Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_O07
(896 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC24C9.02c |||cytochrome c1 heme lyase|Schizosaccharomyces pom... 146 5e-36
SPBC26H8.12 |||cytochrome c heme lyase|Schizosaccharomyces pombe... 107 2e-24
SPCC188.11 |prp45|cwf13, snw1, SPCC584.08|transcriptional regula... 28 1.6
SPBC21H7.02 |taf10||transcription factor TFIID complex subunit T... 27 3.6
SPAC1952.11c |ure2||urease |Schizosaccharomyces pombe|chr 1|||Ma... 27 3.6
SPAC3H8.06 |aur1||inositol phosphorylceramide synthase |Schizosa... 27 3.6
SPAC1834.05 |alg9||mannosyltransferase complex subunit Alg9 |Sch... 26 8.4
>SPAC24C9.02c |||cytochrome c1 heme lyase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 216
Score = 146 bits (353), Expect = 5e-36
Identities = 72/159 (45%), Positives = 102/159 (64%), Gaps = 4/159 (2%)
Frame = +3
Query: 357 PFTLPTNRQVSSIPRAMPD---GSTEFWVYPSQQMFWNAMLRKGWRWKDEDIKPKDMDDI 527
P LPT R++S+IP+ + + G E W+YPSQQMF++AM RK W + P+DM I
Sbjct: 42 PTMLPTEREISTIPKVVTESDSGKEEKWIYPSQQMFFDAMKRKNW-----NPHPEDMKTI 96
Query: 528 IRIHNANNEQAWQEVLKWE-ALHAKECGHPXLKSFGGKATQYSPRARIRSWAWV*VTFDR 704
+ IHNA NE+AWQ++L+WE +++CG P L+ F G + +P+ARI + FDR
Sbjct: 97 VPIHNAVNERAWQDILQWEQGWGSEKCGGPKLERFDGNVKKLTPKARILNLLGYNKPFDR 156
Query: 705 HDWIVDRCGXXVRYIIDYYDGGEVDNKYQFAMLDVRPAI 821
HDW+V+RCG V Y+ID+Y+G V N LDVRP +
Sbjct: 157 HDWLVNRCGRKVAYVIDFYNGPTV-NGTPSIYLDVRPKL 194
>SPBC26H8.12 |||cytochrome c heme lyase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 377
Score = 107 bits (257), Expect = 2e-24
Identities = 75/180 (41%), Positives = 94/180 (52%), Gaps = 11/180 (6%)
Frame = +3
Query: 351 DQPFTLPTNRQVSSIPRAMPDGSTEFWVYPSQQMFWNAMLRKGWRWKDEDIKPKDMDDII 530
DQ L T R SSIP+ DG W YPS Q +NAM RKG+R E++ ++
Sbjct: 199 DQVVGLETTRTTSSIPKV--DGKN--WEYPSPQQMYNAMWRKGYRDSGENVPI-----MV 249
Query: 531 RIHNANNEQAWQEVLKWEALHAKECGHPXLKSFGGKATQYSPRA-------RIRS--WAW 683
++HN NE AW E+ WE A E P L F G A + +PRA RI W
Sbjct: 250 QVHNFLNEGAWSEIKAWER-EAGENTEPKLLRFEGNANKRTPRALWYMMLGRINPNRWGS 308
Query: 684 V*VTFDRHDWIVDRC-GXXVRYIIDYYDGGE-VDNKYQFAMLDVRPAIDSVENVGTE*KY 857
FDRHDW V R VRY+IDYY+ + D K F+ LDVRPA+DS E+V K+
Sbjct: 309 GEGPFDRHDWYVQRKDNSIVRYVIDYYEAPDSADGKPVFS-LDVRPAVDSFESVALRWKH 367
Score = 28.3 bits (60), Expect = 1.6
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +3
Query: 216 ANPPPECPMHNKTEQ 260
ANPPP CPMH + +
Sbjct: 82 ANPPPGCPMHKASNE 96
>SPCC188.11 |prp45|cwf13, snw1, SPCC584.08|transcriptional regulator
Prp45|Schizosaccharomyces pombe|chr 3|||Manual
Length = 557
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +3
Query: 156 QMGNKVSAEAHVNIKTGEKDANPPPECPMHNKTEQKPKVSECPVQH 293
QMG +S + + + T E+D PP+ H K + P PV H
Sbjct: 191 QMGQALSKQRIIKMVTAEQDPMEPPKF-RHKKVPRGPPSPPPPVLH 235
>SPBC21H7.02 |taf10||transcription factor TFIID complex subunit
Taf10 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 215
Score = 27.1 bits (57), Expect = 3.6
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +3
Query: 192 NIKTGEKDANPPPECPMHNKTEQKPKVSECPVQHGND 302
N+ TG+ A E P H E PK + +HG++
Sbjct: 39 NLPTGDNLAPMSVESPAHLNNEDSPKSDDSRERHGSN 75
>SPAC1952.11c |ure2||urease |Schizosaccharomyces pombe|chr
1|||Manual
Length = 835
Score = 27.1 bits (57), Expect = 3.6
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +1
Query: 298 MISIHST*CLQLTNNLHQI--SHSPCPQTDKFPLFLEQCLMAQLNSGFIQV 444
+I+IH C N H + S P P + FPL E+ + + GF++V
Sbjct: 91 LITIHDPICTTDGNLEHALYGSFLPTPSQELFPLEEEKLYAPENSPGFVEV 141
>SPAC3H8.06 |aur1||inositol phosphorylceramide synthase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 422
Score = 27.1 bits (57), Expect = 3.6
Identities = 13/66 (19%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = -1
Query: 359 WLIWCRLLVSWRHHVEWID--IISMLYWTFRNLWLLLRFVMHRALRWRIRIFLSGFYINV 186
WL WC + ++ + V+ + ++++ + F L + + LRW + G ++
Sbjct: 283 WLCWCTMYLTHHYFVDLVGGMCLAIICFVFAQKLRLPQLQTGKILRWEYEFVIHGHGLSE 342
Query: 185 SLSRHL 168
S L
Sbjct: 343 KTSNSL 348
>SPAC1834.05 |alg9||mannosyltransferase complex subunit Alg9
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 577
Score = 25.8 bits (54), Expect = 8.4
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 609 HPXLKSFGGKATQYSPRARIRSWAWV 686
H L +G + +YSP IRSW ++
Sbjct: 48 HYLLYGYGLQTWEYSPEYAIRSWFYI 73
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,735,092
Number of Sequences: 5004
Number of extensions: 82119
Number of successful extensions: 201
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 195
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 452494940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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