Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_O07
         (896 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0764 + 10990220-10992410,10992809-10993616,10994734-109949...    33   0.31 
02_05_1120 + 34257504-34258294,34258483-34258571,34258616-342587...    28   8.8  
02_01_0138 + 999809-999821,1000456-1001341,1001424-1003221,10037...    28   8.8  

>03_02_0764 +
           10990220-10992410,10992809-10993616,10994734-10994968,
           10995028-10995169,10997365-10997444,10997636-10997776
          Length = 1198

 Score = 33.1 bits (72), Expect = 0.31
 Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
 Frame = +3

Query: 414 GSTEFWVYPSQQMFW-NAMLRKGWRWKDEDIKPKDMDDIIRIHNANNEQAWQEVLKWEAL 590
           G    ++ PS  +FW  +   K  +W      P+D DD  R+H  ++ +A+ EV+K  +L
Sbjct: 547 GMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSL 606


>02_05_1120 +
           34257504-34258294,34258483-34258571,34258616-34258713,
           34259269-34259292,34259314-34259404,34259761-34259813,
           34259933-34260151
          Length = 454

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 19/68 (27%), Positives = 28/68 (41%)
 Frame = +3

Query: 222 PPPECPMHNKTEQKPKVSECPVQHGNDINPFXXXXXXXXXXXXDQPFTLPTNRQVSSIPR 401
           PPP  P +++ +  PK SE     G   NP               P  LP +R++ + P 
Sbjct: 31  PPPPPPPNDRDDASPKPSE-----GEGRNPAASLFQDLRDRLMSTPSHLP-SRRIPTAPP 84

Query: 402 AMPDGSTE 425
             P G+ E
Sbjct: 85  PRPSGNAE 92


>02_01_0138 +
           999809-999821,1000456-1001341,1001424-1003221,
           1003716-1003805,1004034-1004111,1004513-1004518,
           1004849-1004958,1005174-1005369
          Length = 1058

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +1

Query: 325 LQLTNNLHQISHSPCPQTDKFPLFLEQCLMAQLNSGFIQVNK 450
           ++LT+ +  +    CPQ ++F LF      A+  S F  +NK
Sbjct: 249 IELTSRIRVLMVKDCPQLNEFVLFHRDHFHAEQKSWFPSLNK 290


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,258,398
Number of Sequences: 37544
Number of extensions: 552715
Number of successful extensions: 1400
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1359
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1400
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)