Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_O14
         (961 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_1174 - 26696869-26698191                                         31   1.0  
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    31   1.0  
02_05_0686 - 30900748-30902167,30903442-30904742                       29   4.2  

>12_02_1174 - 26696869-26698191
          Length = 440

 Score = 31.5 bits (68), Expect = 1.0
 Identities = 15/39 (38%), Positives = 16/39 (41%)
 Frame = +3

Query: 765 PRPPPRXRVRXXPPSXKXXXXXPXPPXKXXNXXXXPPAP 881
           P PPPR R R  PP  +     P PP         PP P
Sbjct: 125 PPPPPRTRTRVEPP-HRPPPVKPQPPPSLPPPPPPPPPP 162


>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 31.5 bits (68), Expect = 1.0
 Identities = 17/58 (29%), Positives = 20/58 (34%), Gaps = 1/58 (1%)
 Frame = +3

Query: 711  GXXGXPPKXXLGRFSXX-XPRPPPRXRVRXXPPSXKXXXXXPXPPXKXXNXXXXPPAP 881
            G  G PP   +G       P PP   R    PP+       P PP +       PP P
Sbjct: 1144 GIGGVPPPPPVGGLGGPPAPPPPAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTP 1201



 Score = 29.1 bits (62), Expect = 5.5
 Identities = 14/42 (33%), Positives = 14/42 (33%)
 Frame = +1

Query: 718  GXXPXKXPSGAFXXXXXDXPPASGXGXXPLPXKXXXXXPPPP 843
            G  P   P G         PPA   G  P P       PPPP
Sbjct: 1146 GGVPPPPPVGGLGGPPAPPPPAGFRGGTPPPNAHGGVAPPPP 1187


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 16/52 (30%), Positives = 17/52 (32%)
 Frame = +3

Query: 726 PPKXXLGRFSXXXPRPPPRXRVRXXPPSXKXXXXXPXPPXKXXNXXXXPPAP 881
           PPK          P PPP  +    PP  K     P PP         PP P
Sbjct: 331 PPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPP 382


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,268,452
Number of Sequences: 37544
Number of extensions: 260838
Number of successful extensions: 890
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 797
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2776393380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)