Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_P03
         (894 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-141|AAF47417.1|  604|Drosophila melanogaster CG13886-PA...    38   0.019
AY089285-1|AAL90023.1|  579|Drosophila melanogaster AT08308p pro...    33   0.40 
AE014296-3576|AAF51747.2|  579|Drosophila melanogaster CG7634-PA...    33   0.40 
AE014298-2123|AAF48439.1|  689|Drosophila melanogaster CG6211-PA...    30   4.9  

>AE014296-141|AAF47417.1|  604|Drosophila melanogaster CG13886-PA
           protein.
          Length = 604

 Score = 37.9 bits (84), Expect = 0.019
 Identities = 17/47 (36%), Positives = 28/47 (59%)
 Frame = +3

Query: 201 GTKMESHPLNLAHQQHRRAEAHLKNHRYDEAMQCHQSAAELLVDAMK 341
           G K    P + AH   RR+E  ++NHRY+EA++  +++   + DA K
Sbjct: 389 GFKWNYLPKSKAHFHERRSERFIRNHRYEEAIKALETSLIYMQDAQK 435


>AY089285-1|AAL90023.1|  579|Drosophila melanogaster AT08308p
           protein.
          Length = 579

 Score = 33.5 bits (73), Expect = 0.40
 Identities = 16/41 (39%), Positives = 26/41 (63%)
 Frame = +3

Query: 219 HPLNLAHQQHRRAEAHLKNHRYDEAMQCHQSAAELLVDAMK 341
           +P+  ++  H+ AE HLK+HR+DE   C  SA + + +A K
Sbjct: 452 YPIEKSYLLHQMAEIHLKSHRFDE---CCFSARKSIEEAKK 489


>AE014296-3576|AAF51747.2|  579|Drosophila melanogaster CG7634-PA
           protein.
          Length = 579

 Score = 33.5 bits (73), Expect = 0.40
 Identities = 16/41 (39%), Positives = 26/41 (63%)
 Frame = +3

Query: 219 HPLNLAHQQHRRAEAHLKNHRYDEAMQCHQSAAELLVDAMK 341
           +P+  ++  H+ AE HLK+HR+DE   C  SA + + +A K
Sbjct: 452 YPIEKSYLLHQMAEIHLKSHRFDE---CCFSARKSIEEAKK 489


>AE014298-2123|AAF48439.1|  689|Drosophila melanogaster CG6211-PA
           protein.
          Length = 689

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +3

Query: 240 QQHRRAEAHLKNHRYDEAMQCHQSAAELLVD 332
           +Q +R E    N R+DE MQ HQ  +EL V+
Sbjct: 621 EQSQRYELPHANQRFDEIMQEHQKQSELYVN 651


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,970,502
Number of Sequences: 53049
Number of extensions: 459641
Number of successful extensions: 1308
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1296
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4341591036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)