Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_O07
(896 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U36787-1|AAB19007.1| 268|Homo sapiens holocytochrome c-type syn... 250 7e-66
BC095455-1|AAH95455.1| 268|Homo sapiens holocytochrome c syntha... 250 7e-66
BC001691-1|AAH01691.1| 268|Homo sapiens HCCS protein protein. 250 7e-66
AF053015-1|AAC35274.1| 268|Homo sapiens putative holocytochrome... 250 7e-66
AB065616-1|BAC05843.1| 312|Homo sapiens seven transmembrane hel... 30 9.9
>U36787-1|AAB19007.1| 268|Homo sapiens holocytochrome c-type
synthetase protein.
Length = 268
Score = 250 bits (611), Expect = 7e-66
Identities = 120/207 (57%), Positives = 145/207 (70%), Gaps = 6/207 (2%)
Frame = +3
Query: 237 PMHNKTEQKPKVSECPV-----QHGNDINPFXXXXXXXXXXXXDQPFTLPTNRQVSSIPR 401
P H E+ + ECP+ ++ +++P DQPF L T R+ SSIPR
Sbjct: 54 PAHQ--ERAYEYVECPIRGTAAENKENLDPSNLMPPPNQTPAPDQPFALSTVREESSIPR 111
Query: 402 AMPDGSTEFWVYPSQQMFWNAMLRKGWRWKDEDIKPKDMDDIIRIHNANNEQAWQEVLKW 581
A S + WVYPS+QMFWNAML+KGW+WKDEDI KDM +IIRIHN NNEQAW+E+LKW
Sbjct: 112 A---DSEKKWVYPSEQMFWNAMLKKGWKWKDEDISQKDMYNIIRIHNQNNEQAWKEILKW 168
Query: 582 EALHAKECG-HPXLKSFGGKATQYSPRARIRSWAWV*VTFDRHDWIVDRCGXXVRYIIDY 758
EALHA EC P L FGGKA +YSPRARIRSW + FDRHDWI++RCG VRY+IDY
Sbjct: 169 EALHAAECPCGPSLIRFGGKAKEYSPRARIRSWMGYELPFDRHDWIINRCGTEVRYVIDY 228
Query: 759 YDGGEVDNKYQFAMLDVRPAIDSVENV 839
YDGGEV+ YQF +LDVRPA+DS+ V
Sbjct: 229 YDGGEVNKDYQFTILDVRPALDSLSAV 255
>BC095455-1|AAH95455.1| 268|Homo sapiens holocytochrome c synthase
(cytochrome c heme-lyase) protein.
Length = 268
Score = 250 bits (611), Expect = 7e-66
Identities = 120/207 (57%), Positives = 145/207 (70%), Gaps = 6/207 (2%)
Frame = +3
Query: 237 PMHNKTEQKPKVSECPV-----QHGNDINPFXXXXXXXXXXXXDQPFTLPTNRQVSSIPR 401
P H E+ + ECP+ ++ +++P DQPF L T R+ SSIPR
Sbjct: 54 PAHQ--ERAYEYVECPIRGTAAENKENLDPSNLMPPPNQTPAPDQPFALSTVREESSIPR 111
Query: 402 AMPDGSTEFWVYPSQQMFWNAMLRKGWRWKDEDIKPKDMDDIIRIHNANNEQAWQEVLKW 581
A S + WVYPS+QMFWNAML+KGW+WKDEDI KDM +IIRIHN NNEQAW+E+LKW
Sbjct: 112 A---DSEKKWVYPSEQMFWNAMLKKGWKWKDEDISQKDMYNIIRIHNQNNEQAWKEILKW 168
Query: 582 EALHAKECG-HPXLKSFGGKATQYSPRARIRSWAWV*VTFDRHDWIVDRCGXXVRYIIDY 758
EALHA EC P L FGGKA +YSPRARIRSW + FDRHDWI++RCG VRY+IDY
Sbjct: 169 EALHAAECPCGPSLIRFGGKAKEYSPRARIRSWMGYELPFDRHDWIINRCGTEVRYVIDY 228
Query: 759 YDGGEVDNKYQFAMLDVRPAIDSVENV 839
YDGGEV+ YQF +LDVRPA+DS+ V
Sbjct: 229 YDGGEVNKDYQFTILDVRPALDSLSAV 255
>BC001691-1|AAH01691.1| 268|Homo sapiens HCCS protein protein.
Length = 268
Score = 250 bits (611), Expect = 7e-66
Identities = 120/207 (57%), Positives = 145/207 (70%), Gaps = 6/207 (2%)
Frame = +3
Query: 237 PMHNKTEQKPKVSECPV-----QHGNDINPFXXXXXXXXXXXXDQPFTLPTNRQVSSIPR 401
P H E+ + ECP+ ++ +++P DQPF L T R+ SSIPR
Sbjct: 54 PAHQ--ERAYEYVECPIRGTAAENKENLDPSNLMPPPNQTPAPDQPFALSTVREESSIPR 111
Query: 402 AMPDGSTEFWVYPSQQMFWNAMLRKGWRWKDEDIKPKDMDDIIRIHNANNEQAWQEVLKW 581
A S + WVYPS+QMFWNAML+KGW+WKDEDI KDM +IIRIHN NNEQAW+E+LKW
Sbjct: 112 A---DSEKKWVYPSEQMFWNAMLKKGWKWKDEDISQKDMYNIIRIHNQNNEQAWKEILKW 168
Query: 582 EALHAKECG-HPXLKSFGGKATQYSPRARIRSWAWV*VTFDRHDWIVDRCGXXVRYIIDY 758
EALHA EC P L FGGKA +YSPRARIRSW + FDRHDWI++RCG VRY+IDY
Sbjct: 169 EALHAAECPCGPSLIRFGGKAKEYSPRARIRSWMGYELPFDRHDWIINRCGTEVRYVIDY 228
Query: 759 YDGGEVDNKYQFAMLDVRPAIDSVENV 839
YDGGEV+ YQF +LDVRPA+DS+ V
Sbjct: 229 YDGGEVNKDYQFTILDVRPALDSLSAV 255
>AF053015-1|AAC35274.1| 268|Homo sapiens putative holocytochrome
c-type synthetase protein.
Length = 268
Score = 250 bits (611), Expect = 7e-66
Identities = 120/207 (57%), Positives = 145/207 (70%), Gaps = 6/207 (2%)
Frame = +3
Query: 237 PMHNKTEQKPKVSECPV-----QHGNDINPFXXXXXXXXXXXXDQPFTLPTNRQVSSIPR 401
P H E+ + ECP+ ++ +++P DQPF L T R+ SSIPR
Sbjct: 54 PAHQ--ERAYEYVECPIRGTAAENKENLDPSNLMPPPNQTPAPDQPFALSTVREESSIPR 111
Query: 402 AMPDGSTEFWVYPSQQMFWNAMLRKGWRWKDEDIKPKDMDDIIRIHNANNEQAWQEVLKW 581
A S + WVYPS+QMFWNAML+KGW+WKDEDI KDM +IIRIHN NNEQAW+E+LKW
Sbjct: 112 A---DSEKKWVYPSEQMFWNAMLKKGWKWKDEDISQKDMYNIIRIHNQNNEQAWKEILKW 168
Query: 582 EALHAKECG-HPXLKSFGGKATQYSPRARIRSWAWV*VTFDRHDWIVDRCGXXVRYIIDY 758
EALHA EC P L FGGKA +YSPRARIRSW + FDRHDWI++RCG VRY+IDY
Sbjct: 169 EALHAAECPCGPSLIRFGGKAKEYSPRARIRSWMGYELPFDRHDWIINRCGTEVRYVIDY 228
Query: 759 YDGGEVDNKYQFAMLDVRPAIDSVENV 839
YDGGEV+ YQF +LDVRPA+DS+ V
Sbjct: 229 YDGGEVNKDYQFTILDVRPALDSLSAV 255
>AB065616-1|BAC05843.1| 312|Homo sapiens seven transmembrane helix
receptor protein.
Length = 312
Score = 30.3 bits (65), Expect = 9.9
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
Frame = -2
Query: 346 AGCWLAG---GIMLNGL-ISFPCCTGHSETFGFCSV 251
+GCW G G ML + +SFP C H FC V
Sbjct: 146 SGCWFVGSVDGFMLTPIAMSFPFCRSHEIQHFFCEV 181
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,141,629
Number of Sequences: 237096
Number of extensions: 2923595
Number of successful extensions: 6048
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6035
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11548247776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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