probable ATP-dependent RNA
helicase - Oceanobacter sp. RED65
Length = 449
Score = 100 bits (240), Expect = 4e-20
Identities = 55/150 (36%), Positives = 88/150 (58%), Gaps = 3/150 (2%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F+ F L + +L GI G+ K + +Q+ +IP AL +D++ A+ G+GKT A+ +P+L+
Sbjct: 2 FQSFSLDQRILKGIEALGFTKATDVQQQTIPEALKQQDLMVCARTGSGKTAAFVVPMLQH 61
Query: 612 VDPKK---DTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQN 782
+ K +ALI+VPTRELA Q + C LAK T I+ + TGG + +N
Sbjct: 62 LLTHKAPNSGTRALILVPTRELAKQLLKQCQALAKFTGIQSGMITGGQEFKFQAALFRKN 121
Query: 783 VQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
++IIATPGR+ID + ++ M+ +L
Sbjct: 122 PEIIIATPGRLIDHLKQKKDLMEDVEYFIL 151
>UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 484
Score = 100 bits (240), Expect = 4e-20
Identities = 49/149 (32%), Positives = 82/149 (55%)
Frame = +3
Query: 426 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 605
+ F ++ L ELL I +E P+ +Q+ IP L KD++ +++ G+GKT A+ IP+
Sbjct: 4 SNFSDYQLSDELLKSISMLNFESPTKVQQQVIPAILEHKDIIVKSQTGSGKTAAFAIPIC 63
Query: 606 EQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNV 785
+ VD ++ QAL++VPTRELA+Q + + + ++V G + Q
Sbjct: 64 QLVDWDENKPQALVLVPTRELAIQVKEDMFNIGRFKRLKVAAVYGKAPFYHQEKELKQKT 123
Query: 786 QVIIATPGRMIDLMDKQVARMDQCRMLVL 872
V++ TPGR+ID M+K Q + LV+
Sbjct: 124 HVVVGTPGRIIDHMEKGTFDTSQIKYLVI 152
>UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Erythrobacter sp. NAP1
Length = 484
Score = 100 bits (240), Expect = 4e-20
Identities = 49/153 (32%), Positives = 89/153 (58%), Gaps = 5/153 (3%)
Frame = +3
Query: 429 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 608
+F + L + +L + KG+ P+PIQE +IP L G+D+L A+ GTGKT A+ +P ++
Sbjct: 3 QFSDLGLSQPVLQALDLKGYSTPTPIQEQAIPPVLEGRDLLGIAQTGTGKTAAFMLPSID 62
Query: 609 QVDPKKDTI-----QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 773
++ + I + L++ PTREL Q + + ++V GGT++ D ++
Sbjct: 63 RLREADNRIPFKSCRMLVLAPTRELVSQIAASAKDYGALAGLKVQSIVGGTSVNKDRNKL 122
Query: 774 YQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
++ ++IATPGR++DL+D++ + +LVL
Sbjct: 123 HRGTDILIATPGRLLDLIDQKAFNLGSVEVLVL 155
>UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 521
Score = 100 bits (240), Expect = 4e-20
Identities = 53/152 (34%), Positives = 83/152 (54%), Gaps = 5/152 (3%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
FEE L +E++ I E W P+PIQ SIPI L G D++ AK G+GKT ++ IP L
Sbjct: 87 FEELNLPQEIMEVIKENNWTNPTPIQSLSIPIGLKGNDMVGIAKTGSGKTASFLIPALMH 146
Query: 612 VDPKK-----DTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIY 776
+ ++ D L++ PTRELALQT ++ + + + GG + I ++
Sbjct: 147 ISAQRKISENDGPIVLVLSPTRELALQTDEVAAQFCVKMGYKHVCIYGGEDRHRQINKLR 206
Query: 777 QNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+ +++ ATPGR+ID + V ++ LVL
Sbjct: 207 FHPEIVTATPGRLIDFLQSGVFNPNRANFLVL 238
>UniRef50_A1IIT5 Cluster: RNA helicase; n=1; Neobenedenia
girellae|Rep: RNA helicase - Neobenedenia girellae
Length = 634
Score = 100 bits (240), Expect = 4e-20
Identities = 51/138 (36%), Positives = 83/138 (60%), Gaps = 12/138 (8%)
Frame = +3
Query: 495 PSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV-DPKKDTI-----------Q 638
P+P+Q +P+ L+G+D LA A+ G+GKT A+ +P+L+ V DP K + +
Sbjct: 229 PTPVQRFLLPVLLAGRDALATAQTGSGKTAAFMLPILKTVLDPSKGPVLGVAADGKPAPR 288
Query: 639 ALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMI 818
A++VVPT ELA Q ++ A T +RV +T GG N+R D+M++ V V++ATPGR++
Sbjct: 289 AIVVVPTHELAQQILFEGMKFATGTSVRVHLTHGGVNVRHDLMQLRSGVSVLVATPGRLL 348
Query: 819 DLMDKQVARMDQCRMLVL 872
+ + + C +VL
Sbjct: 349 HFIRSGLISLSMCNFIVL 366
>UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Lodderomyces elongisporus NRRL
YB-4239|Rep: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5 - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 994
Score = 100 bits (240), Expect = 4e-20
Identities = 56/145 (38%), Positives = 89/145 (61%), Gaps = 7/145 (4%)
Frame = +3
Query: 447 LKRELLMGIFEK--GWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL----E 608
L E +M + + G+ KPSPIQ +IPI LSG+D++ AK G+GKT +Y +P++ +
Sbjct: 393 LMPESVMSVIQNDLGFAKPSPIQCQAIPIVLSGRDMIGVAKTGSGKTLSYVLPMVRHIQD 452
Query: 609 QVDPKK-DTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNV 785
Q+ PK + L++ PTRELALQ + ++ + D++V GG+N+ + I + + V
Sbjct: 453 QLFPKPGEGPIGLVLSPTRELALQIEKEILKFSSTMDLKVCCCYGGSNIENQISELKRGV 512
Query: 786 QVIIATPGRMIDLMDKQVARMDQCR 860
VI+ATPGR+IDL+ R+ R
Sbjct: 513 NVIVATPGRLIDLLAANGGRITTLR 537
>UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6;
Proteobacteria|Rep: ATP-independent RNA helicase -
Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 460
Score = 100 bits (239), Expect = 6e-20
Identities = 53/148 (35%), Positives = 86/148 (58%), Gaps = 1/148 (0%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F L E L + E G+ + +P+Q A++P LSG DV A+AK G+GKT A+ I +L++
Sbjct: 6 FSSLALPAEQLSNLNELGYTEMTPVQAATLPAVLSGADVRAKAKTGSGKTAAFGIGLLDR 65
Query: 612 VDPKKDTIQALIVVPTRELALQTSQICIELAKHT-DIRVMVTTGGTNLRDDIMRIYQNVQ 788
+ T QAL++ PTRELA Q S+ LA+ +I+++ GG + + +
Sbjct: 66 IVVSDFTTQALVLCPTRELADQVSKELRRLARFAQNIKILTLCGGQPMGQQLDSLVHAPH 125
Query: 789 VIIATPGRMIDLMDKQVARMDQCRMLVL 872
+++ TPGR+ D + KQ +D ++LVL
Sbjct: 126 IVVGTPGRIQDHLRKQSLALDSLKVLVL 153
>UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=3; Clostridium perfringens|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family - Clostridium
perfringens (strain ATCC 13124 / NCTC 8237 / Type A)
Length = 405
Score = 100 bits (239), Expect = 6e-20
Identities = 47/151 (31%), Positives = 93/151 (61%), Gaps = 2/151 (1%)
Frame = +3
Query: 426 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 605
++F + L E+L + G E+P+ IQE +IP L GK+V+ +A+ GTGKT AY +P++
Sbjct: 2 DKFLKLGLSEEVLKSLVGLGIEEPTDIQEKAIPEILKGKNVIGKAETGTGKTLAYLLPII 61
Query: 606 EQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTT--GGTNLRDDIMRIYQ 779
E++D K+ +QA+I+ PT EL +Q + + +L + ++ TT G N++ + ++
Sbjct: 62 EKIDDSKNEMQAIILSPTHELGVQINNVLNDLKRGLGKKITSTTLVGSGNIKRQMEKLKN 121
Query: 780 NVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+++ T GR+++L++K+ + + +V+
Sbjct: 122 KPHILVGTTGRILELINKKKITTNTIKTIVI 152
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 100 bits (239), Expect = 6e-20
Identities = 59/170 (34%), Positives = 86/170 (50%), Gaps = 5/170 (2%)
Frame = +3
Query: 378 PKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLAR 557
P RR + T +F L LL I E+ +E P+PIQ SIP+ L G D++
Sbjct: 44 PSHRRSRDESAVLT---DFTTLGLAEPLLRAISEQSYETPTPIQARSIPVMLEGHDLVGI 100
Query: 558 AKNGTGKTGAYCIPVLEQV-----DPKKDTIQALIVVPTRELALQTSQICIELAKHTDIR 722
A+ GTGKT A+ +P+L ++ P +AL++ PTRELA Q + K T
Sbjct: 101 AQTGTGKTAAFVLPILHRIAANRARPAPRACRALVLAPTRELATQIADAARTYGKFTRPS 160
Query: 723 VMVTTGGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
V V GG R+ V +++ATPGR++D + V R+D +VL
Sbjct: 161 VAVVIGGAKPGPQARRMESGVDLLVATPGRLLDHVAAGVIRLDAVETVVL 210
>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
- Dehalococcoides sp. BAV1
Length = 561
Score = 100 bits (239), Expect = 6e-20
Identities = 47/131 (35%), Positives = 77/131 (58%), Gaps = 1/131 (0%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
FE F ++ G+ G+++P+PIQ +IP ++G DV+ A+ GTGKT AY +P++++
Sbjct: 3 FESFNFDPAVMAGVRACGYKEPTPIQAQAIPPIMAGHDVIGLAQTGTGKTAAYALPIIQK 62
Query: 612 -VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQ 788
+ + ++ L++ PTRELA Q S L + IR GG N+ I R+ V
Sbjct: 63 MLSTPRGRVRTLVIAPTRELACQISDSFRSLGQRARIRECSIYGGVNMDQQIRRLRSGVD 122
Query: 789 VIIATPGRMID 821
V++A PGR++D
Sbjct: 123 VVVACPGRLLD 133
>UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6;
Bacteroidetes|Rep: ATP-dependent RNA helicase -
Polaribacter irgensii 23-P
Length = 447
Score = 100 bits (239), Expect = 6e-20
Identities = 50/128 (39%), Positives = 77/128 (60%), Gaps = 2/128 (1%)
Frame = +3
Query: 495 PSPIQEASIPIALSGK-DVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELA 671
P+ IQE IPI L+ K D++A AK GTGKT A+ +P+L+ +D D IQA+I+ PTREL
Sbjct: 26 PTEIQEKVIPIVLNDKEDIVALAKTGTGKTAAFGLPLLQLIDVNNDAIQAIILAPTRELG 85
Query: 672 LQTSQICIELAKHT-DIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVARM 848
Q + I A+HT + + GG ++ I R+ + +I+ATPGR+ DL+ ++ +
Sbjct: 86 QQIAANLISFAEHTSQVSIATLCGGIPIKPQIERLKEATHIIVATPGRLADLVKREAIDI 145
Query: 849 DQCRMLVL 872
+L
Sbjct: 146 KSISYFIL 153
>UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=4; Flavobacteriaceae|Rep:
ATP-dependent RNA helicase, DEAD/DEAH box family protein
- Polaribacter dokdonensis MED152
Length = 373
Score = 100 bits (239), Expect = 6e-20
Identities = 51/145 (35%), Positives = 84/145 (57%), Gaps = 3/145 (2%)
Frame = +3
Query: 447 LKRELLMGIFEKGWEKPSPIQEASIPIAL-SGKDVLARAKNGTGKTGAYCIPVLEQVDPK 623
++++ + I E G KP+ IQE +IP+ L S D + A+ GTGKT A+ +PVL +D
Sbjct: 9 IRKDYIKSIKEIGITKPTDIQEKAIPVLLKSPTDFIGLAQTGTGKTAAFGLPVLHHIDAN 68
Query: 624 KDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTT--GGTNLRDDIMRIYQNVQVII 797
D IQALI+ PTREL Q + + K+ D R+ + GG + + + + ++I
Sbjct: 69 SDHIQALILSPTRELVQQIKKQLFKFTKYVDDRIFLEAVFGGEKIDRQMNNLKRTTHIVI 128
Query: 798 ATPGRMIDLMDKQVARMDQCRMLVL 872
ATPGR+IDL+++ + + ++L
Sbjct: 129 ATPGRLIDLIERGAVDISHVKTVIL 153
>UniRef50_Q7JQN4 Cluster: LD15481p; n=7; Endopterygota|Rep: LD15481p
- Drosophila melanogaster (Fruit fly)
Length = 782
Score = 100 bits (239), Expect = 6e-20
Identities = 57/152 (37%), Positives = 88/152 (57%), Gaps = 5/152 (3%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F + L R L+ I G+ P+PIQ ++IP+AL G+D+ A GTGKT AY +P LE+
Sbjct: 159 FYQMNLSRPLMRAIGVLGYIYPTPIQASTIPVALLGRDICGCAATGTGKTAAYMLPTLER 218
Query: 612 V--DP--KKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQ 779
+ P K + L++VPTREL Q Q+ +L + T I V + GG +++ + Q
Sbjct: 219 LLYRPLNNKAITRVLVLVPTRELGAQVYQVTKQLCQFTTIDVGLAIGGLDVKAQEAVLRQ 278
Query: 780 NVQVIIATPGRMID-LMDKQVARMDQCRMLVL 872
N ++IATPGR+ID + + +D +L+L
Sbjct: 279 NPDIVIATPGRLIDHIKNTPSFTLDSIEVLIL 310
>UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyostelium
discoideum|Rep: DEAD-box RNA helicase - Dictyostelium
discoideum AX4
Length = 465
Score = 100 bits (239), Expect = 6e-20
Identities = 53/148 (35%), Positives = 95/148 (64%), Gaps = 1/148 (0%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIAL-SGKDVLARAKNGTGKTGAYCIPVLE 608
FEE LK ELL G++ G+ KPS IQEA++PI + S +++A++++GTGKT A+ + +L
Sbjct: 72 FEELGLKPELLKGVYAMGYNKPSKIQEAALPIIIQSPNNLIAQSQSGTGKTAAFTLGMLN 131
Query: 609 QVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQ 788
VDP + QA+ + PT+ELALQT ++ ++ + ++I+ ++ + ++ Q
Sbjct: 132 CVDPSINAPQAICISPTKELALQTFEVISKIGQFSNIKPLLYISEIEVPKNVTN-----Q 186
Query: 789 VIIATPGRMIDLMDKQVARMDQCRMLVL 872
VII TPG++++ + K+ + +M+VL
Sbjct: 187 VIIGTPGKILENVIKKQLSVKFLKMVVL 214
>UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4;
Saccharomycetaceae|Rep: ATP-dependent rRNA helicase RRP3
- Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 504
Score = 100 bits (239), Expect = 6e-20
Identities = 52/133 (39%), Positives = 77/133 (57%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F EF L ELL I + +P+PIQ A+IP AL GKD++ A+ G+GKT A+ IP+L+
Sbjct: 100 FTEFDLVPELLESIQSLKYTQPTPIQAAAIPHALQGKDIVGIAETGSGKTAAFAIPILQT 159
Query: 612 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQV 791
+ AL++ PTRELA Q + L +R + GG ++ + + + V
Sbjct: 160 LYTAAQPYYALVLAPTRELAFQIKETFDALGSSMGLRSVCIIGGMSMMEQARDLMRKPHV 219
Query: 792 IIATPGRMIDLMD 830
IIATPGR+ID ++
Sbjct: 220 IIATPGRLIDHLE 232
>UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to vasa-like protein - Nasonia vitripennis
Length = 732
Score = 99 bits (238), Expect = 7e-20
Identities = 54/160 (33%), Positives = 92/160 (57%), Gaps = 11/160 (6%)
Frame = +3
Query: 426 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 605
+ F+E L+ L I + G+ KP+P+Q+ IPI LSG+D++A A+ G+GKT A+ IP++
Sbjct: 302 SSFDEANLRVLLNTNIKKSGYTKPTPVQKYGIPILLSGRDLMACAQTGSGKTAAFLIPII 361
Query: 606 EQVDPKKDTI-----------QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNL 752
+ K + +ALI+ PTREL +Q + +K + ++ + GGT+
Sbjct: 362 HTLLAKDRDLSDMSSANQVEPRALIISPTRELTIQIFDEARKFSKDSVLKCHIIYGGTST 421
Query: 753 RDDIMRIYQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+ +I+Q V +++ATPGR++DL+ K D +VL
Sbjct: 422 SHQMKQIFQGVDILVATPGRLLDLVGKGKITFDAIEFVVL 461
>UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3;
Deltaproteobacteria|Rep: DEAD/DEAH box helicase-like -
Desulfovibrio desulfuricans (strain G20)
Length = 530
Score = 99 bits (238), Expect = 7e-20
Identities = 52/151 (34%), Positives = 85/151 (56%), Gaps = 4/151 (2%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE- 608
F F L L+ + +G+ P+PIQE ++P AL+G+D+L A GTGKT A+ +P+L
Sbjct: 58 FARFSLHPALIEAVSARGFVNPTPIQEKALPPALAGQDILGLAATGTGKTAAFVLPLLHR 117
Query: 609 ---QVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQ 779
Q + + T++AL+V PTREL Q + LA+ +R GG + +++
Sbjct: 118 LLLQGESARGTLRALVVAPTRELVAQIHEEVKTLARFCRLRSATVYGGVGMHAQTVQLRT 177
Query: 780 NVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
V +++A PGR++D + + A + MLVL
Sbjct: 178 GVDIVLACPGRLLDHVRRGHADLSHVDMLVL 208
>UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=11; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 678
Score = 99 bits (238), Expect = 7e-20
Identities = 54/151 (35%), Positives = 88/151 (58%), Gaps = 3/151 (1%)
Frame = +3
Query: 429 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 608
EF E L L + + G+ +PIQ A+IP+AL+G+DVL A+ GTGKT A+ +P+++
Sbjct: 3 EFSELGLSPTTLQAVADTGYTTATPIQAAAIPVALAGQDVLGIAQTGTGKTAAFTLPLID 62
Query: 609 QV---DPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQ 779
++ K +AL++ PTRELA Q + + AK T + + GG + D ++ +
Sbjct: 63 KLMNGRAKARMPRALVIAPTRELADQVASSFEKYAKGTKLSWALLIGGVSFGDQEKKLDR 122
Query: 780 NVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
V V+IATPGR++D ++ M + LV+
Sbjct: 123 GVDVLIATPGRLLDHFERGKLLMTGVQFLVV 153
>UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein;
n=7; Actinomycetales|Rep: DEAD/DEAH box helicase domain
protein - Arthrobacter sp. (strain FB24)
Length = 585
Score = 99 bits (238), Expect = 7e-20
Identities = 52/177 (29%), Positives = 98/177 (55%), Gaps = 10/177 (5%)
Frame = +3
Query: 372 IPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVL 551
I P++ I + F ++ ++ +++ + + G P PIQ ++P+AL+G D++
Sbjct: 19 IEPEETIISDEKPHEIEEKSFADYNVRADIVESLADAGITHPFPIQAMTLPVALAGHDII 78
Query: 552 ARAKNGTGKTGAYCIPVLEQV----DPKKDTI------QALIVVPTRELALQTSQICIEL 701
+AK GTGKT + IP L++V DP D + QAL++VPTRELA+Q ++
Sbjct: 79 GQAKTGTGKTLGFGIPALQRVVGRDDPGFDKLAVPGAPQALVIVPTRELAVQVAKDLENA 138
Query: 702 AKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
A+ + R+ GG + + + V++++ TPGR+IDL ++ + ++++L
Sbjct: 139 ARKRNARIATIYGGRAYEPQVDSLQKGVEIVVGTPGRLIDLYKQKHLSLKNVKIVIL 195
>UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;
Eukaryota|Rep: ATP-dependent RNA helicase DDX39 - Homo
sapiens (Human)
Length = 427
Score = 99 bits (238), Expect = 7e-20
Identities = 59/168 (35%), Positives = 95/168 (56%), Gaps = 2/168 (1%)
Frame = +3
Query: 375 PPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLA 554
PPK + IK S V+ + F +F LK ELL I + G+E PS +Q IP A+ G DVL
Sbjct: 29 PPK-KDIKGSYVS-IHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLC 86
Query: 555 RAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMV 731
+AK+G GKT + + L+Q++P + L++ TRELA Q S+ +K+ ++V V
Sbjct: 87 QAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSV 146
Query: 732 TTGGTNLRDDIMRIYQNV-QVIIATPGRMIDLMDKQVARMDQCRMLVL 872
GG +++ D + +N V++ TPGR++ L+ + + + VL
Sbjct: 147 FFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVRNRSFSLKNVKHFVL 194
>UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 540
Score = 99.5 bits (237), Expect = 1e-19
Identities = 55/135 (40%), Positives = 83/135 (61%), Gaps = 2/135 (1%)
Frame = +3
Query: 429 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 608
+FEE + +LL I E G+ + +PIQE SIP L GKD+ A+ GTGKT A+ IPV+
Sbjct: 2 KFEELSIHPKLLSAIQEIGYTELTPIQEKSIPHGLEGKDITGLAQTGTGKTVAFLIPVIH 61
Query: 609 QVDPKK-DTIQALIVVPTRELALQTSQICIELAKHTD-IRVMVTTGGTNLRDDIMRIYQN 782
+ K I AL++ PTREL +Q ++ +L KH++ IR + GGT+ + +
Sbjct: 62 NILTKGIQGIAALVLAPTRELTMQIAEEAKKLLKHSEGIRSVPIIGGTDYKSQNKDLEGL 121
Query: 783 VQVIIATPGRMIDLM 827
+I+ATPGR+ID++
Sbjct: 122 NGIIVATPGRLIDMI 136
>UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12;
Alphaproteobacteria|Rep: ATP-dependent RNA helicase -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 763
Score = 99.5 bits (237), Expect = 1e-19
Identities = 51/150 (34%), Positives = 89/150 (59%), Gaps = 3/150 (2%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F + L + I E G+ P+PIQ +IP+ L G+DVL A+ GTGKT ++ +P+++
Sbjct: 225 FADLGLSEPVQRAITEMGYLHPTPIQAQAIPVVLMGRDVLGCAQTGTGKTASFTLPMMDI 284
Query: 612 VDPKKDTIQ---ALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQN 782
+ ++ + +LI+ PTRELALQ ++ ++ ++ + + GG ++ D + +
Sbjct: 285 LSDRRARARMPRSLILEPTRELALQVAENFVKYGQYLKLNHALLIGGESMNDQRDVLSKG 344
Query: 783 VQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
V V+IATPGR+IDL D+ + R+LV+
Sbjct: 345 VDVLIATPGRLIDLFDRGGLLLTDTRILVI 374
>UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Marinomonas|Rep: DEAD/DEAH box helicase domain
protein - Marinomonas sp. MWYL1
Length = 417
Score = 99.5 bits (237), Expect = 1e-19
Identities = 54/139 (38%), Positives = 82/139 (58%), Gaps = 4/139 (2%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F E L + I + G+E P+ IQE +IPIAL G D+LA A GTGKT A+C P ++
Sbjct: 19 FAELDLDFTIEQAISDLGFEAPTEIQEQAIPIALDGSDLLATAPTGTGKTIAFCAPAVQH 78
Query: 612 V---DPKKDTI-QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQ 779
+ D + T + LI+ P+RELA Q + +L KHT I+ + GGT ++ +
Sbjct: 79 ILDRDEQSTTAPKVLILAPSRELARQIFNVVEQLTKHTRIQSHLIIGGTPYGMQQQQLSE 138
Query: 780 NVQVIIATPGRMIDLMDKQ 836
+++ATPGR+++L +KQ
Sbjct: 139 PCDILVATPGRLVELDEKQ 157
>UniRef50_Q80Y44 Cluster: Probable ATP-dependent RNA helicase DDX10;
n=14; Eutheria|Rep: Probable ATP-dependent RNA helicase
DDX10 - Mus musculus (Mouse)
Length = 875
Score = 99.5 bits (237), Expect = 1e-19
Identities = 56/152 (36%), Positives = 89/152 (58%), Gaps = 5/152 (3%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F +F L ++ L G+ E + + IQ+ +I +AL GKDVL AK G+GKT A+ +PVLE
Sbjct: 71 FSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEA 130
Query: 612 VD----PKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQ 779
+ D + LI+ PTRELA QT ++ ++ K+ D + GG +L+ + RI
Sbjct: 131 LYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKDLKHEAERI-N 189
Query: 780 NVQVIIATPGRMIDLMDKQVA-RMDQCRMLVL 872
N+ +++ TPGR++ MD+ + +MLVL
Sbjct: 190 NINILVCTPGRLLQHMDETICFHATNLQMLVL 221
>UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific for
23S rRNA; n=1; Lentisphaera araneosa HTCC2155|Rep:
ATP-dependent RNA helicase, specific for 23S rRNA -
Lentisphaera araneosa HTCC2155
Length = 462
Score = 99.1 bits (236), Expect = 1e-19
Identities = 52/149 (34%), Positives = 85/149 (57%), Gaps = 1/149 (0%)
Frame = +3
Query: 429 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 608
+F L +L+ + G+E+ + IQE S+P L GKD++A+AK GTGKT A+ + VL
Sbjct: 5 DFASLPLSEDLIKNVASLGYEEMTEIQELSLPAILDGKDLIAQAKTGTGKTAAFGLGVLS 64
Query: 609 QVDPKKDTIQALIVVPTRELALQTSQICIELAK-HTDIRVMVTTGGTNLRDDIMRIYQNV 785
++ IQ LI+ PTREL Q S+ +LA+ +I+++ GG R + +
Sbjct: 65 KLVLDDYRIQVLILCPTRELCEQVSKAIRDLARMMPNIKLLSLGGGMPFRPQMKSVAHGA 124
Query: 786 QVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+++ TPGR++ ++K +D R LVL
Sbjct: 125 HIVVGTPGRILKHLNKSSLSLDHVRTLVL 153
>UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2;
sulfur-oxidizing symbionts|Rep: ATP-dependent RNA
helicase DeaD - Vesicomyosocius okutanii subsp.
Calyptogena okutanii (strain HA)
Length = 608
Score = 99.1 bits (236), Expect = 1e-19
Identities = 51/150 (34%), Positives = 87/150 (58%), Gaps = 1/150 (0%)
Frame = +3
Query: 426 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 605
++FE L +L + G+E PSPIQE I L+ KD++ +A+ GTGKT A+ +P+L
Sbjct: 12 SKFERLGLSNTILNVLDSIGYETPSPIQEQCITHLLNNKDIIGQAQTGTGKTAAFVLPLL 71
Query: 606 EQVDPKKDTIQALIVVPTRELALQTSQICIELAK-HTDIRVMVTTGGTNLRDDIMRIYQN 782
++++ + Q LI+ PTRELA+Q S+ A+ V+ GG + + + +
Sbjct: 72 DKINLNINAPQLLILAPTRELAIQVSEAVQTYARGMKGFHVLPIYGGQSYDIQLRPLKRG 131
Query: 783 VQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
V I+ TPGR++D ++K+ ++D + VL
Sbjct: 132 VHAIVGTPGRVMDHIEKKTLKLDNLKSFVL 161
>UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=4;
Neisseria|Rep: Putative ATP-dependent RNA helicase -
Neisseria meningitidis serogroup C / serotype 2a (strain
ATCC 700532 /FAM18)
Length = 483
Score = 99.1 bits (236), Expect = 1e-19
Identities = 56/173 (32%), Positives = 93/173 (53%), Gaps = 8/173 (4%)
Frame = +3
Query: 378 PKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLAR 557
P I++ T N F L EL+ + +G+E P+PIQ A+IP AL+G D+LA
Sbjct: 13 PVSDDIRSERKTTIMSNPFSSLGLGTELVSALTAQGYENPTPIQAAAIPKALAGHDLLAA 72
Query: 558 AKNGTGKTGAYCIPVLEQV--------DPKKDTIQALIVVPTRELALQTSQICIELAKHT 713
A+ GTGKT A+ +P LE++ P ++ L++ PTRELA Q Q K+
Sbjct: 73 AQTGTGKTAAFMLPSLERLKRYATASTSPAMHPVRMLVLTPTRELADQIDQNVQSYIKNL 132
Query: 714 DIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+R V GG N+ + ++++AT GR++D + ++ +++ ++VL
Sbjct: 133 PLRHTVLFGGMNMDKQTADLRAGCEIVVATVGRLLDHVKQKNISLNKVEIVVL 185
>UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein;
n=19; Alteromonadales|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 487
Score = 99.1 bits (236), Expect = 1e-19
Identities = 47/136 (34%), Positives = 83/136 (61%), Gaps = 3/136 (2%)
Frame = +3
Query: 429 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 608
+F+ L +L I E G+ + + +Q+ IP+AL GKD++A A+ GTGKT ++ +PVLE
Sbjct: 23 KFDTLGLSSPILNAIAECGYLQLTQVQQQVIPLALEGKDIMACAQTGTGKTASFALPVLE 82
Query: 609 QVDPK---KDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQ 779
Q+ + K ++AL++ PTRELA+Q + ++ ++ + GG N+ + Q
Sbjct: 83 QLSKQPNDKPLLRALVMTPTRELAIQVCANIQKYSQFLPLKTLAVYGGANMNPQRKGVEQ 142
Query: 780 NVQVIIATPGRMIDLM 827
V +++ATPGR+ D++
Sbjct: 143 GVDILVATPGRLFDII 158
>UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=1; Filobasidiella neoformans|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 738
Score = 99.1 bits (236), Expect = 1e-19
Identities = 69/220 (31%), Positives = 111/220 (50%), Gaps = 18/220 (8%)
Frame = +3
Query: 267 ENRISSSNHVGNSISQTKGEVDKSIDDVGWKSKL--KIPPKDRRIKTSDVT-DTRGN--- 428
+N S NH + + + + K DD W K ++ +D RI D + RG
Sbjct: 254 KNETRSDNHA-DPLERRRAVKGKD-DDRHWSDKPLDEMKERDWRIFREDFSIAARGGGIP 311
Query: 429 ----EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCI 596
+ E + ++L I E G+++PSPIQ +IPI + +D++ AK G+GKT A+ I
Sbjct: 312 HPLRNWRESAIPSQILDIIEEIGYKEPSPIQRQAIPIGMQNRDLIGVAKTGSGKTAAFVI 371
Query: 597 PVLEQVD---PKKDTIQ-----ALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNL 752
P+L+ + P D + ALI+ PTRELA Q A + + GG ++
Sbjct: 372 PMLDYIGHLPPLNDDNRHLGPYALIMAPTRELAQQIETETRRFALPLGYKCVSIVGGRSV 431
Query: 753 RDDIMRIYQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+ + ++IIATPGR+ D++DK + M QCR +V+
Sbjct: 432 EEQQFALRDGAEIIIATPGRLKDMVDKSILVMSQCRYVVM 471
>UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4;
Wolbachia|Rep: Superfamily II DNA/RNA helicase -
Wolbachia sp. subsp. Brugia malayi (strain TRS)
Length = 408
Score = 98.7 bits (235), Expect = 2e-19
Identities = 51/150 (34%), Positives = 91/150 (60%), Gaps = 1/150 (0%)
Frame = +3
Query: 426 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 605
N F E L L + + + P+P+Q +IP+AL GKD+L A+ GTGKT A+ IP++
Sbjct: 2 NSFYEMGLPLLLAQALDKNSFSVPTPVQAQAIPLALKGKDILGSAQTGTGKTLAFAIPLI 61
Query: 606 EQVDPKKDTIQALIVVPTRELALQ-TSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQN 782
++ + + AL++VPTRELA Q T++I L K++ +++ + GG + + ++ +
Sbjct: 62 AKLLGEPNASTALVIVPTRELAQQVTNEIGKLLLKNSVLKIALLIGGEPIFRQLNQLQRR 121
Query: 783 VQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+++I TPGR+ID ++++ + LVL
Sbjct: 122 PRIVIGTPGRIIDHIERKTLITNNVSTLVL 151
>UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep: DEAD/DEAH
box helicase-like - Thiomicrospira denitrificans (strain
ATCC 33889 / DSM 1351)
Length = 432
Score = 98.7 bits (235), Expect = 2e-19
Identities = 50/138 (36%), Positives = 85/138 (61%), Gaps = 4/138 (2%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
FE+ + + LL I + G+EKP+ IQ +IP+ L+ DV A A+ GTGKT A+ + +L++
Sbjct: 3 FEKLGVIKPLLSAIKDLGYEKPTTIQTRAIPLILAKSDVFATAQTGTGKTAAFGLGMLQR 62
Query: 612 V----DPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQ 779
+ D K+ ++ L++ PTREL++Q + AK+ I + V GG +L + +
Sbjct: 63 LRKTSDDKQRALRGLVIAPTRELSIQIYEDLQSYAKNMGINIAVLVGGKDLESQQKILKE 122
Query: 780 NVQVIIATPGRMIDLMDK 833
V ++IATPGR+++ +DK
Sbjct: 123 GVDIVIATPGRVLEHVDK 140
>UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal; n=1;
Exiguobacterium sibiricum 255-15|Rep: IMP
dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal -
Exiguobacterium sibiricum 255-15
Length = 450
Score = 98.7 bits (235), Expect = 2e-19
Identities = 51/142 (35%), Positives = 86/142 (60%), Gaps = 2/142 (1%)
Frame = +3
Query: 426 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 605
N F F L ++ + + +KP+ IQ IP AL G+D++ +++ GTGKT ++ +P++
Sbjct: 2 NGFSHFDLHPFVVEALEDARIKKPTDIQSRIIPAALKGRDIIGQSQTGTGKTLSFLLPIV 61
Query: 606 EQVDPKKDTIQALIVVPTRELALQT-SQICIELAKHTD-IRVMVTTGGTNLRDDIMRIYQ 779
+ V+P+ +QA+IV PTRELA Q ++ L K D I+ + TGG + I R+
Sbjct: 62 QNVNPELQEMQAIIVAPTRELAWQIHEELKSILVKQPDYIKTSLITGGMDRERQIGRVKV 121
Query: 780 NVQVIIATPGRMIDLMDKQVAR 845
+ Q++I TPGR++DL +Q +
Sbjct: 122 SPQIVIGTPGRILDLFKEQALK 143
>UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Kineococcus radiotolerans SRS30216|Rep: DEAD/DEAH
box helicase domain protein - Kineococcus radiotolerans
SRS30216
Length = 590
Score = 98.7 bits (235), Expect = 2e-19
Identities = 50/168 (29%), Positives = 92/168 (54%), Gaps = 5/168 (2%)
Frame = +3
Query: 384 DRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 563
++ + ++ + + F E L EL+ + +G P IQ ++P ++G+D+L RA+
Sbjct: 132 EQALTAAEQIEVAESTFAELGLPEELVAALERRGMTAPFAIQSRTLPDGIAGRDILGRAR 191
Query: 564 NGTGKTGAYCIPVLEQVDPKK-----DTIQALIVVPTRELALQTSQICIELAKHTDIRVM 728
G+GKT + +P+L ++ +K + L++VPTRELA+Q + L D+R+
Sbjct: 192 TGSGKTLGFGLPMLARLAQQKRPRITGAPRGLVLVPTRELAMQVADALRPLGDSLDLRLS 251
Query: 729 VTTGGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
V GG I + + + V+IATPGR++DL+D+ + + + VL
Sbjct: 252 VVVGGVPYGRQIAALQRGIDVLIATPGRLVDLIDRDAVSLAEVDVAVL 299
>UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinekea
sp. MED297|Rep: ATP-dependent RNA helicase - Reinekea
sp. MED297
Length = 534
Score = 98.7 bits (235), Expect = 2e-19
Identities = 53/154 (34%), Positives = 88/154 (57%), Gaps = 7/154 (4%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F + L L+ I E G+E SPIQ ++P AL+G D + +A+ GTGKT A+ I +
Sbjct: 29 FHDLFLPIALMRAIQEVGYEYCSPIQAMTLPYALAGHDCIGKAQTGTGKTAAFLITAITD 88
Query: 612 V------DPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 773
+ + +ALI+ PTRELALQ ++ L K++ ++V GG + ++
Sbjct: 89 LLEHRLEEQYVGEPRALILAPTRELALQIAEDAKALTKYSRLKVAAVVGGMDFDKQKQQL 148
Query: 774 Y-QNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+ Q +++ATPGR+ID M+++ +DQ ML++
Sbjct: 149 HEQRTDILVATPGRLIDFMNRKAVFLDQIEMLII 182
>UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqfR;
n=12; Bacillaceae|Rep: Probable ATP-dependent RNA
helicase yqfR - Bacillus subtilis
Length = 438
Score = 98.7 bits (235), Expect = 2e-19
Identities = 50/151 (33%), Positives = 88/151 (58%), Gaps = 3/151 (1%)
Frame = +3
Query: 429 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 608
+FE + LK ++ + G+ +P+ IQ+ IP L + V+ +++ GTGKT AY +P+L
Sbjct: 5 KFELYELKPFIIDAVHRLGFYEPTDIQKRLIPAVLKKESVIGQSQTGTGKTHAYLLPLLN 64
Query: 609 QVDPKKDTIQALIVVPTRELALQTSQICIELA---KHTDIRVMVTTGGTNLRDDIMRIYQ 779
++DP KD +Q +I PTRELA Q Q +++ + + IR GGT+ + I ++
Sbjct: 65 KIDPAKDVVQVVITAPTRELANQIYQEALKITQGEEGSQIRSKCFIGGTDKQKSIDKLKI 124
Query: 780 NVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+++ TPGR+ DL+ +Q + + LV+
Sbjct: 125 QPHLVVGTPGRIADLIKEQALSVHKAESLVI 155
>UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=23;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - Bradyrhizobium japonicum
Length = 530
Score = 98.3 bits (234), Expect = 2e-19
Identities = 48/152 (31%), Positives = 85/152 (55%), Gaps = 5/152 (3%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL-- 605
F++F L + + E+ + P+PIQ +IP AL+G+DV+ A+ GTGKT ++ +P+L
Sbjct: 18 FQDFGLAEPIARALSEENYVTPTPIQAQTIPTALTGRDVVGIAQTGTGKTASFALPILHR 77
Query: 606 ---EQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIY 776
++ P+ T + L++ PTREL+ Q +H + + GG + + +
Sbjct: 78 LLEHRIKPQPKTTRVLVLSPTRELSGQILDSFNAYGRHIRLSSTLAIGGVPMGRQVRSLM 137
Query: 777 QNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
Q V+V++ATPGR++DL+ ++ LVL
Sbjct: 138 QGVEVLVATPGRLLDLVQSNGLKLGSVEFLVL 169
>UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;
n=1; Cytophaga hutchinsonii ATCC 33406|Rep: Inducible
ATP-independent RNA helicase - Cytophaga hutchinsonii
(strain ATCC 33406 / NCIMB 9469)
Length = 457
Score = 98.3 bits (234), Expect = 2e-19
Identities = 49/149 (32%), Positives = 84/149 (56%), Gaps = 2/149 (1%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIAL-SGKDVLARAKNGTGKTGAYCIPVLE 608
F + L LL + E PS IQ+ +IP+ L S K+V+ A+ GTGKT A+ +PVL+
Sbjct: 3 FSDLGLNAALLQSLSENNISSPSEIQQKAIPVILNSTKNVVGVAQTGTGKTAAFGLPVLQ 62
Query: 609 QVDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGGTNLRDDIMRIYQNV 785
Q++P Q L++VPTREL Q ++ +++ I GG + + I ++
Sbjct: 63 QINPSLQQTQVLVLVPTRELGQQVAKDLFVFSRYIVRIHTEAVYGGKKIEEQIKKLETPK 122
Query: 786 QVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+++ATPGR++DL+ ++ + + L+L
Sbjct: 123 HILVATPGRLLDLIARKAVNLSNLKYLIL 151
>UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 730
Score = 98.3 bits (234), Expect = 2e-19
Identities = 68/233 (29%), Positives = 118/233 (50%), Gaps = 22/233 (9%)
Frame = +3
Query: 240 RDKFGKMMTENRIS---SSNHVGNSISQTKGEVDKSIDDVGWKSK--LKIPPKDRRIKTS 404
++ F + M ENR + + + K E + DD W+ K ++ +D RI
Sbjct: 226 KNSFYQEMMENRRTVDEKEQEMHRLEKELKKEKKVAHDDRHWRMKELSEMSDRDWRIFRE 285
Query: 405 DVT-DTRGNE-------FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARA 560
D +G +EE E+ + E G+ +P+PIQ +IPI L +DV+ A
Sbjct: 286 DFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVIGVA 345
Query: 561 KNGTGKTGAYCIPVLEQVD--PKKDTIQ-------ALIVVPTRELALQTSQICIELAKHT 713
+ G+GKT A+ +P+L + PK + + A+I+ PTRELA Q + + K
Sbjct: 346 ETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFGKLL 405
Query: 714 DIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
I+ + GG + D M++ V+V+IATPGR++D+++ + ++QC ++L
Sbjct: 406 GIKTVSVIGGASREDQGMKLRMGVEVVIATPGRLLDVLENRYLLLNQCTYVIL 458
>UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=4;
Eukaryota|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 699
Score = 98.3 bits (234), Expect = 2e-19
Identities = 60/182 (32%), Positives = 96/182 (52%), Gaps = 5/182 (2%)
Frame = +3
Query: 342 DDVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASI 521
D G+ +KL+I K R I + EFE+ L +L ++G+ KP+ IQ +
Sbjct: 100 DVKGYLAKLEITLKGRNIPRPSM------EFEQGGLPDYILEEANKQGFSKPTAIQAQGM 153
Query: 522 PIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKK-----DTIQALIVVPTRELALQTSQ 686
PIALSG+D++ A+ G+GKT AY P L + + D AL++ PTRELA Q Q
Sbjct: 154 PIALSGRDMVGIAQTGSGKTLAYIAPALVHITHQDQLRRGDGPIALVLAPTRELAQQIQQ 213
Query: 687 ICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVARMDQCRML 866
+ + + + GG I + + +++IATPGR+ID +++ + + +C L
Sbjct: 214 VATDFGQRINANNTCVFGGAPKGPQIRDLERGAEIVIATPGRLIDFLERGITNLRRCTYL 273
Query: 867 VL 872
VL
Sbjct: 274 VL 275
>UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Rep:
DEAD-box helicase 2 - Plasmodium falciparum
Length = 562
Score = 98.3 bits (234), Expect = 2e-19
Identities = 53/186 (28%), Positives = 101/186 (54%)
Frame = +3
Query: 264 TENRISSSNHVGNSISQTKGEVDKSIDDVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEEF 443
++ I ++NH ++I+ G +K+ D+ + + + + T++ + + FE+
Sbjct: 104 SDYNIINNNH--DNINFIHGNKNKNHDNSFHNNDDVKNGEVKNLVTNEEREKQNVTFEDL 161
Query: 444 CLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPK 623
+ E+L I E GW+KP+ IQ +P A KD++ ++ G+GKT + IP+L+ +
Sbjct: 162 NICEEILESIKELGWKKPTEIQREILPHAFLKKDIIGLSETGSGKTACFIIPILQDLKVN 221
Query: 624 KDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIAT 803
K + AL++ PTREL +Q SQ L + I + GG ++ + + + VI++T
Sbjct: 222 KQSFYALVISPTRELCIQISQNFQALGMNLLINICTIYGGVDIVTQSLNLAKKPNVIVST 281
Query: 804 PGRMID 821
PGR++D
Sbjct: 282 PGRILD 287
>UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5;
Eukaryota|Rep: ATP-dependent RNA helicase vasa -
Drosophila melanogaster (Fruit fly)
Length = 661
Score = 98.3 bits (234), Expect = 2e-19
Identities = 51/147 (34%), Positives = 90/147 (61%), Gaps = 5/147 (3%)
Frame = +3
Query: 447 LKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV--DP 620
L+ ++ + + G++ P+PIQ+ SIP+ SG+D++A A+ G+GKT A+ +P+L ++ DP
Sbjct: 252 LRDIIIDNVNKSGYKIPTPIQKCSIPVISSGRDLMACAQTGSGKTAAFLLPILSKLLEDP 311
Query: 621 KKDTI---QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQV 791
+ + Q +IV PTRELA+Q + A + +++ + GGT+ R I + V
Sbjct: 312 HELELGRPQVVIVSPTRELAIQIFNEARKFAFESYLKIGIVYGGTSFRHQNECITRGCHV 371
Query: 792 IIATPGRMIDLMDKQVARMDQCRMLVL 872
+IATPGR++D +D+ + R +VL
Sbjct: 372 VIATPGRLLDFVDRTFITFEDTRFVVL 398
>UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6;
Ascomycota|Rep: ATP-dependent rRNA helicase RRP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 501
Score = 98.3 bits (234), Expect = 2e-19
Identities = 55/172 (31%), Positives = 83/172 (48%), Gaps = 3/172 (1%)
Frame = +3
Query: 324 EVDKSIDDVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEEFC---LKRELLMGIFEKGWEK 494
E D D K K+ + T + FE F L EL+ + K
Sbjct: 44 ESDSEEDATAEKKKVLKSKSKSTVSTQNENTNEDESFESFSELNLVPELIQACKNLNYSK 103
Query: 495 PSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELAL 674
P+PIQ +IP AL G D++ A+ G+GKT A+ IP+L ++ ++ A I+ PTRELA
Sbjct: 104 PTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNRLWHDQEPYYACILAPTRELAQ 163
Query: 675 QTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMIDLMD 830
Q + L +R GG N+ D + + +IIATPGR++D ++
Sbjct: 164 QIKETFDSLGSLMGVRSTCIVGGMNMMDQARDLMRKPHIIIATPGRLMDHLE 215
>UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Filobasidiella neoformans|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 1072
Score = 98.3 bits (234), Expect = 2e-19
Identities = 54/145 (37%), Positives = 82/145 (56%), Gaps = 5/145 (3%)
Frame = +3
Query: 441 FCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDP 620
F L + L I +GWE P+ IQ +IP +SG+DV+ AK G+GKT A+ +P+L V
Sbjct: 408 FGLPQGCLDVIKHQGWETPTSIQAQAIPAIMSGRDVIGIAKTGSGKTVAFLLPMLRHVRD 467
Query: 621 KKDTIQ-----ALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNV 785
++ A+++ PTRELA Q + C K +IR GG+++ +DI + +
Sbjct: 468 QRPVSGSEGPIAVVMSPTRELASQIYKECQPFLKVLNIRASCCVGGSSISEDIAAMKKGA 527
Query: 786 QVIIATPGRMIDLMDKQVARMDQCR 860
+V+I TPGRMIDL+ R+ R
Sbjct: 528 EVVICTPGRMIDLLTANNGRVTNVR 552
>UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23;
Dikarya|Rep: ATP-dependent RNA helicase DBP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 482
Score = 98.3 bits (234), Expect = 2e-19
Identities = 54/150 (36%), Positives = 95/150 (63%), Gaps = 3/150 (2%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSG--KDVLARAKNGTGKTGAYCIPVL 605
F+E L ELL GI+ ++KPS IQE ++P+ L ++++A++++GTGKT A+ + +L
Sbjct: 94 FDELGLAPELLKGIYAMKFQKPSKIQERALPLLLHNPPRNMIAQSQSGTGKTAAFSLTML 153
Query: 606 EQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQ-N 782
+V+P+ + QA+ + P+RELA QT ++ E+ K T I T + D + Q N
Sbjct: 154 TRVNPEDASPQAICLAPSRELARQTLEVVQEMGKFTKI-----TSQLIVPDSFEKNKQIN 208
Query: 783 VQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
QVI+ TPG ++DLM +++ ++ + ++ VL
Sbjct: 209 AQVIVGTPGTVLDLMRRKLMQLQKIKIFVL 238
>UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 476
Score = 97.9 bits (233), Expect = 3e-19
Identities = 51/135 (37%), Positives = 75/135 (55%), Gaps = 1/135 (0%)
Frame = +3
Query: 426 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 605
+ F +F LK++LL + E G+E+PS +Q IP A+ GKDVL +AK GTGKT + + VL
Sbjct: 38 SSFNDFSLKQDLLRSVKEAGFERPSEVQHQCIPNAIHGKDVLCQAKAGTGKTAVFVLSVL 97
Query: 606 EQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI-YQN 782
Q+ L++ TRELA Q L K T+ +V GG DI + +
Sbjct: 98 NQLPDDAKPFSCLVLCHTRELAFQIKNEFKRLGKFTNFKVKAVYGGVEESVDIHTLKTKK 157
Query: 783 VQVIIATPGRMIDLM 827
+++ATPGR + L+
Sbjct: 158 PHILVATPGRCLSLI 172
>UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia
franciscana|Rep: VASA RNA helicase - Artemia
sanfranciscana (Brine shrimp) (Artemia franciscana)
Length = 726
Score = 97.9 bits (233), Expect = 3e-19
Identities = 49/158 (31%), Positives = 93/158 (58%), Gaps = 9/158 (5%)
Frame = +3
Query: 426 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 605
+ F+ L+ ++L I + G+ +P+P+Q+ +IP+ + +D++A A+ G+GKTGAY IP++
Sbjct: 304 DSFDAAGLRPKILDNIKKSGYTQPTPVQKWAIPVIMKKRDLMACAQTGSGKTGAYLIPII 363
Query: 606 EQVDPK---------KDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRD 758
++ + T +A+++ PTRELA+Q + ++ + T I+ +V GG R
Sbjct: 364 NRLIEEGCAASSYDETQTPEAVVMCPTRELAIQIFKEAVKFSYDTIIKPVVVYGGVAPRY 423
Query: 759 DIMRIYQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
++ +++ TPGR+ID M++ V C+ LVL
Sbjct: 424 QSDKVKSGCNILVGTPGRLIDFMNRGVFNFSACKFLVL 461
>UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 389
Score = 97.9 bits (233), Expect = 3e-19
Identities = 52/147 (35%), Positives = 86/147 (58%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
+E LK EL+ I + GWEKPSPIQ+ +I I GK+++ +++NG+GKT + I L +
Sbjct: 22 WESMKLKPELIEAIKKNGWEKPSPIQQRAIYIISQGKNIMFQSQNGSGKTATFSIGTLAR 81
Query: 612 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQV 791
+ T + +IV PTRELA+QT L +T R V GG +L D+ + + +
Sbjct: 82 LRLTSKTTELIIVSPTRELAIQTENTLKSLGANT--RACV--GGNSLGADVKALQKGIHC 137
Query: 792 IIATPGRMIDLMDKQVARMDQCRMLVL 872
+ TPGR++ L+ + + ++ + +VL
Sbjct: 138 VSGTPGRILQLLKEHNIQAEKVQSVVL 164
>UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella frigidimarina (strain NCIMB
400)
Length = 421
Score = 97.5 bits (232), Expect = 4e-19
Identities = 54/160 (33%), Positives = 90/160 (56%), Gaps = 14/160 (8%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F + L L+ + E +++P+PIQ +IP+ LSGKDV+A A+ GTGKT A+ +P+L Q
Sbjct: 3 FADLSLHPILINRLAELKYQQPTPIQLQAIPVILSGKDVMAGAQTGTGKTAAFALPLLHQ 62
Query: 612 VDPKKDT--------------IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTN 749
+ +D I AL++VPTRELA Q + A + + ++ GG +
Sbjct: 63 LLTHQDNLAAQPDTQHINSTPITALVLVPTRELAQQVHSSIEQYAYGSSVTSVMVYGGVS 122
Query: 750 LRDDIMRIYQNVQVIIATPGRMIDLMDKQVARMDQCRMLV 869
+ + I ++ +++ATPGR++DL+ K+ + Q LV
Sbjct: 123 IGEQIRQLANGTHILVATPGRLLDLLRKRALSLSQLTHLV 162
>UniRef50_A4SWL3 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Polynucleobacter sp. QLW-P1DMWA-1
Length = 500
Score = 97.5 bits (232), Expect = 4e-19
Identities = 55/174 (31%), Positives = 95/174 (54%), Gaps = 10/174 (5%)
Frame = +3
Query: 381 KDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARA 560
K+ +I++ D T G EF+ F L LL + E G+ + + +Q IP AL+G D+L +
Sbjct: 5 KETKIESKDSKST-GTEFQNFALAASLLKNVAELGFTQATSVQAQVIPAALAGGDLLVSS 63
Query: 561 KNGTGKTGAYCIPVLEQV---DPKKDTI------QALIVVPTRELALQTSQICIELAKHT 713
+ G+GKT A+ +P++ Q+ +P + + L++ PTRELA Q + + L +
Sbjct: 64 QTGSGKTAAFLLPLINQLIEDNPNNSPVPGRAQPKVLVLCPTRELAQQVAADAVNLVRGM 123
Query: 714 D-IRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
IR+ GG I + + +++ATPGR++DL D + R+D + LV+
Sbjct: 124 KGIRIATVMGGMPYGKQIQAL-KGALLVVATPGRLLDLCDSKAIRLDDVKQLVI 176
>UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=2;
Polaribacter|Rep: Putative ATP-dependent RNA helicase -
Polaribacter dokdonensis MED152
Length = 411
Score = 97.5 bits (232), Expect = 4e-19
Identities = 50/154 (32%), Positives = 88/154 (57%), Gaps = 6/154 (3%)
Frame = +3
Query: 429 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 608
+F + L + + I E + KP+ +QE +IP+ L K+V+ A+ GTGKT A+ +P++
Sbjct: 2 QFSDIPLNKSIQKAIAEARFHKPTLVQEKTIPLVLDKKNVIVAAQTGTGKTAAFALPIIN 61
Query: 609 QVDPKKDT------IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMR 770
+ K+D I+AL++ PTRELA+Q + +K++++R GG +L
Sbjct: 62 LLFDKQDAEKGEKKIKALVITPTRELAIQILENFKSYSKYSNLRSTAVFGGVSLEPQKEI 121
Query: 771 IYQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+ + V +++ATPGR+IDL + + Q + VL
Sbjct: 122 LAKGVDILVATPGRLIDLQMQGNIDLSQLEIFVL 155
>UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA
helicase-like protein; n=1; Oikopleura dioica|Rep:
ATP-dependent 61 kDa nucleolar RNA helicase-like protein
- Oikopleura dioica (Tunicate)
Length = 548
Score = 97.5 bits (232), Expect = 4e-19
Identities = 55/150 (36%), Positives = 88/150 (58%), Gaps = 2/150 (1%)
Frame = +3
Query: 429 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 608
++ F L +L GI GW++P+ IQEA +PIAL GKD+LA+A+ G+GKTGAY IP+++
Sbjct: 12 QWNSFGLDPRILSGIAALGWKEPTEIQEAGLPIALKGKDILAKARTGSGKTGAYLIPIVQ 71
Query: 609 QVDPKKDTIQALIVVPTRELALQTSQICIEL-AKHTDIRVMVTTGG-TNLRDDIMRIYQN 782
++ T +ALI+ PTREL Q + EL K D+ + G DI +
Sbjct: 72 RILHIAST-RALIIGPTRELCSQIEAVVRELCVKCLDVVSIYELGSEVETEADI-----S 125
Query: 783 VQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
++I TPGR+++ + + + + ++VL
Sbjct: 126 ASIVIGTPGRILNALKSERLSLTELSVMVL 155
>UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=3; Trypanosoma|Rep: ATP-dependent DEAD/H RNA
helicase, putative - Trypanosoma brucei
Length = 660
Score = 97.5 bits (232), Expect = 4e-19
Identities = 52/158 (32%), Positives = 87/158 (55%), Gaps = 11/158 (6%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F E + LL + G+ KP+P+Q IP AL+ +D++A A+ G+GKT +Y IP + +
Sbjct: 159 FSEMNMVPVLLENVKRCGYTKPTPVQSLGIPTALNHRDLMACAQTGSGKTASYLIPAINE 218
Query: 612 V----------DP-KKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRD 758
+ P + QALI+ PTREL+LQ + HT +R +V GG + R
Sbjct: 219 ILLNISNRPPYSPGSHSSPQALILAPTRELSLQIYGEARKFTYHTPVRCVVVYGGADPRH 278
Query: 759 DIMRIYQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+ + + ++++ATPGR++D+ + R + R L+L
Sbjct: 279 QVHELSRGCKLLVATPGRLMDMFSRGYVRFSEIRFLIL 316
>UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_99,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 706
Score = 97.5 bits (232), Expect = 4e-19
Identities = 49/148 (33%), Positives = 85/148 (57%), Gaps = 2/148 (1%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
FE L EL I +G+ P+PIQ +IP L+G+D++A +K G+GKT A+ IP++ +
Sbjct: 12 FESMGLIPELYRAIKSQGFNVPTPIQRKAIPQILAGRDIVACSKTGSGKTAAFLIPLINK 71
Query: 612 VDPKKDT--IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNV 785
+ I+ LI++PTRELALQ + + L K +DI+ + GG + N
Sbjct: 72 LQNHSTVVGIRGLILLPTRELALQIASVLKALLKFSDIQYSIMVGGHGFEGQFESLASNP 131
Query: 786 QVIIATPGRMIDLMDKQVARMDQCRMLV 869
++I TPGR++ + + ++ + +M++
Sbjct: 132 DILICTPGRVLQHLLEDRLKLSRVQMVI 159
>UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10;
Rickettsia|Rep: ATP-dependent RNA helicase RhlE -
Rickettsia conorii
Length = 414
Score = 97.1 bits (231), Expect = 5e-19
Identities = 52/146 (35%), Positives = 87/146 (59%)
Frame = +3
Query: 435 EEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV 614
+ F L EL++ + +P+ IQ+ SIP+A++G D+LA ++ G+GKT AY +P+++
Sbjct: 6 KNFNLSEELIIALETMNITEPTEIQKQSIPVAMAGSDILASSQTGSGKTLAYLLPLIDSF 65
Query: 615 DPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVI 794
K T ALI+VPTRELA Q ++ I V GG + +++ +N +VI
Sbjct: 66 IKNKTT--ALILVPTRELATQIHSTLNKVTTSYKINSAVLIGGEPMPKQFIQLKKNPKVI 123
Query: 795 IATPGRMIDLMDKQVARMDQCRMLVL 872
I TPGR+ID +++ ++D+ + VL
Sbjct: 124 IGTPGRIIDHLNRGSLKIDRIGITVL 149
>UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like -
Pseudomonas putida W619
Length = 621
Score = 97.1 bits (231), Expect = 5e-19
Identities = 51/150 (34%), Positives = 92/150 (61%), Gaps = 3/150 (2%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F +F L LL + E + +P+P+Q A+IP+AL G+D+ A+ G+GKT A+ +P+L +
Sbjct: 184 FSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPLLNR 243
Query: 612 -VDPK--KDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQN 782
VD K + I+ALI++PTRELA QT + ++ T I+ + TGG + ++ + +
Sbjct: 244 LVDLKGARVEIRALILLPTRELAQQTLKQVQLFSQFTYIKAGLVTGGEDFKEQAAMLRKV 303
Query: 783 VQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
V+I TPGR+++ ++ + ++++L
Sbjct: 304 PDVLIGTPGRLLEQLNAGNLDLSHVQVMIL 333
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 771,433,513
Number of Sequences: 1657284
Number of extensions: 14454080
Number of successful extensions: 40375
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 37140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39222
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79522270534
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -