Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_O03
         (881 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23178-1|AAK68301.1| 1280|Caenorhabditis elegans Guanylyl cyclas...    81   1e-15
AL132860-5|CAB60515.1|  798|Caenorhabditis elegans Hypothetical ...    32   0.62 
U88167-7|AAB42229.1|  378|Caenorhabditis elegans Hypothetical pr...    29   4.4  
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e...    28   7.7  

>U23178-1|AAK68301.1| 1280|Caenorhabditis elegans Guanylyl cyclase
           protein 12 protein.
          Length = 1280

 Score = 81.0 bits (191), Expect = 1e-15
 Identities = 44/100 (44%), Positives = 60/100 (60%), Gaps = 4/100 (4%)
 Frame = +2

Query: 473 VSGALSMALEELNNGVDLLPDVEIQLQWNDTKYDMVTSTRLITEMSCAGVAAFFGPEGRC 652
           VSGAL  A+ E+N   DL+P  +++  + +T  +   STRL  E   AG   F GPE  C
Sbjct: 141 VSGALVAAIVEINQDKDLIPAYQLKYVFGNTCGNDSHSTRLFMEHWQAGARVFIGPEKNC 200

Query: 653 ETEAIVAQSRNLPMISYKCSDYQVSR----LPNFARLEPP 760
           +TEA +A S+NLP+ISY+C+D  +SR       FAR  PP
Sbjct: 201 KTEAAMAASQNLPIISYRCNDQDISRDDYHYRTFARTVPP 240


>AL132860-5|CAB60515.1|  798|Caenorhabditis elegans Hypothetical
           protein Y56A3A.6 protein.
          Length = 798

 Score = 31.9 bits (69), Expect = 0.62
 Identities = 20/61 (32%), Positives = 29/61 (47%)
 Frame = -3

Query: 522 STPLFSSSSAIDSAPETVSPCLSRKSPVRAGK*PMVILNFLWASEGPASKPSAASTNTRA 343
           S+PL   ++++D  P T SP + RKS V A + P+        S  P  +P     NT  
Sbjct: 557 SSPLMIRAASVDQNPMTASPSVIRKSQVTATQSPVSYRKIPPTSPTPQRRP---LNNTEV 613

Query: 342 P 340
           P
Sbjct: 614 P 614


>U88167-7|AAB42229.1|  378|Caenorhabditis elegans Hypothetical
           protein D2092.2 protein.
          Length = 378

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 27/80 (33%), Positives = 40/80 (50%)
 Frame = -3

Query: 678 DCATMASVSQRPSGPKKAATPAQLISVMSLVEVTMSYFVSFHCN*ISTSGSRSTPLFSSS 499
           D  + +S S+ P    + + PA  +S  S      S+ +    + I+TS S S+P  SS 
Sbjct: 255 DFQSSSSPSEEPLDMSQKSMPAPRVSTAS--PDPPSFVLPTARSPINTSPS-SSPKASSP 311

Query: 498 SAIDSAPETVSPCLSRKSPV 439
            A  S+P+  SP  S KSPV
Sbjct: 312 KA--SSPKAASPVSSPKSPV 329


>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of efl-1
            mutant phenotypeprotein 1 protein.
          Length = 4177

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -3

Query: 396  ASEGPASKPSAASTNTRAPCHMPSPSP*QFHLVYP 292
            A+E PA  PSA  +++ A    P+P+P +  L  P
Sbjct: 2809 AAEAPAPAPSAEQSDSPASPDAPAPAPEEIGLATP 2843


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,173,732
Number of Sequences: 27780
Number of extensions: 447857
Number of successful extensions: 1144
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1143
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)