Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_P02
         (909 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0833 - 25196091-25196372,25196464-25196565,25196640-251968...    31   0.96 
08_01_0132 + 1055977-1056483,1058083-1058186,1058330-1058385,105...    30   2.9  
12_02_0082 - 13372997-13373863,13373928-13374386                       29   3.9  
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066     29   6.7  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.9  
07_03_1497 - 26990647-26991531,26991609-26991967,26992302-26992371     28   8.9  

>06_03_0833 -
           25196091-25196372,25196464-25196565,25196640-25196838,
           25196978-25197278,25197471-25197645,25197842-25198012,
           25198207-25198239
          Length = 420

 Score = 31.5 bits (68), Expect = 0.96
 Identities = 16/50 (32%), Positives = 21/50 (42%)
 Frame = +1

Query: 520 CWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPL 669
           CWR  +        T  D Q    +    +KD    P + PSC L+F PL
Sbjct: 283 CWRHFLNQDFAMFATAGDDQWNPEDHLPSFKDDSLIPYDVPSCHLIFIPL 332


>08_01_0132 +
           1055977-1056483,1058083-1058186,1058330-1058385,
           1058534-1058688,1058842-1058955,1059207-1059449
          Length = 392

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = +3

Query: 546 PPDEHHKNRRSSQRWRNPTGL*RYQAFPPGSSLVRSPVPTPAAYRXTCP 692
           P    + +  SS    +P+ +  Y  +PP  +   SP PTPAA+  +CP
Sbjct: 90  PSPSSYSSSSSSSSSSSPS-VRHYHYYPPSPTRSSSP-PTPAAHTTSCP 136


>12_02_0082 - 13372997-13373863,13373928-13374386
          Length = 441

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 18/54 (33%), Positives = 26/54 (48%)
 Frame = +1

Query: 643 SCALLFRPLPLTGXPVRLSPFREAWRFLIAHAVGISXXXXXXXXQAWAVCTNPP 804
           SCALLF P+PL G  + L P  +  R+    ++ +S         A A  T+ P
Sbjct: 164 SCALLFSPMPLDGPTLGLLPSIDC-RYSTKASIPVSPIAVDVTPLALAPLTSQP 216


>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
          Length = 646

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = +3

Query: 588 WRNPTGL*RYQAFPPGSSLVRSPVPTPAAYRXTCPPF 698
           W  P     Y   PPGSS+   P P P   + T PP+
Sbjct: 436 WGQPPPYASYPPPPPGSSMYNPPPPAPG--QATPPPY 470


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +3

Query: 300 NESAN---ARGEAVCVLGALPLPRSLTRCAR 383
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>07_03_1497 - 26990647-26991531,26991609-26991967,26992302-26992371
          Length = 437

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -2

Query: 731 AMRKRHASRKGERRTGXPVSGRGRNRR 651
           A+   HASR  + +    V GRGRN+R
Sbjct: 16  ALSDEHASRMSQTQCSKVVRGRGRNKR 42


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,605,005
Number of Sequences: 37544
Number of extensions: 478590
Number of successful extensions: 1536
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1486
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1536
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)