Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_O03
(881 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 29 0.66
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 28 1.5
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 28 1.5
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 28 2.0
SPCC1919.12c |||aminopeptidase |Schizosaccharomyces pombe|chr 3|... 27 4.7
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 26 8.2
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 26 8.2
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 29.5 bits (63), Expect = 0.66
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
Frame = -3
Query: 684 FLDCATMASVSQRPSGPKKAATPAQLISVMSLVEV------TMSYFVSFHCN*ISTSGSR 523
+L +++ S S PS + + +S S+ T S S + ++S S
Sbjct: 209 YLSSSSVVSSSSSPSSSSSSTLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSS 268
Query: 522 STPLFSSSSAIDSAPETVSPCLSRKS 445
S+ + SSSS+ S+P + S +S S
Sbjct: 269 SSSIISSSSSSSSSPTSTSSTISSSS 294
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 28.3 bits (60), Expect = 1.5
Identities = 24/81 (29%), Positives = 43/81 (53%)
Frame = -3
Query: 663 ASVSQRPSGPKKAATPAQLISVMSLVEVTMSYFVSFHCN*ISTSGSRSTPLFSSSSAIDS 484
+S++ SG ++ P+ SV S++ + S S + IS+S + ST FSS+S S
Sbjct: 555 SSITTISSGISSSSIPSTFSSVSSILSSSTSSPSSTSLS-ISSSSTSST--FSSAST--S 609
Query: 483 APETVSPCLSRKSPVRAGK*P 421
+P ++S +S S + + P
Sbjct: 610 SPSSISSSISSSSTILSSPTP 630
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 28.3 bits (60), Expect = 1.5
Identities = 21/64 (32%), Positives = 33/64 (51%)
Frame = -3
Query: 540 STSGSRSTPLFSSSSAIDSAPETVSPCLSRKSPVRAGK*PMVILNFLWASEGPASKPSAA 361
ST+ + STP+ SSS S P T S L+ +P+ + +LN S P + +A
Sbjct: 1755 STALNTSTPITSSSVLNSSTPITSSTALNTSTPITSSS----VLN----SSTPITSSTAL 1806
Query: 360 STNT 349
+T+T
Sbjct: 1807 NTST 1810
Score = 27.9 bits (59), Expect = 2.0
Identities = 21/64 (32%), Positives = 32/64 (50%)
Frame = -3
Query: 540 STSGSRSTPLFSSSSAIDSAPETVSPCLSRKSPVRAGK*PMVILNFLWASEGPASKPSAA 361
ST + STP+ SSS S P T S L+ +P+ + +LN S P + +A
Sbjct: 1563 STVVNTSTPITSSSVVNSSTPITSSTALNTSTPITSSS----VLN----SSTPITSSTAL 1614
Query: 360 STNT 349
+T+T
Sbjct: 1615 NTST 1618
Score = 27.1 bits (57), Expect = 3.5
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = -3
Query: 540 STSGSRSTPLFSSSSAIDSAPETVSPCLSRKSPVRAGK*PMVILNFLWASEGPASKPSAA 361
ST+ + STP+ SSS S P T S L+ +P+ + +S +S P +
Sbjct: 627 STALNTSTPITSSSVLNSSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITS 686
Query: 360 ST--NTRAP 340
ST NT P
Sbjct: 687 STALNTSTP 695
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -3
Query: 540 STSGSRSTPLFSSSSAIDSAPETVSPCLSRKSPV 439
ST+ + STP+ SSS S P T S L+ +P+
Sbjct: 663 STALNTSTPITSSSVLNSSTPITSSTALNTSTPI 696
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -3
Query: 540 STSGSRSTPLFSSSSAIDSAPETVSPCLSRKSPV 439
ST+ + STP+ SSS S P T S L+ +P+
Sbjct: 711 STALNTSTPITSSSVLNSSTPITSSTALNTSTPI 744
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -3
Query: 540 STSGSRSTPLFSSSSAIDSAPETVSPCLSRKSPV 439
ST+ + STP+ SSS S P T S L+ +P+
Sbjct: 1587 STALNTSTPITSSSVLNSSTPITSSTALNTSTPI 1620
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -3
Query: 540 STSGSRSTPLFSSSSAIDSAPETVSPCLSRKSPV 439
ST+ + STP+ SSS S P T S L+ +P+
Sbjct: 1779 STALNTSTPITSSSVLNSSTPITSSTALNTSTPI 1812
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -3
Query: 540 STSGSRSTPLFSSSSAIDSAPETVSPCLSRKSPV 439
ST+ + STP+ SSS S P T S L+ +P+
Sbjct: 1851 STALNTSTPITSSSVLNSSTPITSSTALNTSTPI 1884
Score = 27.1 bits (57), Expect = 3.5
Identities = 21/64 (32%), Positives = 31/64 (48%)
Frame = -3
Query: 540 STSGSRSTPLFSSSSAIDSAPETVSPCLSRKSPVRAGK*PMVILNFLWASEGPASKPSAA 361
ST + STP+ SSS S P T S L+ +P+ + +LN S P + S
Sbjct: 1947 STVVNSSTPITSSSVLNSSTPITSSTALNTSTPITSSS----VLN----SSTPITSSSVL 1998
Query: 360 STNT 349
+T+T
Sbjct: 1999 NTST 2002
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -3
Query: 540 STSGSRSTPLFSSSSAIDSAPETVSPCLSRKSPV 439
ST+ + STP+ SSS S P T S L+ +P+
Sbjct: 2043 STALNTSTPITSSSVLNSSTPITSSTALNTSTPI 2076
Score = 27.1 bits (57), Expect = 3.5
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Frame = -3
Query: 624 ATPAQLISVM-SLVEVTMSYFVSFHCN*ISTSG-SRSTPLFSSSSAIDSAPETVSPCLSR 451
+TP SV+ S +T S V+ + S+S + STP+ SSS S P T S ++
Sbjct: 2397 STPITSSSVLNSSTPITSSTVVNTSTSITSSSVLNSSTPITSSSVLNSSTPITSSTVVNS 2456
Query: 450 KSPVRAGK*PMVILNFLWASEGPASKPSAASTNT 349
+P+ + +LN S P + +A +T+T
Sbjct: 2457 STPITSSS----VLN----SSTPITSSTALNTST 2482
Score = 27.1 bits (57), Expect = 3.5
Identities = 21/64 (32%), Positives = 32/64 (50%)
Frame = -3
Query: 540 STSGSRSTPLFSSSSAIDSAPETVSPCLSRKSPVRAGK*PMVILNFLWASEGPASKPSAA 361
ST + STP+ SSS S P T S L+ +P+ + +LN S P + +A
Sbjct: 2823 STVLNSSTPITSSSVLNSSTPITSSTALNTSTPITSSS----VLN----SSTPITSSTAL 2874
Query: 360 STNT 349
+T+T
Sbjct: 2875 NTST 2878
Score = 26.6 bits (56), Expect = 4.7
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -3
Query: 540 STSGSRSTPLFSSSSAIDSAPETVSPCLSRKSPV 439
ST+ + STP+ SSS S P T S L+ +P+
Sbjct: 447 STALNTSTPITSSSVLNSSTPITSSSVLNSSTPI 480
Score = 26.6 bits (56), Expect = 4.7
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -3
Query: 540 STSGSRSTPLFSSSSAIDSAPETVSPCLSRKSPV 439
ST+ + STP+ SSS S P T S L+ +P+
Sbjct: 735 STALNTSTPITSSSVLNSSTPITSSSILNSSTPI 768
Score = 26.6 bits (56), Expect = 4.7
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -3
Query: 540 STSGSRSTPLFSSSSAIDSAPETVSPCLSRKSPV 439
ST+ + STP+ SSS S P T S L+ +P+
Sbjct: 975 STALNTSTPITSSSVLNSSTPITSSSVLNTSTPI 1008
Score = 26.6 bits (56), Expect = 4.7
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -3
Query: 540 STSGSRSTPLFSSSSAIDSAPETVSPCLSRKSPV 439
ST+ + STP+ SSS S P T S L+ +P+
Sbjct: 1071 STALNTSTPITSSSVLNSSTPITSSTVLNSSTPI 1104
Score = 26.6 bits (56), Expect = 4.7
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Frame = -3
Query: 540 STSGSRSTPLFSSSSAIDSAPETVSPCLSRKSPVRAGK*PMVILNFLWASEGPASKPSAA 361
ST + STP+ SSS S P T S L+ +P+ + +S +S P +
Sbjct: 1527 STVLNTSTPITSSSVLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSSVVNSSTPITS 1586
Query: 360 ST--NTRAP 340
ST NT P
Sbjct: 1587 STALNTSTP 1595
Score = 26.6 bits (56), Expect = 4.7
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -3
Query: 540 STSGSRSTPLFSSSSAIDSAPETVSPCLSRKSPV 439
ST+ + STP+ SSS S P T S L+ +P+
Sbjct: 1611 STALNTSTPITSSSVLNSSTPITSSTVLNSSTPI 1644
Score = 26.6 bits (56), Expect = 4.7
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -3
Query: 540 STSGSRSTPLFSSSSAIDSAPETVSPCLSRKSPV 439
ST+ + STP+ SSS S P T S L+ +P+
Sbjct: 1875 STALNTSTPITSSSVLNSSTPITSSTVLNSSTPI 1908
Score = 26.6 bits (56), Expect = 4.7
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -3
Query: 540 STSGSRSTPLFSSSSAIDSAPETVSPCLSRKSPV 439
ST+ + STP+ SSS S P T S L+ +P+
Sbjct: 1911 STALNTSTPITSSSVLNSSTPITSSSVLNSSTPI 1944
Score = 26.6 bits (56), Expect = 4.7
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -3
Query: 540 STSGSRSTPLFSSSSAIDSAPETVSPCLSRKSPV 439
ST+ + STP+ SSS S P T S L+ +P+
Sbjct: 1971 STALNTSTPITSSSVLNSSTPITSSSVLNTSTPI 2004
Score = 26.6 bits (56), Expect = 4.7
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -3
Query: 540 STSGSRSTPLFSSSSAIDSAPETVSPCLSRKSPV 439
ST+ + STP+ SSS S P T S L+ +P+
Sbjct: 2067 STALNTSTPITSSSVLNSSTPITSSTVLNSSTPI 2100
Score = 26.6 bits (56), Expect = 4.7
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -3
Query: 540 STSGSRSTPLFSSSSAIDSAPETVSPCLSRKSPV 439
ST+ + STP+ SSS S P T S L+ +P+
Sbjct: 2103 STALNTSTPITSSSVLNSSTPITSSSVLNSSTPI 2136
Score = 26.2 bits (55), Expect = 6.2
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -3
Query: 540 STSGSRSTPLFSSSSAIDSAPETVSPCLSRKSPV 439
ST + STP+ SSS S P T S L+ +P+
Sbjct: 843 STVVNSSTPITSSSVLNSSTPITSSTALNTSTPI 876
Score = 26.2 bits (55), Expect = 6.2
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -3
Query: 540 STSGSRSTPLFSSSSAIDSAPETVSPCLSRKSPV 439
ST + STP+ SSS S P T S L+ +P+
Sbjct: 939 STGLNTSTPITSSSVLNSSTPITSSTVLNSSTPI 972
Score = 26.2 bits (55), Expect = 6.2
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -3
Query: 540 STSGSRSTPLFSSSSAIDSAPETVSPCLSRKSPV 439
ST + STP+ SSS S P T S L+ +P+
Sbjct: 2139 STVVNSSTPITSSSVLNSSTPITSSTALNTSTPI 2172
Score = 26.2 bits (55), Expect = 6.2
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = -3
Query: 540 STSGSRSTPLFSSSSAIDSAPETVSPCLSRKSPVRAGK*PMVILNFLWASEGPASKPSAA 361
ST + STP+ SSS S P T S ++ +P+ + + +S +S P +
Sbjct: 2331 STVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTALNTSTSITSSSVLNSSTPITS 2390
Query: 360 ST--NTRAP 340
ST NT P
Sbjct: 2391 STVVNTSTP 2399
Score = 26.2 bits (55), Expect = 6.2
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -3
Query: 540 STSGSRSTPLFSSSSAIDSAPETVSPCLSRKSPV 439
ST + STP+ SSS S P T S L+ +P+
Sbjct: 2451 STVVNSSTPITSSSVLNSSTPITSSTALNTSTPI 2484
Score = 25.8 bits (54), Expect = 8.2
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Frame = -3
Query: 669 TMASVSQRPSGPKKAATP-AQLISVMSLVEVTMSYFVSFHCN*ISTSG-SRSTPLFSSSS 496
T S+S + P+ +T +V S +T S ++ S+S + STP+ SSS
Sbjct: 354 TTNSISFANTTPENTSTQITSPTAVNSSTPITSSSVLNSSTPITSSSILNTSTPITSSSV 413
Query: 495 AIDSAPETVSPCLSRKSPVRAGK*PMVILNFLWASEGPASKPSAASTNT 349
S P T S L+ +P+ + +LN S P + +A +T+T
Sbjct: 414 LNSSTPITSSSILNSSTPITSS----TVLN----SSTPITSSTALNTST 454
Score = 25.8 bits (54), Expect = 8.2
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -3
Query: 540 STSGSRSTPLFSSSSAIDSAPETVSPCLSRKSPV 439
ST + STP+ SSS S P T S L+ +P+
Sbjct: 603 STVLNSSTPITSSSVLNSSTPITSSTALNTSTPI 636
Score = 25.8 bits (54), Expect = 8.2
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -3
Query: 540 STSGSRSTPLFSSSSAIDSAPETVSPCLSRKSPV 439
ST + STP+ SSS S P T S L+ +P+
Sbjct: 783 STVVNTSTPITSSSVLNSSTPITSSTVLNSSTPI 816
Score = 25.8 bits (54), Expect = 8.2
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -3
Query: 540 STSGSRSTPLFSSSSAIDSAPETVSPCLSRKSPV 439
ST+ + STP+ SSS S P T S L+ +P+
Sbjct: 915 STALNTSTPITSSSVLNSSTPITSSTGLNTSTPI 948
Score = 25.8 bits (54), Expect = 8.2
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -3
Query: 540 STSGSRSTPLFSSSSAIDSAPETVSPCLSRKSPV 439
ST + STP+ SSS S P T S L+ +P+
Sbjct: 3051 STVLNSSTPITSSSVLNSSTPITSSTALNTSTPI 3084
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 27.9 bits (59), Expect = 2.0
Identities = 20/75 (26%), Positives = 33/75 (44%)
Frame = -3
Query: 540 STSGSRSTPLFSSSSAIDSAPETVSPCLSRKSPVRAGK*PMVILNFLWASEGPASKPSAA 361
+ S + + P+ + S SAP ++ P P+ A P + + A PA P+A
Sbjct: 408 NASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAP 467
Query: 360 STNTRAPCHMPSPSP 316
AP P+P+P
Sbjct: 468 PLPPAAPAPPPAPAP 482
>SPCC1919.12c |||aminopeptidase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 843
Score = 26.6 bits (56), Expect = 4.7
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 515 GVDLLPDVEIQLQWNDTKY 571
G +LL D+E Q WND +Y
Sbjct: 47 GPNLLKDLEFQRAWNDLEY 65
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 25.8 bits (54), Expect = 8.2
Identities = 34/123 (27%), Positives = 51/123 (41%), Gaps = 6/123 (4%)
Frame = -3
Query: 672 ATMASVSQRPSGPKKAATPAQ--LISVMSLVEVTMSYFVSFHCN*ISTSGSRSTPLFSSS 499
AT +S S ++TP+ L S S + S N +T+ + STPL S S
Sbjct: 269 ATSSSAQYNTSSLLPSSTPSSTPLSSANSTTATSASSTPLTSVNSTTTTSASSTPLSSVS 328
Query: 498 SA-IDSAPETVSPCLS---RKSPVRAGK*PMVILNFLWASEGPASKPSAASTNTRAPCHM 331
SA +A T S LS + A P+ +N A+ +S P + +T A
Sbjct: 329 SANSTTATSTSSTPLSSVNSTTATSASSTPLTSVNSTTATSA-SSTPLTSVNSTSATSAS 387
Query: 330 PSP 322
+P
Sbjct: 388 STP 390
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 25.8 bits (54), Expect = 8.2
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -3
Query: 561 SFHCN*ISTSGSRSTPLFSSS-SAIDSAPETVSP 463
SF+ N + S S++TP SSS + S ET SP
Sbjct: 635 SFNVNSVGPSSSQTTPTSSSSITGSQSLKETSSP 668
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,602,793
Number of Sequences: 5004
Number of extensions: 76734
Number of successful extensions: 317
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 311
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 442483990
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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