Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_O12
         (1047 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_01_0069 - 697811-697876,697956-698166,698265-698359,698448-69...    31   1.5  
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    29   4.6  
06_01_0571 - 4038319-4040877,4040962-4041012                           29   8.1  

>04_01_0069 -
           697811-697876,697956-698166,698265-698359,698448-698513,
           698595-698643,698720-698770,698856-698908,699263-699331,
           699874-699928,700011-700099,700217-700302,700376-700432,
           700575-700716,701637-702032
          Length = 494

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 18/67 (26%), Positives = 20/67 (29%)
 Frame = +1

Query: 733 FXRLXSKRPXXXPPXXSTFXTPPXXGRAGXPLPPSPSXXVXXXGXPXXXGSXADXTXXXG 912
           F    S RP   PP  +T   PP    A  P  P P         P    + A  T    
Sbjct: 61  FRAAASSRPPRPPPPSTTTAPPPPAAPAVTPARPPPQQPAVAVAAPPPATTMATATEEVA 120

Query: 913 CPGRXXP 933
            P    P
Sbjct: 121 APATGNP 127


>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 21/71 (29%), Positives = 22/71 (30%), Gaps = 1/71 (1%)
 Frame = +1

Query: 757  PXXXPPXXSTFXTPPXXGRAG-XPLPPSPSXXVXXXGXPXXXGSXADXTXXXGCPGRXXP 933
            P   PP      TPP     G  P PP P       G P   G+ A      G PG   P
Sbjct: 1161 PAPPPPAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPA-PPMPPGVPGGPPP 1219

Query: 934  GXGHXAXXTXP 966
              G       P
Sbjct: 1220 PPGGRGLPAPP 1230


>06_01_0571 - 4038319-4040877,4040962-4041012
          Length = 869

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = -3

Query: 280 GGAXTLSPGKTKPXPGPVWVKLKSILYIIGICKVSVMLKLSVLFF 146
           G   T+S  + KP P P   KL  I ++ G+   + M  ++VLFF
Sbjct: 687 GTIMTISKDRVKPSPTPDCWKLNEI-FLTGVVLGTYMALVTVLFF 730


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,550,585
Number of Sequences: 37544
Number of extensions: 296300
Number of successful extensions: 793
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 782
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3094456940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)