Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_O19
(909 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L19527-1|AAA19815.1| 136|Homo sapiens ribosomal protein L27 pro... 93 2e-18
L05094-1|AAC15857.1| 136|Homo sapiens ribosomal protein L27 pro... 93 2e-18
BC098560-1|AAH98560.1| 136|Homo sapiens ribosomal protein L27 p... 93 2e-18
BC021886-1|AAH21886.1| 140|Homo sapiens RPL27 protein protein. 93 2e-18
BC010026-1|AAH10026.1| 136|Homo sapiens ribosomal protein L27 p... 93 2e-18
BC007273-1|AAH07273.1| 136|Homo sapiens ribosomal protein L27 p... 93 2e-18
BC002588-1|AAH02588.1| 136|Homo sapiens ribosomal protein L27 p... 93 2e-18
BC001700-1|AAH01700.1| 136|Homo sapiens ribosomal protein L27 p... 93 2e-18
AB061851-1|BAB79492.1| 136|Homo sapiens ribosomal protein L27 p... 93 2e-18
U25752-1|AAA93226.1| 40|Homo sapiens ribosomal protein L27 pro... 60 8e-09
>L19527-1|AAA19815.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 92.7 bits (220), Expect = 2e-18
Identities = 42/53 (79%), Positives = 44/53 (83%)
Frame = +3
Query: 192 KPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVD 350
+PY HA VAGIDRYPRKV MGK KI KRSKIK FVKV NYNHLMPTRY+VD
Sbjct: 36 RPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVD 88
Score = 64.1 bits (149), Expect = 7e-10
Identities = 33/71 (46%), Positives = 45/71 (63%)
Frame = +2
Query: 86 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSXQAIRACLRRWYRQVPPESAQEDGKE 265
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTS + L + P + GK+
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 266 *NPQEVQDKAF 298
+ + K+F
Sbjct: 61 KIAKRSKIKSF 71
Score = 60.5 bits (140), Expect = 8e-09
Identities = 26/39 (66%), Positives = 33/39 (84%), Gaps = 1/39 (2%)
Frame = +1
Query: 376 KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 489
KD+ +DPA ++K R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 98 KDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
>L05094-1|AAC15857.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 92.7 bits (220), Expect = 2e-18
Identities = 42/53 (79%), Positives = 44/53 (83%)
Frame = +3
Query: 192 KPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVD 350
+PY HA VAGIDRYPRKV MGK KI KRSKIK FVKV NYNHLMPTRY+VD
Sbjct: 36 RPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVD 88
Score = 64.1 bits (149), Expect = 7e-10
Identities = 33/71 (46%), Positives = 45/71 (63%)
Frame = +2
Query: 86 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSXQAIRACLRRWYRQVPPESAQEDGKE 265
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTS + L + P + GK+
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 266 *NPQEVQDKAF 298
+ + K+F
Sbjct: 61 KIAKRSKIKSF 71
Score = 60.5 bits (140), Expect = 8e-09
Identities = 26/39 (66%), Positives = 33/39 (84%), Gaps = 1/39 (2%)
Frame = +1
Query: 376 KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 489
KD+ +DPA ++K R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 98 KDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
>BC098560-1|AAH98560.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 92.7 bits (220), Expect = 2e-18
Identities = 42/53 (79%), Positives = 44/53 (83%)
Frame = +3
Query: 192 KPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVD 350
+PY HA VAGIDRYPRKV MGK KI KRSKIK FVKV NYNHLMPTRY+VD
Sbjct: 36 RPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVD 88
Score = 64.1 bits (149), Expect = 7e-10
Identities = 33/71 (46%), Positives = 45/71 (63%)
Frame = +2
Query: 86 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSXQAIRACLRRWYRQVPPESAQEDGKE 265
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTS + L + P + GK+
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 266 *NPQEVQDKAF 298
+ + K+F
Sbjct: 61 KIAKRSKIKSF 71
Score = 60.5 bits (140), Expect = 8e-09
Identities = 26/39 (66%), Positives = 33/39 (84%), Gaps = 1/39 (2%)
Frame = +1
Query: 376 KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 489
KD+ +DPA ++K R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 98 KDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
>BC021886-1|AAH21886.1| 140|Homo sapiens RPL27 protein protein.
Length = 140
Score = 92.7 bits (220), Expect = 2e-18
Identities = 42/53 (79%), Positives = 44/53 (83%)
Frame = +3
Query: 192 KPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVD 350
+PY HA VAGIDRYPRKV MGK KI KRSKIK FVKV NYNHLMPTRY+VD
Sbjct: 40 RPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVD 92
Score = 60.5 bits (140), Expect = 8e-09
Identities = 26/39 (66%), Positives = 33/39 (84%), Gaps = 1/39 (2%)
Frame = +1
Query: 376 KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 489
KD+ +DPA ++K R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 102 KDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 140
Score = 43.2 bits (97), Expect = 0.001
Identities = 23/60 (38%), Positives = 35/60 (58%)
Frame = +2
Query: 119 LVLSGRYAGRKAIVVKNYDEGTSXQAIRACLRRWYRQVPPESAQEDGKE*NPQEVQDKAF 298
LVL+GRY+GRKA++VKN D+GTS + L + P + GK+ + + K+F
Sbjct: 16 LVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSF 75
>BC010026-1|AAH10026.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 92.7 bits (220), Expect = 2e-18
Identities = 42/53 (79%), Positives = 44/53 (83%)
Frame = +3
Query: 192 KPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVD 350
+PY HA VAGIDRYPRKV MGK KI KRSKIK FVKV NYNHLMPTRY+VD
Sbjct: 36 RPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVD 88
Score = 64.1 bits (149), Expect = 7e-10
Identities = 33/71 (46%), Positives = 45/71 (63%)
Frame = +2
Query: 86 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSXQAIRACLRRWYRQVPPESAQEDGKE 265
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTS + L + P + GK+
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 266 *NPQEVQDKAF 298
+ + K+F
Sbjct: 61 KIAKRSKIKSF 71
Score = 60.5 bits (140), Expect = 8e-09
Identities = 26/39 (66%), Positives = 33/39 (84%), Gaps = 1/39 (2%)
Frame = +1
Query: 376 KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 489
KD+ +DPA ++K R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 98 KDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
>BC007273-1|AAH07273.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 92.7 bits (220), Expect = 2e-18
Identities = 42/53 (79%), Positives = 44/53 (83%)
Frame = +3
Query: 192 KPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVD 350
+PY HA VAGIDRYPRKV MGK KI KRSKIK FVKV NYNHLMPTRY+VD
Sbjct: 36 RPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVD 88
Score = 64.1 bits (149), Expect = 7e-10
Identities = 33/71 (46%), Positives = 45/71 (63%)
Frame = +2
Query: 86 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSXQAIRACLRRWYRQVPPESAQEDGKE 265
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTS + L + P + GK+
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 266 *NPQEVQDKAF 298
+ + K+F
Sbjct: 61 KIAKRSKIKSF 71
Score = 60.5 bits (140), Expect = 8e-09
Identities = 26/39 (66%), Positives = 33/39 (84%), Gaps = 1/39 (2%)
Frame = +1
Query: 376 KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 489
KD+ +DPA ++K R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 98 KDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
>BC002588-1|AAH02588.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 92.7 bits (220), Expect = 2e-18
Identities = 42/53 (79%), Positives = 44/53 (83%)
Frame = +3
Query: 192 KPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVD 350
+PY HA VAGIDRYPRKV MGK KI KRSKIK FVKV NYNHLMPTRY+VD
Sbjct: 36 RPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVD 88
Score = 64.1 bits (149), Expect = 7e-10
Identities = 33/71 (46%), Positives = 45/71 (63%)
Frame = +2
Query: 86 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSXQAIRACLRRWYRQVPPESAQEDGKE 265
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTS + L + P + GK+
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 266 *NPQEVQDKAF 298
+ + K+F
Sbjct: 61 KIAKRSKIKSF 71
Score = 60.5 bits (140), Expect = 8e-09
Identities = 26/39 (66%), Positives = 33/39 (84%), Gaps = 1/39 (2%)
Frame = +1
Query: 376 KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 489
KD+ +DPA ++K R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 98 KDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
>BC001700-1|AAH01700.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 92.7 bits (220), Expect = 2e-18
Identities = 42/53 (79%), Positives = 44/53 (83%)
Frame = +3
Query: 192 KPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVD 350
+PY HA VAGIDRYPRKV MGK KI KRSKIK FVKV NYNHLMPTRY+VD
Sbjct: 36 RPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVD 88
Score = 64.1 bits (149), Expect = 7e-10
Identities = 33/71 (46%), Positives = 45/71 (63%)
Frame = +2
Query: 86 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSXQAIRACLRRWYRQVPPESAQEDGKE 265
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTS + L + P + GK+
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 266 *NPQEVQDKAF 298
+ + K+F
Sbjct: 61 KIAKRSKIKSF 71
Score = 60.5 bits (140), Expect = 8e-09
Identities = 26/39 (66%), Positives = 33/39 (84%), Gaps = 1/39 (2%)
Frame = +1
Query: 376 KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 489
KD+ +DPA ++K R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 98 KDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
>AB061851-1|BAB79492.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 92.7 bits (220), Expect = 2e-18
Identities = 42/53 (79%), Positives = 44/53 (83%)
Frame = +3
Query: 192 KPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVD 350
+PY HA VAGIDRYPRKV MGK KI KRSKIK FVKV NYNHLMPTRY+VD
Sbjct: 36 RPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVD 88
Score = 64.1 bits (149), Expect = 7e-10
Identities = 33/71 (46%), Positives = 45/71 (63%)
Frame = +2
Query: 86 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSXQAIRACLRRWYRQVPPESAQEDGKE 265
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTS + L + P + GK+
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 266 *NPQEVQDKAF 298
+ + K+F
Sbjct: 61 KIAKRSKIKSF 71
Score = 60.5 bits (140), Expect = 8e-09
Identities = 26/39 (66%), Positives = 33/39 (84%), Gaps = 1/39 (2%)
Frame = +1
Query: 376 KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 489
KD+ +DPA ++K R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 98 KDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
>U25752-1|AAA93226.1| 40|Homo sapiens ribosomal protein L27
protein.
Length = 40
Score = 60.5 bits (140), Expect = 8e-09
Identities = 26/39 (66%), Positives = 33/39 (84%), Gaps = 1/39 (2%)
Frame = +1
Query: 376 KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 489
KD+ +DPA ++K R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 2 KDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 40
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,940,822
Number of Sequences: 237096
Number of extensions: 1941678
Number of successful extensions: 7248
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7234
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11770329464
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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