Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_P03
(894 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q96F24 Cluster: Nuclear receptor-binding factor 2; n=26... 56 1e-06
UniRef50_Q7PGI4 Cluster: ENSANGP00000024294; n=2; Culicidae|Rep:... 54 5e-06
UniRef50_Q6DHJ4 Cluster: Nuclear receptor binding factor 2; n=2;... 53 1e-05
UniRef50_A7RH16 Cluster: Predicted protein; n=1; Nematostella ve... 52 2e-05
UniRef50_UPI000054986D Cluster: PREDICTED: similar to comodulato... 50 8e-05
UniRef50_UPI0000F2AE4A Cluster: PREDICTED: hypothetical protein;... 49 1e-04
UniRef50_UPI0000E45E24 Cluster: PREDICTED: similar to nuclear re... 49 1e-04
UniRef50_UPI00015547A6 Cluster: PREDICTED: similar to Nuclear re... 47 7e-04
UniRef50_UPI00003BFC98 Cluster: PREDICTED: similar to nuclear re... 42 0.028
UniRef50_Q9W0M6 Cluster: CG13886-PA; n=3; Sophophora|Rep: CG1388... 38 0.35
UniRef50_Q24CQ3 Cluster: Putative uncharacterized protein; n=1; ... 35 2.4
UniRef50_A3GI05 Cluster: Hypothetical WD-40 repeat protein; n=1;... 33 7.4
>UniRef50_Q96F24 Cluster: Nuclear receptor-binding factor 2; n=26;
Tetrapoda|Rep: Nuclear receptor-binding factor 2 - Homo
sapiens (Human)
Length = 287
Score = 56.0 bits (129), Expect = 1e-06
Identities = 27/47 (57%), Positives = 33/47 (70%)
Frame = +3
Query: 222 PLNLAHQQHRRAEAHLKNHRYDEAMQCHQSAAELLVDAMKLTTSTLA 362
PLNLAHQQ RRA+ L +Y+EA+ CH+ AA L +AMKLT S A
Sbjct: 7 PLNLAHQQSRRADRLLAAGKYEEAISCHKKAAAYLSEAMKLTQSEQA 53
>UniRef50_Q7PGI4 Cluster: ENSANGP00000024294; n=2; Culicidae|Rep:
ENSANGP00000024294 - Anopheles gambiae str. PEST
Length = 254
Score = 54.0 bits (124), Expect = 5e-06
Identities = 28/74 (37%), Positives = 41/74 (55%)
Frame = +3
Query: 210 MESHPLNLAHQQHRRAEAHLKNHRYDEAMQCHQSAAELLVDAMKLTTSTLALXGYYAATQ 389
ME+ LN AH RRAE KN R+DEA++CH+ A +A+KL T+T+ +
Sbjct: 1 MENSHLNRAHMYGRRAENFAKNRRFDEAIECHRKAVSHFNEALKLQTNTVVQESLQLQRK 60
Query: 390 LSLKTKRFNKVQKR 431
LK + V+K+
Sbjct: 61 YHLKQVDWMLVRKQ 74
Score = 50.4 bits (115), Expect = 6e-05
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Frame = +1
Query: 370 AITLQHSYHLKQKDLIKYKKEQYVRVKKAMDTIKRLGKEPIS-NLQGHD-YAQLQIAIYR 543
++ LQ YHLKQ D + +K+QY R +A+D +R + ++ ++ D Y LQ+AIY
Sbjct: 54 SLQLQRKYHLKQVDWMLVRKQQYERYLRALDYQRRKNPDFLAQQIEKMDKYNDLQVAIYH 113
Query: 544 AINETDSLLHIL 579
+++TD LL L
Sbjct: 114 NLDDTDGLLESL 125
>UniRef50_Q6DHJ4 Cluster: Nuclear receptor binding factor 2; n=2;
Clupeocephala|Rep: Nuclear receptor binding factor 2 -
Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 247
Score = 52.8 bits (121), Expect = 1e-05
Identities = 23/42 (54%), Positives = 33/42 (78%)
Frame = +3
Query: 222 PLNLAHQQHRRAEAHLKNHRYDEAMQCHQSAAELLVDAMKLT 347
PLNLAHQQ R+A+ L ++++A+ CH+ AA+LL +AMKLT
Sbjct: 7 PLNLAHQQCRKADRLLAAGKFEDAISCHRKAADLLKEAMKLT 48
>UniRef50_A7RH16 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 276
Score = 52.0 bits (119), Expect = 2e-05
Identities = 23/48 (47%), Positives = 33/48 (68%)
Frame = +3
Query: 222 PLNLAHQQHRRAEAHLKNHRYDEAMQCHQSAAELLVDAMKLTTSTLAL 365
PLN AH Q R+AEA L + ++ +A+ CHQ AAE +++AM +T AL
Sbjct: 4 PLNSAHLQERKAEALLNSFKFADAISCHQKAAEYIMEAMNMTKVAQAL 51
>UniRef50_UPI000054986D Cluster: PREDICTED: similar to comodulator
of PPAR and RXR 1; COPR1; n=2; Danio rerio|Rep:
PREDICTED: similar to comodulator of PPAR and RXR 1;
COPR1 - Danio rerio
Length = 190
Score = 50.0 bits (114), Expect = 8e-05
Identities = 28/74 (37%), Positives = 43/74 (58%)
Frame = +3
Query: 222 PLNLAHQQHRRAEAHLKNHRYDEAMQCHQSAAELLVDAMKLTTSTLALXGYYAATQLSLK 401
PLN AH RRA+ + +Y+EA++CHQ AAELL +A +T S +LSL+
Sbjct: 7 PLNRAHHYGRRADQLVMKGKYEEAIECHQEAAELLKEASSMTQS--------QQVRLSLE 58
Query: 402 TKRFNKVQKRAICQ 443
+R +Q++ + Q
Sbjct: 59 LQRDRHLQQQRLIQ 72
>UniRef50_UPI0000F2AE4A Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 557
Score = 49.2 bits (112), Expect = 1e-04
Identities = 29/70 (41%), Positives = 42/70 (60%)
Frame = +3
Query: 234 AHQQHRRAEAHLKNHRYDEAMQCHQSAAELLVDAMKLTTSTLALXGYYAATQLSLKTKRF 413
AHQQ R+A+ L +Y+EA+ CHQ AA L +AMKLT S A QLSL+ +R
Sbjct: 281 AHQQSRKADRSLAAGKYEEAISCHQKAAAYLSEAMKLTQSEQA--------QLSLELQRD 332
Query: 414 NKVQKRAICQ 443
+ +++ + Q
Sbjct: 333 SHMKQLLLIQ 342
>UniRef50_UPI0000E45E24 Cluster: PREDICTED: similar to nuclear
receptor binding factor-2; n=2; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to nuclear receptor
binding factor-2 - Strongylocentrotus purpuratus
Length = 343
Score = 49.2 bits (112), Expect = 1e-04
Identities = 22/48 (45%), Positives = 33/48 (68%)
Frame = +3
Query: 222 PLNLAHQQHRRAEAHLKNHRYDEAMQCHQSAAELLVDAMKLTTSTLAL 365
PLN AHQ R+AE + N +D A+QC+++A+E +V AM+ T +AL
Sbjct: 8 PLNRAHQCERKAERMMNNGIHDAALQCYKNASEYIVQAMEKTKDAVAL 55
>UniRef50_UPI00015547A6 Cluster: PREDICTED: similar to Nuclear
receptor binding factor 2; n=1; Ornithorhynchus
anatinus|Rep: PREDICTED: similar to Nuclear receptor
binding factor 2 - Ornithorhynchus anatinus
Length = 485
Score = 46.8 bits (106), Expect = 7e-04
Identities = 21/43 (48%), Positives = 30/43 (69%)
Frame = +3
Query: 234 AHQQHRRAEAHLKNHRYDEAMQCHQSAAELLVDAMKLTTSTLA 362
AHQQ R+A+ +L +++EA+ CH+ AA L +AMKLT S A
Sbjct: 207 AHQQSRKADRYLAAGKFEEAISCHKKAAAYLSEAMKLTQSEQA 249
>UniRef50_UPI00003BFC98 Cluster: PREDICTED: similar to nuclear
receptor binding factor 2 isoform 1; n=1; Apis
mellifera|Rep: PREDICTED: similar to nuclear receptor
binding factor 2 isoform 1 - Apis mellifera
Length = 262
Score = 41.5 bits (93), Expect = 0.028
Identities = 17/37 (45%), Positives = 28/37 (75%)
Frame = +3
Query: 225 LNLAHQQHRRAEAHLKNHRYDEAMQCHQSAAELLVDA 335
L+ AH++ RRA+A L+ R++EA +CH++ A LL +A
Sbjct: 13 LSNAHEKQRRADALLQEGRFEEAAECHETVASLLEEA 49
Score = 34.3 bits (75), Expect = 4.3
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 10/80 (12%)
Frame = +1
Query: 370 AITLQHSYHLKQKDLIKYKKEQYVRVKKAMDTI-KRLGKEPISNLQGHDYAQ-------- 522
++ LQ YH +Q +++ K+ QY K ++ K + + +S D ++
Sbjct: 92 SLALQRDYHKRQAAVVRMKQAQYEEYKATLENQRKEILSKQVSKQVEKDTSEFTSDKFDG 151
Query: 523 -LQIAIYRAINETDSLLHIL 579
L+ AIYR I E DSLL ++
Sbjct: 152 SLRQAIYRTIEEQDSLLTLI 171
>UniRef50_Q9W0M6 Cluster: CG13886-PA; n=3; Sophophora|Rep:
CG13886-PA - Drosophila melanogaster (Fruit fly)
Length = 604
Score = 37.9 bits (84), Expect = 0.35
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = +3
Query: 201 GTKMESHPLNLAHQQHRRAEAHLKNHRYDEAMQCHQSAAELLVDAMK 341
G K P + AH RR+E ++NHRY+EA++ +++ + DA K
Sbjct: 389 GFKWNYLPKSKAHFHERRSERFIRNHRYEEAIKALETSLIYMQDAQK 435
>UniRef50_Q24CQ3 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 368
Score = 35.1 bits (77), Expect = 2.4
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Frame = +1
Query: 388 SYHLKQKDLIKYKKEQYVRVKKAMDTIKRLGK---EPISNLQGHDYAQLQI 531
S+ L+QK+LI K QY++ KK++ + LGK + SN + + Q+QI
Sbjct: 110 SHSLQQKNLILQNKHQYIQTKKSVSFYQDLGKYYEQKESNTKSKENIQIQI 160
>UniRef50_A3GI05 Cluster: Hypothetical WD-40 repeat protein; n=1;
Pichia stipitis|Rep: Hypothetical WD-40 repeat protein -
Pichia stipitis (Yeast)
Length = 1117
Score = 33.5 bits (73), Expect = 7.4
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 8/64 (12%)
Frame = -1
Query: 315 QHFDDIALLHHICDSSSE-LQHDDVA--DVPNLVDEI----PFWC-HPFTFNNWNQKELP 160
++ D+ +C + E +Q D+ + NLVDE+ P W HP FN + QKE P
Sbjct: 940 EYSPDLGNYRDVCSFTLEDIQKIDIKANEKSNLVDELRMQLPRWIGHPILFNRFPQKEHP 999
Query: 159 SLAF 148
+AF
Sbjct: 1000 KIAF 1003
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 623,732,146
Number of Sequences: 1657284
Number of extensions: 9790756
Number of successful extensions: 25259
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 24310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25223
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 80751996367
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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