Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_O02
         (930 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001485-1|AAN71240.1|  339|Drosophila melanogaster LD22928p pro...    33   0.74 
AE014297-968|AAF54400.2|  339|Drosophila melanogaster CG8208-PA,...    33   0.74 
U31961-5|AAA84404.1|  424|Drosophila melanogaster protein ( Dros...    29   6.9  
AE014297-2268|AAF55361.3|  417|Drosophila melanogaster CG10349-P...    29   6.9  

>BT001485-1|AAN71240.1|  339|Drosophila melanogaster LD22928p
           protein.
          Length = 339

 Score = 32.7 bits (71), Expect = 0.74
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +3

Query: 684 FPPGKLPRCALLFPTLPVYRXTCSAFSXLSG 776
           F PGK+P CAL  P++ +YR +       SG
Sbjct: 82  FQPGKMPHCALPSPSISLYRCSAMPLPIASG 112


>AE014297-968|AAF54400.2|  339|Drosophila melanogaster CG8208-PA,
           isoform A protein.
          Length = 339

 Score = 32.7 bits (71), Expect = 0.74
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +3

Query: 684 FPPGKLPRCALLFPTLPVYRXTCSAFSXLSG 776
           F PGK+P CAL  P++ +YR +       SG
Sbjct: 82  FQPGKMPHCALPSPSISLYRCSAMPLPIASG 112


>U31961-5|AAA84404.1|  424|Drosophila melanogaster protein (
           Drosophila melanogasterbithorax complex (BX-C), complete
           sequence. ).
          Length = 424

 Score = 29.5 bits (63), Expect = 6.9
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +3

Query: 363 ESANARGXAVCXLGALPLPRSLTRCXRSFGCG 458
           ES      +VC  G LP+P  L  C +  GCG
Sbjct: 340 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 371


>AE014297-2268|AAF55361.3|  417|Drosophila melanogaster CG10349-PA
           protein.
          Length = 417

 Score = 29.5 bits (63), Expect = 6.9
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +3

Query: 363 ESANARGXAVCXLGALPLPRSLTRCXRSFGCG 458
           ES      +VC  G LP+P  L  C +  GCG
Sbjct: 333 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 364


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,997,096
Number of Sequences: 53049
Number of extensions: 422841
Number of successful extensions: 688
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 688
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4587341472
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)