Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_P05
(886 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 276 1e-74
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 125 4e-29
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 125 4e-29
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 122 3e-28
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 122 5e-28
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 110 1e-24
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 110 1e-24
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 108 5e-24
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 105 6e-23
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 98 6e-21
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 95 6e-20
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 95 6e-20
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 95 6e-20
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 93 2e-19
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 91 1e-18
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 91 1e-18
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 90 2e-18
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 90 2e-18
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 89 4e-18
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 89 4e-18
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 89 5e-18
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 89 5e-18
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 89 5e-18
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 89 5e-18
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 89 5e-18
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 81 8e-16
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 81 1e-15
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 79 4e-15
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 76 3e-14
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 76 3e-14
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 75 5e-14
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 71 8e-13
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 71 8e-13
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 71 8e-13
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 71 1e-12
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 71 1e-12
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 71 1e-12
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 69 3e-12
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 68 1e-11
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 66 3e-11
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 66 3e-11
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 65 6e-11
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 65 6e-11
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 65 6e-11
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 65 6e-11
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 65 7e-11
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 63 2e-10
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 60 2e-09
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 53 3e-07
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 49 4e-06
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 34 0.12
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 34 0.12
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 33 0.36
U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical p... 29 4.4
U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical p... 29 4.4
Z70757-5|CAA94801.1| 110|Caenorhabditis elegans Hypothetical pr... 28 7.7
AB077287-1|BAB83695.1| 101|Caenorhabditis elegans RING-H2 finge... 28 7.7
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 276 bits (677), Expect = 1e-74
Identities = 123/176 (69%), Positives = 153/176 (86%)
Frame = +3
Query: 345 DVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIP 524
D WK+ L +P KDRR KT+DVTDT+G EFE+FCL R+LLMGIFEKGWEKPSPIQEASI
Sbjct: 16 DENWKAGLNLPAKDRRFKTADVTDTKGVEFEDFCLGRDLLMGIFEKGWEKPSPIQEASIG 75
Query: 525 IALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELA 704
+AL+G+D+LARAKNGTGKTGAYCIPV+E++ P IQA+++VPTRELALQTSQIC+EL+
Sbjct: 76 VALTGQDILARAKNGTGKTGAYCIPVIEKIQPALKAIQAMVIVPTRELALQTSQICVELS 135
Query: 705 KHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
KH ++VMVTTGGT+LRDDIMR+ V ++IATPGR++DLM+K VA+M+ C+ LVL
Sbjct: 136 KHIQLKVMVTTGGTDLRDDIMRLNGTVHLVIATPGRILDLMEKGVAKMEHCKTLVL 191
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 125 bits (302), Expect = 4e-29
Identities = 55/147 (37%), Positives = 98/147 (66%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F++ LK ELL GI+ G+EKPS IQ+ +I +GKDV+A+A++GTGKT + + +L++
Sbjct: 31 FDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQR 90
Query: 612 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQV 791
+D + +QAL++ PTRELA Q ++ L ++ ++ ++ GGT++RDD ++ + V
Sbjct: 91 IDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQRKLEAGIHV 150
Query: 792 IIATPGRMIDLMDKQVARMDQCRMLVL 872
++ TPGR+ D++++ + +M VL
Sbjct: 151 VVGTPGRVGDMINRNALDTSRIKMFVL 177
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 125 bits (302), Expect = 4e-29
Identities = 55/147 (37%), Positives = 98/147 (66%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F++ LK ELL GI+ G+EKPS IQ+ +I +GKDV+A+A++GTGKT + + +L++
Sbjct: 31 FDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQR 90
Query: 612 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQV 791
+D + +QAL++ PTRELA Q ++ L ++ ++ ++ GGT++RDD ++ + V
Sbjct: 91 IDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQRKLEAGIHV 150
Query: 792 IIATPGRMIDLMDKQVARMDQCRMLVL 872
++ TPGR+ D++++ + +M VL
Sbjct: 151 VVGTPGRVGDMINRNALDTSRIKMFVL 177
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 122 bits (294), Expect = 3e-28
Identities = 58/147 (39%), Positives = 95/147 (64%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F++ L+ +LL GI+ G+EKPS IQ+ +IP L +DV+A+A++GTGKT + I VL+
Sbjct: 28 FDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISVLQS 87
Query: 612 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQV 791
+D + QALI+ PTRELA+Q ++ + L + +++ GGTNL +DI ++ V
Sbjct: 88 LDTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRKLDYGQHV 147
Query: 792 IIATPGRMIDLMDKQVARMDQCRMLVL 872
+ TPGR+ D++ ++ R ++LVL
Sbjct: 148 VSGTPGRVFDMIRRRNLRTRAIKLLVL 174
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 122 bits (293), Expect = 5e-28
Identities = 57/147 (38%), Positives = 95/147 (64%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F++ L+ +LL GI+ G+EKPS IQ+ ++P L +DV+A+A++GTGKT + I VL+
Sbjct: 28 FDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSISVLQS 87
Query: 612 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQV 791
+D + QALI+ PTRELA+Q ++ + L + +++ GGTNL +DI ++ V
Sbjct: 88 LDTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRKLDYGQHV 147
Query: 792 IIATPGRMIDLMDKQVARMDQCRMLVL 872
+ TPGR+ D++ ++ R ++LVL
Sbjct: 148 VSGTPGRVFDMIRRRNLRTRAIKLLVL 174
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 110 bits (265), Expect = 1e-24
Identities = 52/147 (35%), Positives = 93/147 (63%), Gaps = 1/147 (0%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
+++ L + I +KG+ +P+PIQ +IP + GKDV+A ++ G+GKT A+ IP+L++
Sbjct: 26 WQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQK 85
Query: 612 VDPKKDT-IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQ 788
+ + T I+AL+V PTRELALQT ++ EL + T +R GG + + I++N
Sbjct: 86 LKRRDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEEQFSTIHENPD 145
Query: 789 VIIATPGRMIDLMDKQVARMDQCRMLV 869
+++ATPGR++ ++ + R+ + +V
Sbjct: 146 ILLATPGRLLHVIVEMDLRLSYVQYVV 172
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 110 bits (265), Expect = 1e-24
Identities = 52/147 (35%), Positives = 93/147 (63%), Gaps = 1/147 (0%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
+++ L + I +KG+ +P+PIQ +IP + GKDV+A ++ G+GKT A+ IP+L++
Sbjct: 26 WQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQK 85
Query: 612 VDPKKDT-IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQ 788
+ + T I+AL+V PTRELALQT ++ EL + T +R GG + + I++N
Sbjct: 86 LKRRDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEEQFSTIHENPD 145
Query: 789 VIIATPGRMIDLMDKQVARMDQCRMLV 869
+++ATPGR++ ++ + R+ + +V
Sbjct: 146 ILLATPGRLLHVIVEMDLRLSYVQYVV 172
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 108 bits (260), Expect = 5e-24
Identities = 57/140 (40%), Positives = 86/140 (61%), Gaps = 4/140 (2%)
Frame = +3
Query: 414 DTRGN-EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAY 590
DT N FE+ L R++L G+ P+PIQ+A IP+AL+GKD+ A A GTGKT A+
Sbjct: 143 DTSVNVSFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAF 202
Query: 591 CIPVLEQV--DPK-KDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDD 761
+P+LE++ PK + L++VPTRELA+Q Q+ +L+ + V + GG +L+
Sbjct: 203 VLPILERMIYRPKGASCTRVLVLVPTRELAIQVFQVFRKLSTFIQLEVCLCAGGLDLKAQ 262
Query: 762 IMRIYQNVQVIIATPGRMID 821
+ V++ATPGR+ID
Sbjct: 263 EAALRSGPDVVVATPGRLID 282
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 105 bits (251), Expect = 6e-23
Identities = 53/146 (36%), Positives = 79/146 (54%)
Frame = +3
Query: 393 IKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGT 572
I+ D D + F E + + L GW KPS IQ+A++P AL GKDV+ A+ G+
Sbjct: 33 IEKDDEEDVKEKSFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGS 92
Query: 573 GKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNL 752
GKTGA+ IPVL+ + L++ PTRELA Q Q L + V GG ++
Sbjct: 93 GKTGAFAIPVLQSLLDHPQAFFCLVLTPTRELAFQIGQQFEALGSGIGLIAAVIVGGVDM 152
Query: 753 RDDIMRIYQNVQVIIATPGRMIDLMD 830
M + + +I+ATPGR++D ++
Sbjct: 153 AAQAMALARRPHIIVATPGRLVDHLE 178
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 98.3 bits (234), Expect = 6e-21
Identities = 68/233 (29%), Positives = 118/233 (50%), Gaps = 22/233 (9%)
Frame = +3
Query: 240 RDKFGKMMTENRIS---SSNHVGNSISQTKGEVDKSIDDVGWKSK--LKIPPKDRRIKTS 404
++ F + M ENR + + + K E + DD W+ K ++ +D RI
Sbjct: 226 KNSFYQEMMENRRTVDEKEQEMHRLEKELKKEKKVAHDDRHWRMKELSEMSDRDWRIFRE 285
Query: 405 DVT-DTRGNE-------FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARA 560
D +G +EE E+ + E G+ +P+PIQ +IPI L +DV+ A
Sbjct: 286 DFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVIGVA 345
Query: 561 KNGTGKTGAYCIPVLEQVD--PKKDTIQ-------ALIVVPTRELALQTSQICIELAKHT 713
+ G+GKT A+ +P+L + PK + + A+I+ PTRELA Q + + K
Sbjct: 346 ETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFGKLL 405
Query: 714 DIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
I+ + GG + D M++ V+V+IATPGR++D+++ + ++QC ++L
Sbjct: 406 GIKTVSVIGGASREDQGMKLRMGVEVVIATPGRLLDVLENRYLLLNQCTYVIL 458
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 95.1 bits (226), Expect = 6e-20
Identities = 53/165 (32%), Positives = 87/165 (52%), Gaps = 2/165 (1%)
Frame = +3
Query: 384 DRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 563
D R + F +F LK E+L I + G+E PS +Q IP A+ G DV+ +AK
Sbjct: 27 DARKTKGTYASIHSSGFRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAK 86
Query: 564 NGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTG 740
+G GKT + I L+Q++P + + + TRELA Q S+ +K+ ++V V G
Sbjct: 87 SGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFG 146
Query: 741 GTNLRDDIMRIYQNV-QVIIATPGRMIDLMDKQVARMDQCRMLVL 872
G ++ D R+ + +++ TPGRM+ L ++D+ + VL
Sbjct: 147 GMAIKKDEERLANDCPHIVVGTPGRMLALARSGKLKLDKVKYFVL 191
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 95.1 bits (226), Expect = 6e-20
Identities = 53/165 (32%), Positives = 87/165 (52%), Gaps = 2/165 (1%)
Frame = +3
Query: 384 DRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 563
D R + F +F LK E+L I + G+E PS +Q IP A+ G DV+ +AK
Sbjct: 27 DARKTKGTYASIHSSGFRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAK 86
Query: 564 NGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTG 740
+G GKT + I L+Q++P + + + TRELA Q S+ +K+ ++V V G
Sbjct: 87 SGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFG 146
Query: 741 GTNLRDDIMRIYQNV-QVIIATPGRMIDLMDKQVARMDQCRMLVL 872
G ++ D R+ + +++ TPGRM+ L ++D+ + VL
Sbjct: 147 GMAIKKDEERLANDCPHIVVGTPGRMLALARSGKLKLDKVKYFVL 191
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 95.1 bits (226), Expect = 6e-20
Identities = 53/165 (32%), Positives = 87/165 (52%), Gaps = 2/165 (1%)
Frame = +3
Query: 384 DRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 563
D R + F +F LK E+L I + G+E PS +Q IP A+ G DV+ +AK
Sbjct: 26 DARKTKGTYASIHSSGFRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAK 85
Query: 564 NGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTG 740
+G GKT + I L+Q++P + + + TRELA Q S+ +K+ ++V V G
Sbjct: 86 SGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFG 145
Query: 741 GTNLRDDIMRIYQNV-QVIIATPGRMIDLMDKQVARMDQCRMLVL 872
G ++ D R+ + +++ TPGRM+ L ++D+ + VL
Sbjct: 146 GMAIKKDEERLANDCPHIVVGTPGRMLALARSGKLKLDKVKYFVL 190
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 93.1 bits (221), Expect = 2e-19
Identities = 49/153 (32%), Positives = 86/153 (56%), Gaps = 5/153 (3%)
Frame = +3
Query: 429 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 608
EF E L ++ ++ K ++KP+ IQ S PIA+SG+D+++ AK G+GKT A+ +P L
Sbjct: 131 EFNEAPLPGQIHELLYGK-FQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALV 189
Query: 609 QVDPKKDTIQA-----LIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 773
+ + + L+++PTRELA Q ++ I+ +++ GG + +
Sbjct: 190 HITKQAHRQRGEGPAVLVLLPTRELAQQVQEVSIDFCHSLGLKMTCLFGGASKGPQARDL 249
Query: 774 YQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+ V +++ATPGR++D +D M +C LVL
Sbjct: 250 ERGVDIVVATPGRLLDFLDNGTTNMKKCSYLVL 282
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 91.1 bits (216), Expect = 1e-18
Identities = 50/155 (32%), Positives = 87/155 (56%), Gaps = 2/155 (1%)
Frame = +3
Query: 414 DTRGN-EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAY 590
D + N FE + ++ L + +++PSP+Q +IP+ L G+D+L +AK+GTGKT +
Sbjct: 17 DVQSNCTFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVF 76
Query: 591 CIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMR 770
+ +E +D + IQ +IV PTRE+++Q + ++A T R V GG+ + +++
Sbjct: 77 SVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TGARTSVYVGGSAHKLNLID 135
Query: 771 IYQ-NVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+ Q Q++I TPGR+ L+ M VL
Sbjct: 136 LKQTRPQIVIGTPGRIAQLVKLGAMNMSHVDFFVL 170
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 91.1 bits (216), Expect = 1e-18
Identities = 50/155 (32%), Positives = 87/155 (56%), Gaps = 2/155 (1%)
Frame = +3
Query: 414 DTRGN-EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAY 590
D + N FE + ++ L + +++PSP+Q +IP+ L G+D+L +AK+GTGKT +
Sbjct: 17 DVQSNCTFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVF 76
Query: 591 CIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMR 770
+ +E +D + IQ +IV PTRE+++Q + ++A T R V GG+ + +++
Sbjct: 77 SVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TGARTSVYVGGSAHKLNLID 135
Query: 771 IYQ-NVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+ Q Q++I TPGR+ L+ M VL
Sbjct: 136 LKQTRPQIVIGTPGRIAQLVKLGAMNMSHVDFFVL 170
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 90.2 bits (214), Expect = 2e-18
Identities = 54/164 (32%), Positives = 88/164 (53%), Gaps = 17/164 (10%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F + L + I G+++P+P+Q+ SIP G+D+++ A+ G+GKT A+ +P++
Sbjct: 168 FSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTGSGKTAAFLVPLVNA 227
Query: 612 V----------------DPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGG 743
+ KK AL++ PTREL+LQ + A T I + GG
Sbjct: 228 ILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQIFNESRKFAYRTPITSALLYGG 287
Query: 744 T-NLRDDIMRIYQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
N +D I ++ ++IATPGR+ID+MD+ + M+ CR LVL
Sbjct: 288 RENYKDQIHKLRLGCHILIATPGRLIDVMDQGLIGMEGCRYLVL 331
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 89.8 bits (213), Expect = 2e-18
Identities = 48/144 (33%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Frame = +3
Query: 462 LMGIFEK-GWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIP----VLEQVDPKK 626
+M + +K + KP+ IQ +IP +SG+DV+ AK G+GKT A+ +P +L+Q + ++
Sbjct: 315 MMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEE 374
Query: 627 -DTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIAT 803
D A+I+ PTRELA+QT + + AK ++V T GG + + I + + ++++ T
Sbjct: 375 GDGPIAVILAPTRELAMQTYKEANKFAKPLGLKVACTYGGVGISEQIADLKRGAEIVVCT 434
Query: 804 PGRMIDLMDKQVARMDQCRMLVLM 875
PGRMID++ ++ R + +
Sbjct: 435 PGRMIDVLAANSGKVTNLRRVTYL 458
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 89.0 bits (211), Expect = 4e-18
Identities = 44/111 (39%), Positives = 66/111 (59%)
Frame = +3
Query: 498 SPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQ 677
+P+Q A IP L G D+L A+ GTGKT A+ IP+L+++ I ALI+ PTRELA Q
Sbjct: 113 TPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQ 172
Query: 678 TSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMIDLMD 830
++ L K ++ V GG +L + + V++ATPGR+ DL++
Sbjct: 173 IAEQFTALGKPITLKCSVIVGGRSLIHQARELSERPHVVVATPGRLADLIE 223
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 89.0 bits (211), Expect = 4e-18
Identities = 44/111 (39%), Positives = 66/111 (59%)
Frame = +3
Query: 498 SPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQ 677
+P+Q A IP L G D+L A+ GTGKT A+ IP+L+++ I ALI+ PTRELA Q
Sbjct: 113 TPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQ 172
Query: 678 TSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMIDLMD 830
++ L K ++ V GG +L + + V++ATPGR+ DL++
Sbjct: 173 IAEQFTALGKPITLKCSVIVGGRSLIHQARELSERPHVVVATPGRLADLIE 223
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 88.6 bits (210), Expect = 5e-18
Identities = 53/138 (38%), Positives = 81/138 (58%), Gaps = 6/138 (4%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIP---- 599
F F + L+ I + +E+P+PIQ +IP ALSG+DVL AK G+GKT AY P
Sbjct: 267 FAHFSFDKLLMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVH 326
Query: 600 VLEQVDPKK-DTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIY 776
+++Q D K + A+IVVPTRELA+Q Q + K +I + GG + + +
Sbjct: 327 IMDQPDLKAGEGPVAVIVVPTRELAIQVFQEAKKFCKVYNINPICAYGGGSKWEQSNELQ 386
Query: 777 -QNVQVIIATPGRMIDLM 827
+ ++++ TPGR+IDL+
Sbjct: 387 NEGAEMVVCTPGRIIDLV 404
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 88.6 bits (210), Expect = 5e-18
Identities = 49/163 (30%), Positives = 91/163 (55%), Gaps = 16/163 (9%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F E ++ + G+ KP+P+Q+ SIP L+ +D+++ A+ G+GKT A+ +P+++
Sbjct: 141 FNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQH 200
Query: 612 V-DPKKDTIQ--------------ALIVVPTRELALQTSQICIELAKHTDIRVMVTTGG- 743
+ D ++ AL++ PTRELA+Q + + + ++I+ + GG
Sbjct: 201 ILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGGR 260
Query: 744 TNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
N RD + R+ ++IATPGR+ID++++ + CR LVL
Sbjct: 261 ENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVL 303
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 88.6 bits (210), Expect = 5e-18
Identities = 49/163 (30%), Positives = 91/163 (55%), Gaps = 16/163 (9%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F E ++ + G+ KP+P+Q+ SIP L+ +D+++ A+ G+GKT A+ +P+++
Sbjct: 125 FNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQH 184
Query: 612 V-DPKKDTIQ--------------ALIVVPTRELALQTSQICIELAKHTDIRVMVTTGG- 743
+ D ++ AL++ PTRELA+Q + + + ++I+ + GG
Sbjct: 185 ILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGGR 244
Query: 744 TNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
N RD + R+ ++IATPGR+ID++++ + CR LVL
Sbjct: 245 ENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVL 287
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 88.6 bits (210), Expect = 5e-18
Identities = 49/163 (30%), Positives = 91/163 (55%), Gaps = 16/163 (9%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F E ++ + G+ KP+P+Q+ SIP L+ +D+++ A+ G+GKT A+ +P+++
Sbjct: 122 FNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQH 181
Query: 612 V-DPKKDTIQ--------------ALIVVPTRELALQTSQICIELAKHTDIRVMVTTGG- 743
+ D ++ AL++ PTRELA+Q + + + ++I+ + GG
Sbjct: 182 ILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGGR 241
Query: 744 TNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
N RD + R+ ++IATPGR+ID++++ + CR LVL
Sbjct: 242 ENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVL 284
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 88.6 bits (210), Expect = 5e-18
Identities = 56/152 (36%), Positives = 84/152 (55%), Gaps = 5/152 (3%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
FE+F L L G+ + + KP+ IQ +I +L+G DV+ AK G+GKT A IPVLE
Sbjct: 78 FEDFPLSWRTLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLEA 137
Query: 612 VDPKKDT----IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQ 779
+ K + + ALI+ PTRELALQT + H + GG+++ + RI
Sbjct: 138 LWRAKWSPDYGLGALIISPTRELALQTFSTINAVGAHHGFSCGLVIGGSDVAFERNRI-S 196
Query: 780 NVQVIIATPGRMIDLMDKQV-ARMDQCRMLVL 872
+ +I+ TPGR++ MD+ D ++LVL
Sbjct: 197 GINIIVCTPGRLLQHMDENAQMSCDSLQVLVL 228
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 81.4 bits (192), Expect = 8e-16
Identities = 40/135 (29%), Positives = 77/135 (57%), Gaps = 6/135 (4%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F +F L +L I E GWEK + +QE+ I +AL K+++ RA+ G+GKTGA+ IP++++
Sbjct: 91 FADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLVQK 150
Query: 612 VDPKKDT------IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 773
+ + T A+I+ PT+EL Q ++ ++L++ + N ++ + +
Sbjct: 151 LIAESKTNDGSVGPSAVIIAPTKELITQIYKLFVKLSQALPFLQAINLCDINEEENSVWL 210
Query: 774 YQNVQVIIATPGRMI 818
V++ TPG+++
Sbjct: 211 EDRSHVVVTTPGKLL 225
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 81.0 bits (191), Expect = 1e-15
Identities = 48/146 (32%), Positives = 81/146 (55%), Gaps = 14/146 (9%)
Frame = +3
Query: 477 EKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPV----LEQVDP----KKDT 632
+KG P+ IQ IP+ALSG+D++ A G+GKT + +P+ LEQ + +
Sbjct: 207 QKGIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEG 266
Query: 633 IQALIVVPTRELALQTSQICIEL------AKHTDIRVMVTTGGTNLRDDIMRIYQNVQVI 794
LI+VP+RELA Q + IE+ A ++R + GG + + + + ++
Sbjct: 267 PFGLIIVPSRELARQIFDLIIEMFDALGKAGLPEMRAGLCIGGVPIGEQAKDVRDGIHIV 326
Query: 795 IATPGRMIDLMDKQVARMDQCRMLVL 872
+ATPGR+ D++ K++ ++ CR LVL
Sbjct: 327 VATPGRLSDMLTKKIINLEVCRYLVL 352
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 79.0 bits (186), Expect = 4e-15
Identities = 45/125 (36%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Frame = +3
Query: 459 LLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE---QVDPKKD 629
LL + G+ + IQ SI L GKDVLA AK G+GKT A+ +P +E +++ K+
Sbjct: 79 LLKAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAIELLHKLNWKQH 138
Query: 630 TIQALIVV-PTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIATP 806
+I+V PTREL++QT + EL + +++ + GG+N + ++ + V +++ATP
Sbjct: 139 NGTGVIIVSPTRELSMQTYGVLSELLEGSNLTYGLVMGGSNRSAEKDKLAKGVSILVATP 198
Query: 807 GRMID 821
GR++D
Sbjct: 199 GRLLD 203
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 76.2 bits (179), Expect = 3e-14
Identities = 42/156 (26%), Positives = 83/156 (53%), Gaps = 9/156 (5%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F + + + + + G+ + +PIQ+ ++P+ GKD+LA A+ G+GKT A+ +P++ +
Sbjct: 300 FSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMSR 359
Query: 612 VDPKKDT---------IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDI 764
+ +KD + +I+ PTRELA Q + + + + + GG N+ +
Sbjct: 360 LILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGGINVGYNK 419
Query: 765 MRIYQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+I + +I+ T GR+ + ++D+CR LVL
Sbjct: 420 SQIMKGCTIIVGTIGRVKHFCEDGAIKLDKCRYLVL 455
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 76.2 bits (179), Expect = 3e-14
Identities = 42/156 (26%), Positives = 83/156 (53%), Gaps = 9/156 (5%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F + + + + + G+ + +PIQ+ ++P+ GKD+LA A+ G+GKT A+ +P++ +
Sbjct: 300 FSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMSR 359
Query: 612 VDPKKDT---------IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDI 764
+ +KD + +I+ PTRELA Q + + + + + GG N+ +
Sbjct: 360 LILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGGINVGYNK 419
Query: 765 MRIYQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+I + +I+ T GR+ + ++D+CR LVL
Sbjct: 420 SQIMKGCTIIVGTIGRVKHFCEDGAIKLDKCRYLVL 455
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 75.4 bits (177), Expect = 5e-14
Identities = 52/161 (32%), Positives = 81/161 (50%), Gaps = 12/161 (7%)
Frame = +3
Query: 426 NEFEEFCLKRELLMGIFEK-GWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPV 602
N FE+ +MG K G+EKPSPIQ P+ LSG+D + ++ G+GKT A+ +P
Sbjct: 83 NSFEQAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPA 142
Query: 603 LEQVD------PKKDTIQ-----ALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTN 749
L +D K D Q L++ PTRELA Q ++ + + + GG +
Sbjct: 143 LLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIEGE-VKKYSYNGYKSVCLYGGGS 201
Query: 750 LRDDIMRIYQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+ + V+++IATPGR+ DL + V + +VL
Sbjct: 202 RPEQVEACRGGVEIVIATPGRLTDLSNDGVISLASVTYVVL 242
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 71.3 bits (167), Expect = 8e-13
Identities = 43/156 (27%), Positives = 80/156 (51%), Gaps = 9/156 (5%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F E L + + G+ K +PIQ+ ++P+ G D++A A+ G+GKT A+ +P++ +
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTR 402
Query: 612 V--DPKKDTI-------QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDI 764
+ D +T + +I+ PTRELA Q + A T + + GG + +
Sbjct: 403 LIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGYNK 462
Query: 765 MRIYQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+I + +I+ T GR+ ++ ++D+CR VL
Sbjct: 463 GQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVL 498
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 71.3 bits (167), Expect = 8e-13
Identities = 43/156 (27%), Positives = 80/156 (51%), Gaps = 9/156 (5%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F E L + + G+ K +PIQ+ ++P+ G D++A A+ G+GKT A+ +P++ +
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTR 402
Query: 612 V--DPKKDTI-------QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDI 764
+ D +T + +I+ PTRELA Q + A T + + GG + +
Sbjct: 403 LIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGYNK 462
Query: 765 MRIYQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+I + +I+ T GR+ ++ ++D+CR VL
Sbjct: 463 GQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVL 498
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 71.3 bits (167), Expect = 8e-13
Identities = 43/156 (27%), Positives = 80/156 (51%), Gaps = 9/156 (5%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F E L + + G+ K +PIQ+ ++P+ G D++A A+ G+GKT A+ +P++ +
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTR 402
Query: 612 V--DPKKDTI-------QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDI 764
+ D +T + +I+ PTRELA Q + A T + + GG + +
Sbjct: 403 LIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGYNK 462
Query: 765 MRIYQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+I + +I+ T GR+ ++ ++D+CR VL
Sbjct: 463 GQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVL 498
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 70.5 bits (165), Expect = 1e-12
Identities = 42/156 (26%), Positives = 78/156 (50%), Gaps = 9/156 (5%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F E L + + G+ K +PIQ+ ++P+ G D++A A+ G+GKT A+ +P++ +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 612 VDPKKDTIQA---------LIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDI 764
+ + D A +I+ PTREL Q + A T + + GG + +
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGYNK 673
Query: 765 MRIYQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+I + +I+ T GR+ ++ ++D+CR VL
Sbjct: 674 GQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVL 709
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 70.5 bits (165), Expect = 1e-12
Identities = 42/156 (26%), Positives = 78/156 (50%), Gaps = 9/156 (5%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F E L + + G+ K +PIQ+ ++P+ G D++A A+ G+GKT A+ +P++ +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 612 VDPKKDTIQA---------LIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDI 764
+ + D A +I+ PTREL Q + A T + + GG + +
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGYNK 673
Query: 765 MRIYQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+I + +I+ T GR+ ++ ++D+CR VL
Sbjct: 674 GQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVL 709
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 70.5 bits (165), Expect = 1e-12
Identities = 42/156 (26%), Positives = 78/156 (50%), Gaps = 9/156 (5%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
F E L + + G+ K +PIQ+ ++P+ G D++A A+ G+GKT A+ +P++ +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 612 VDPKKDTIQA---------LIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDI 764
+ + D A +I+ PTREL Q + A T + + GG + +
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGYNK 673
Query: 765 MRIYQNVQVIIATPGRMIDLMDKQVARMDQCRMLVL 872
+I + +I+ T GR+ ++ ++D+CR VL
Sbjct: 674 GQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVL 709
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 69.3 bits (162), Expect = 3e-12
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 13/211 (6%)
Frame = +3
Query: 240 RDKFGKMMTENRISSSNHVGNSISQTKGEVDKSIDDVGWKSKLKIPPKDRRIKTSDVTDT 419
+++ K + SS+ N+ T + + G ++ PK + + S TD
Sbjct: 94 KERLAKRKQKEAESSAKKSENATETTTEKPKEQKKRKGGENGDTGKPKKSKKEASKKTDI 153
Query: 420 RGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGK-DVLARAKNGTGKTGAYCI 596
+ + + L E+L I + G+ +P+ IQ A +P A+ + DVL A+ G+GKT A+ I
Sbjct: 154 SAWK-QFYFLPNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGI 212
Query: 597 P----VLEQVDPKKDT-------IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGG 743
P +LE D ++T +ALIV PTREL +Q + L T + GG
Sbjct: 213 PLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGG 272
Query: 744 -TNLRDDIMRIYQNVQVIIATPGRMIDLMDK 833
++ + + Q +++ATPGR+ +M +
Sbjct: 273 LAQVKQERIISQQRPDIVVATPGRLWAMMQE 303
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 67.7 bits (158), Expect = 1e-11
Identities = 53/199 (26%), Positives = 95/199 (47%), Gaps = 13/199 (6%)
Frame = +3
Query: 276 ISSSNHVGNSISQTKGEVDKSIDDVGWKSKLKIPPKDRRIKTSDVTDTRGN---EFEEFC 446
++S V +S ++ EV++++ DV + + + R + D N F +
Sbjct: 73 LASRKRVHDSDGDSENEVEETVGDVEKRMQKLLDDIRRTNRIFTWGDHLPNIILRFSDSS 132
Query: 447 LKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV---- 614
+ LL + E +PSPIQ SIP ++VLA A G+GKT A+ +PV++++
Sbjct: 133 MSPSLLNRLSENSIRQPSPIQMQSIPFMTERRNVLASAPTGSGKTLAFALPVIDEILELK 192
Query: 615 ------DPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIY 776
+ A+++ PTRELA QT ++ +T I +G DI
Sbjct: 193 QRADYSSSNSSKLLAVVLEPTRELAAQTYTEFLKYCANTSISAANFSGE---ETDI---- 245
Query: 777 QNVQVIIATPGRMIDLMDK 833
Q+ ++++TP R++ +DK
Sbjct: 246 QHADILVSTPNRIVFHLDK 264
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 66.1 bits (154), Expect = 3e-11
Identities = 42/139 (30%), Positives = 74/139 (53%), Gaps = 12/139 (8%)
Frame = +3
Query: 492 KPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIP----VLEQVDPKKDTI------QA 641
+P+PIQ AS + G DV+A A G+GKT A+ IP ++E+ + +D +
Sbjct: 758 RPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRL 817
Query: 642 LIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDI--MRIYQNVQVIIATPGRM 815
LIV PTREL QT +L T ++ + GG + ++ +R + + +++AT GR+
Sbjct: 818 LIVAPTRELVNQTFTTARQLTYETGLKCGLAFGGYSRNANVQHLRSFSQLNILVATMGRL 877
Query: 816 IDLMDKQVARMDQCRMLVL 872
D ++ + + + +VL
Sbjct: 878 QDFVNAGEVSLSKMKYIVL 896
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 66.1 bits (154), Expect = 3e-11
Identities = 42/139 (30%), Positives = 74/139 (53%), Gaps = 12/139 (8%)
Frame = +3
Query: 492 KPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIP----VLEQVDPKKDTI------QA 641
+P+PIQ AS + G DV+A A G+GKT A+ IP ++E+ + +D +
Sbjct: 758 RPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRL 817
Query: 642 LIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDI--MRIYQNVQVIIATPGRM 815
LIV PTREL QT +L T ++ + GG + ++ +R + + +++AT GR+
Sbjct: 818 LIVAPTRELVNQTFTTARQLTYETGLKCGLAFGGYSRNANVQHLRSFSQLNILVATMGRL 877
Query: 816 IDLMDKQVARMDQCRMLVL 872
D ++ + + + +VL
Sbjct: 878 QDFVNAGEVSLSKMKYIVL 896
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 65.3 bits (152), Expect = 6e-11
Identities = 42/140 (30%), Positives = 76/140 (54%), Gaps = 4/140 (2%)
Frame = +3
Query: 426 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSG--KDVLARAKNGTGKTGAYCIP 599
+ F E LK E+L + ++ P+ IQE ++P+ L +++A+A++GTGKT A+ +
Sbjct: 209 SSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLT 268
Query: 600 VLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTD-IRVMVTTGGTNLRDDIMRIY 776
+L ++D Q + + PT ELA Q ++ ++ K D +++ G N+ MR
Sbjct: 269 MLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMA--AMRGR 326
Query: 777 Q-NVQVIIATPGRMIDLMDK 833
+ Q++I TPG D + K
Sbjct: 327 KLTEQIVIGTPGITRDYLQK 346
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 65.3 bits (152), Expect = 6e-11
Identities = 42/140 (30%), Positives = 76/140 (54%), Gaps = 4/140 (2%)
Frame = +3
Query: 426 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSG--KDVLARAKNGTGKTGAYCIP 599
+ F E LK E+L + ++ P+ IQE ++P+ L +++A+A++GTGKT A+ +
Sbjct: 234 SSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLT 293
Query: 600 VLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTD-IRVMVTTGGTNLRDDIMRIY 776
+L ++D Q + + PT ELA Q ++ ++ K D +++ G N+ MR
Sbjct: 294 MLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMA--AMRGR 351
Query: 777 Q-NVQVIIATPGRMIDLMDK 833
+ Q++I TPG D + K
Sbjct: 352 KLTEQIVIGTPGITRDYLQK 371
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical protein
T07D4.4a protein.
Length = 1022
Score = 65.3 bits (152), Expect = 6e-11
Identities = 42/140 (30%), Positives = 76/140 (54%), Gaps = 4/140 (2%)
Frame = +3
Query: 426 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSG--KDVLARAKNGTGKTGAYCIP 599
+ F E LK E+L + ++ P+ IQE ++P+ L +++A+A++GTGKT A+ +
Sbjct: 618 SSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLT 677
Query: 600 VLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTD-IRVMVTTGGTNLRDDIMRIY 776
+L ++D Q + + PT ELA Q ++ ++ K D +++ G N+ MR
Sbjct: 678 MLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMA--AMRGR 735
Query: 777 Q-NVQVIIATPGRMIDLMDK 833
+ Q++I TPG D + K
Sbjct: 736 KLTEQIVIGTPGITRDYLQK 755
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 65.3 bits (152), Expect = 6e-11
Identities = 38/129 (29%), Positives = 70/129 (54%), Gaps = 4/129 (3%)
Frame = +3
Query: 462 LMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKK---DT 632
L+ +F+K ++ + +Q S L+ DV+ + G+GKT A+ +P++ + K
Sbjct: 21 LLEVFDKSYKSFTDVQVLSGTHLLNLSDVVVESPTGSGKTLAFVLPMMRMIQNAKLQPAD 80
Query: 633 IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDI-MRIYQNVQVIIATPG 809
I ALI+ P+REL Q + A+ ++ V TGG + +I M +NV +++ATPG
Sbjct: 81 IGALILSPSRELCSQIVSVIQPFAEKLNLTVETVTGGQKVDKNIKMFKNKNVNILVATPG 140
Query: 810 RMIDLMDKQ 836
R+ ++ +
Sbjct: 141 RLFQIIQHE 149
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 64.9 bits (151), Expect = 7e-11
Identities = 42/132 (31%), Positives = 67/132 (50%), Gaps = 10/132 (7%)
Frame = +3
Query: 504 IQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV----------DPKKDTIQALIVV 653
IQ A IP L G DVL +A+ GKT A+ +P+++++ + D ALI+
Sbjct: 407 IQGAMIPQVLDGHDVLGQAETSAGKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILA 466
Query: 654 PTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMIDLMDK 833
PTRELA Q + ++TDI V+++ G ++ + I ++I T GR++D K
Sbjct: 467 PTRELAAQIHEALRTYCQNTDIIVLLSYGQSDRARSLNEIRNGCDILIGTCGRIMDFTVK 526
Query: 834 QVARMDQCRMLV 869
+ R LV
Sbjct: 527 SHISLLHLRFLV 538
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 63.3 bits (147), Expect = 2e-10
Identities = 32/105 (30%), Positives = 59/105 (56%)
Frame = +3
Query: 447 LKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKK 626
LK ELL GI+ G+EKPS IQ++++ +GKDV +++ G+GKT I +L+ +D +
Sbjct: 3 LKEELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGIDCED 62
Query: 627 DTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDD 761
+Q +++ P R +A + + L ++ ++ T +D
Sbjct: 63 AHLQVILLAPQRGMAQRAHEQLKSLGRNLNVNATCLGFDTTAEND 107
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 60.1 bits (139), Expect = 2e-09
Identities = 45/136 (33%), Positives = 71/136 (52%), Gaps = 13/136 (9%)
Frame = +3
Query: 465 MGIFEKGWEKPSPIQEASIPIALSGK-DVLARAKNGTGKTGAYCIP----VLEQVDPKKD 629
M IF + +P+ IQ A +P A+ + DVL A+ G+GKT A+ IP +LE D ++
Sbjct: 1 MLIFFFRFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQE 60
Query: 630 T-------IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGG-TNLRDDIMRIYQNV 785
T +ALIV PTREL +Q + L T + GG ++ + + Q
Sbjct: 61 TESTEVRGPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQERIISQQRP 120
Query: 786 QVIIATPGRMIDLMDK 833
+++ATPGR+ +M +
Sbjct: 121 DIVVATPGRLWAMMQE 136
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 52.8 bits (121), Expect = 3e-07
Identities = 24/61 (39%), Positives = 35/61 (57%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
FEEF + EL + W P+ +Q +IP L G D L A+ G+GKTGA+ +P+ +
Sbjct: 4 FEEFGIIPELSDALSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLPIAQI 63
Query: 612 V 614
V
Sbjct: 64 V 64
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 49.2 bits (112), Expect = 4e-06
Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 6/121 (4%)
Frame = +3
Query: 495 PSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTI-QALIVVPTRELA 671
PS E P L +DV A G+GKT Y +PVL V K I QA+I+VP + L
Sbjct: 142 PSLFFEIRSPPPLRPRDVAIAAPTGSGKTICYVLPVLAAVGSKPSKILQAVILVPVQTL- 200
Query: 672 LQTSQICIELAKHTD----IRVMVTTGGTNLRDDIMRIYQN-VQVIIATPGRMIDLMDKQ 836
+QI E + D +V+ +G + + ++ + VI+ATP R++ + +
Sbjct: 201 --VAQIVDEFKRWNDESGVAKVVSLSGANDFEKEARQLASDPPNVIVATPARLVQHLTSK 258
Query: 837 V 839
+
Sbjct: 259 I 259
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 34.3 bits (75), Expect = 0.12
Identities = 26/118 (22%), Positives = 49/118 (41%), Gaps = 3/118 (2%)
Frame = +3
Query: 507 QEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKD---TIQALIVVPTRELALQ 677
QE +AL GK+ + A G+GKT + E + + +AL + P + Q
Sbjct: 297 QEELCQVALQGKNTIVTAPTGSGKTVIAANIIKEHFESRSSEGKRFKALFMTPNSMILNQ 356
Query: 678 TSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVARMD 851
+ H + G N+ + Q+ +I+ATP +++L ++ +D
Sbjct: 357 QAASISSYLDHV-YHTQIIQGSDNV--PTRNVIQSKDLIVATPQMIVNLCNEHRNSLD 411
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 34.3 bits (75), Expect = 0.12
Identities = 26/118 (22%), Positives = 49/118 (41%), Gaps = 3/118 (2%)
Frame = +3
Query: 507 QEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKD---TIQALIVVPTRELALQ 677
QE +AL GK+ + A G+GKT + E + + +AL + P + Q
Sbjct: 297 QEELCQVALQGKNTIVTAPTGSGKTVIAANIIKEHFESRSSEGKRFKALFMTPNSMILNQ 356
Query: 678 TSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVARMD 851
+ H + G N+ + Q+ +I+ATP +++L ++ +D
Sbjct: 357 QAASISSYLDHV-YHTQIIQGSDNV--PTRNVIQSKDLIVATPQMIVNLCNEHRNSLD 411
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 32.7 bits (71), Expect = 0.36
Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 1/113 (0%)
Frame = +3
Query: 477 EKGWEKPSPIQ-EASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVV 653
E G++ +PIQ + + S ++V+ A NG+GKT + VL + + +A+ +
Sbjct: 1316 ESGFKVFNPIQTQVFRTVFESNENVIVCAPNGSGKTAIAELAVLRHFENTPEA-KAVYIT 1374
Query: 654 PTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGR 812
P ++A + + +V G D +++ Q Q+II+TP R
Sbjct: 1375 PMEDMATKVYADWKRRLEPAIGHTIVLLTGEQTMD--LKLAQRGQLIISTPER 1425
>U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical
protein K02F3.12b protein.
Length = 608
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 489 EKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 605
EK P+Q A+I +S +D + G GK+ Y +P L
Sbjct: 85 EKFRPLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPAL 123
>U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical
protein K02F3.12a protein.
Length = 631
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 489 EKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 605
EK P+Q A+I +S +D + G GK+ Y +P L
Sbjct: 108 EKFRPLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPAL 146
>Z70757-5|CAA94801.1| 110|Caenorhabditis elegans Hypothetical
protein ZK287.5 protein.
Length = 110
Score = 28.3 bits (60), Expect = 7.7
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 746 CASCSNHYTNVCVFCQFN 693
CA C NH ++C+ CQ N
Sbjct: 44 CAICRNHIMDLCIECQAN 61
>AB077287-1|BAB83695.1| 101|Caenorhabditis elegans RING-H2 finger
protein Rbx1 protein.
Length = 101
Score = 28.3 bits (60), Expect = 7.7
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 746 CASCSNHYTNVCVFCQFN 693
CA C NH ++C+ CQ N
Sbjct: 35 CAICRNHIMDLCIECQAN 52
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,061,796
Number of Sequences: 27780
Number of extensions: 358949
Number of successful extensions: 983
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 937
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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