Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_O09
(896 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 27 0.31
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 27 0.31
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 24 1.6
AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase pr... 24 2.2
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 23 2.9
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 23 2.9
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 23 5.0
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 22 6.6
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 22 6.6
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 22 8.7
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 22 8.7
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 22 8.7
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 26.6 bits (56), Expect = 0.31
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -1
Query: 476 SHVLSCVITLILWITVLPPLSELIPLAA 393
S +LS V+ L+L +LPP S ++PL A
Sbjct: 270 SILLSLVVFLLLVSKILPPTSLVLPLIA 297
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 26.6 bits (56), Expect = 0.31
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +3
Query: 588 WRNPTGL*RYQAFPPGKLPRALSWFRPCRLPDTCPPF 698
+ NP RYQ P GK+ R L RL D P F
Sbjct: 91 YENPDEEKRYQEHPNGKILRELQTDYDRRLHDNSPSF 127
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 24.2 bits (50), Expect = 1.6
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -1
Query: 497 GLLLAFCSHVL-SCVITLILWITVLPPLSELIPL 399
G ++ CS +L S + +L ++PP S IPL
Sbjct: 278 GEKVSLCSSILLSLTVFFLLLAEIIPPTSLAIPL 311
>AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase
protein.
Length = 342
Score = 23.8 bits (49), Expect = 2.2
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +3
Query: 777 WAVCTNPPFSPTXAP 821
W V +PP+SP AP
Sbjct: 264 WDVLPHPPYSPDLAP 278
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 23.4 bits (48), Expect = 2.9
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 619 RRFPLXSSLVRSPGSDPAAYRIPVRLSPFG 708
R+ P+ + + R PG +P R+P LS G
Sbjct: 358 RKRPMHNVVYR-PGENPVTQRLPAVLSRIG 386
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 23.4 bits (48), Expect = 2.9
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 580 VRGGETRQDYKDTRRFPLXSSLVRSPGSD 666
V ET ++ DT R P+ SL +SP +D
Sbjct: 171 VEENETYDEF-DTIRIPIVRSLSKSPPND 198
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 22.6 bits (46), Expect = 5.0
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = -1
Query: 476 SHVLSCVITLILWITVLPPLSELIPL 399
S +LS + +L ++PP S ++PL
Sbjct: 277 SILLSLTVFFLLLAEIIPPTSLVVPL 302
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 22.2 bits (45), Expect = 6.6
Identities = 13/35 (37%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = -3
Query: 156 SLHS-SCGLSKTHQCILSCLDPN*PHQXKGRSRGP 55
SLH LS +L C D + P K S GP
Sbjct: 35 SLHFVRASLSNLDMSVLECADRSAPRVKKTASAGP 69
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 22.2 bits (45), Expect = 6.6
Identities = 13/35 (37%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = -3
Query: 156 SLHS-SCGLSKTHQCILSCLDPN*PHQXKGRSRGP 55
SLH LS +L C D + P K S GP
Sbjct: 125 SLHFVRASLSNLDMSVLECADRSAPRVKKTASAGP 159
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.8 bits (44), Expect = 8.7
Identities = 8/26 (30%), Positives = 17/26 (65%)
Frame = -1
Query: 476 SHVLSCVITLILWITVLPPLSELIPL 399
S ++S + +L + ++PP S ++PL
Sbjct: 281 SILISLHVFFLLVVEIIPPTSLVVPL 306
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.8 bits (44), Expect = 8.7
Identities = 8/26 (30%), Positives = 17/26 (65%)
Frame = -1
Query: 476 SHVLSCVITLILWITVLPPLSELIPL 399
S ++S + +L + ++PP S ++PL
Sbjct: 281 SILISLHVFFLLVVEIIPPTSLVVPL 306
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 21.8 bits (44), Expect = 8.7
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -1
Query: 476 SHVLSCVITLILWITVLPPLSELIPL 399
S +LS + +L ++PP S +PL
Sbjct: 273 SILLSLTVFFLLLAEIIPPTSLTVPL 298
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 232,670
Number of Sequences: 438
Number of extensions: 5476
Number of successful extensions: 21
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29025360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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