Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_O07
         (896 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118889-1|AAM50749.1|  281|Drosophila melanogaster HL08191p pro...   319   4e-87
AE014297-3084|AAF55946.1|  281|Drosophila melanogaster CG6022-PA...   319   4e-87
BT023341-1|AAY55757.1|  109|Drosophila melanogaster IP02167p pro...    29   8.6  

>AY118889-1|AAM50749.1|  281|Drosophila melanogaster HL08191p
           protein.
          Length = 281

 Score =  319 bits (783), Expect = 4e-87
 Identities = 147/219 (67%), Positives = 162/219 (73%), Gaps = 13/219 (5%)
 Frame = +3

Query: 222 PPPECPMHNK---------TEQKPKV---SECPVQHGN-DINPFXXXXXXXXXXXXDQPF 362
           PPPECPMH K             PK+   SECPVQH N D+NP             DQPF
Sbjct: 31  PPPECPMHQKHGDAKSASAVPPHPKMQAASECPVQHDNSDVNPLNMMPPANQQPAADQPF 90

Query: 363 TLPTNRQVSSIPRAMPDGSTEFWVYPSQQMFWNAMLRKGWRWKDEDIKPKDMDDIIRIHN 542
            LPT+RQ S+IP+   DGS +FW YPSQQMFWNAMLRKGWRWK ED+  KDM DIIRIHN
Sbjct: 91  PLPTDRQTSTIPKVTEDGSVQFWQYPSQQMFWNAMLRKGWRWKTEDVSQKDMGDIIRIHN 150

Query: 543 ANNEQAWQEVLKWEALHAKECGHPXLKSFGGKATQYSPRARIRSWAWV*VTFDRHDWIVD 722
           ANNEQAWQEVLKWEALHAKECG+P LKSFGGKA  +SPRAR RSW    + FDRHDWIVD
Sbjct: 151 ANNEQAWQEVLKWEALHAKECGNPRLKSFGGKAKDFSPRARFRSWLGYELPFDRHDWIVD 210

Query: 723 RCGXXVRYIIDYYDGGEVDNKYQFAMLDVRPAIDSVENV 839
           RCG  VRY+IDYYDGG VD  Y+FA+LDVRPA+DSV+NV
Sbjct: 211 RCGKDVRYVIDYYDGGLVDKDYRFALLDVRPAMDSVDNV 249


>AE014297-3084|AAF55946.1|  281|Drosophila melanogaster CG6022-PA
           protein.
          Length = 281

 Score =  319 bits (783), Expect = 4e-87
 Identities = 147/219 (67%), Positives = 162/219 (73%), Gaps = 13/219 (5%)
 Frame = +3

Query: 222 PPPECPMHNK---------TEQKPKV---SECPVQHGN-DINPFXXXXXXXXXXXXDQPF 362
           PPPECPMH K             PK+   SECPVQH N D+NP             DQPF
Sbjct: 31  PPPECPMHQKHGDAKSASAVPPHPKMQAASECPVQHDNSDVNPLNMMPPANQQPAADQPF 90

Query: 363 TLPTNRQVSSIPRAMPDGSTEFWVYPSQQMFWNAMLRKGWRWKDEDIKPKDMDDIIRIHN 542
            LPT+RQ S+IP+   DGS +FW YPSQQMFWNAMLRKGWRWK ED+  KDM DIIRIHN
Sbjct: 91  PLPTDRQTSTIPKVTEDGSVQFWQYPSQQMFWNAMLRKGWRWKTEDVSQKDMGDIIRIHN 150

Query: 543 ANNEQAWQEVLKWEALHAKECGHPXLKSFGGKATQYSPRARIRSWAWV*VTFDRHDWIVD 722
           ANNEQAWQEVLKWEALHAKECG+P LKSFGGKA  +SPRAR RSW    + FDRHDWIVD
Sbjct: 151 ANNEQAWQEVLKWEALHAKECGNPRLKSFGGKAKDFSPRARFRSWLGYELPFDRHDWIVD 210

Query: 723 RCGXXVRYIIDYYDGGEVDNKYQFAMLDVRPAIDSVENV 839
           RCG  VRY+IDYYDGG VD  Y+FA+LDVRPA+DSV+NV
Sbjct: 211 RCGKDVRYVIDYYDGGLVDKDYRFALLDVRPAMDSVDNV 249


>BT023341-1|AAY55757.1|  109|Drosophila melanogaster IP02167p
           protein.
          Length = 109

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 5/50 (10%)
 Frame = -1

Query: 359 WLIWC--RLLVSWRH-HVEWIDI--ISMLYWTFRNLWLLLRFVMHRALRW 225
           W +W   R+L+ W      W  +  + +L WT   LW LLR +  + LRW
Sbjct: 31  WTLWIVLRILLLWSLLWTLWTPMWAVRILLWTLWTLWTLLRTIW-QLLRW 79


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,400,650
Number of Sequences: 53049
Number of extensions: 919622
Number of successful extensions: 2155
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2151
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4362070239
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)