Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_N24
(937 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 42 2e-04
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 38 0.002
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 38 0.003
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 36 0.011
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 32 0.10
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 31 0.18
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 31 0.18
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 31 0.23
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 0.71
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 28 2.2
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 2.9
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 27 2.9
SPAC222.09 |seb1||RNA-binding protein Seb1 |Schizosaccharomyces ... 27 3.8
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 27 5.0
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 6.6
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 26 8.8
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 26 8.8
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 41.5 bits (93), Expect = 2e-04
Identities = 27/63 (42%), Positives = 29/63 (46%)
Frame = -3
Query: 848 RGXRGGRXXGKGXGXGXRGXPTGGXXQGGXAXGGL*ARRGXPRXGLGXAXGGXXXQGXGX 669
RG RGG G+G G RG GG +GG GG RG R G G A GG G
Sbjct: 8 RGGRGGSRGGRGGFNGGRGGFGGG--RGGARGGGRGGARGG-RGGRGGARGGRGGSSGGR 64
Query: 668 XGA 660
GA
Sbjct: 65 GGA 67
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -3
Query: 848 RGXRGGRXXGKGXGXGXRGXPTGG 777
RG RGG G+G G RG GG
Sbjct: 47 RGGRGGARGGRGGSSGGRGGAKGG 70
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = -3
Query: 845 GXRGGRXXGKGXGXGXRGXPTGGXXQGGXAXGG 747
G RGG G+G G RG G G A GG
Sbjct: 38 GGRGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 37.9 bits (84), Expect = 0.002
Identities = 28/101 (27%), Positives = 37/101 (36%), Gaps = 1/101 (0%)
Frame = +1
Query: 541 APPGAVXRXSPESGAPPGRTXXPKGPETARDPXKXRXAGXAPXXPXPXXXXPPFAXPSPX 720
APP V S E + P + P P + P + + AP P P PP PS
Sbjct: 1062 APP-PVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGA 1120
Query: 721 RGXPRRAYNXXXXXXXXXXPPVGXP-LXPXPXPFPXXRPPL 840
P+ + PPV P + P P P PP+
Sbjct: 1121 PPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPV 1161
Score = 37.5 bits (83), Expect = 0.003
Identities = 32/110 (29%), Positives = 36/110 (32%), Gaps = 6/110 (5%)
Frame = +1
Query: 535 VXAPPGAVXRXSPESGAPP-----GRTXXPKGPETARDPXKXRXAGXAPXXPXPXXXXPP 699
V P GA P APP G PK P A P +G P P P PP
Sbjct: 1133 VPVPSGAPPVPKPSVAAPPVPAPSGAPPVPK-PSVAAPPVPAPSSGIPPV-PKPAAGVPP 1190
Query: 700 FAXPSPXRGXPRRAYNXXXXXXXXXXPPVGXP-LXPXPXPFPXXRPPLXP 846
PS P+ + PPV P P P P + P P
Sbjct: 1191 VPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVP 1240
Score = 35.9 bits (79), Expect = 0.008
Identities = 28/77 (36%), Positives = 32/77 (41%), Gaps = 11/77 (14%)
Frame = +3
Query: 732 PTGL*PXPGXS---PLXXSPXGXPPXPXPX-PLPXXPAPPX--PPXXQXVAXXPXGPPXX 893
P+G P P S P +P G PP P P P PAP PP + A P PP
Sbjct: 1136 PSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPS 1195
Query: 894 G---LPXP--GXXPXPP 929
+P P G P PP
Sbjct: 1196 EAPPVPKPSVGVPPVPP 1212
Score = 33.9 bits (74), Expect = 0.033
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Frame = +3
Query: 747 PXPGXSPLXXSPXGXPPXPXPXPLPXXPAPP--XPPXXQXVAXXPXGPPXXGLP 902
P G P+ G PP P P P P P PP P P GLP
Sbjct: 1174 PSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLP 1227
Score = 32.3 bits (70), Expect = 0.10
Identities = 31/105 (29%), Positives = 34/105 (32%), Gaps = 1/105 (0%)
Frame = +1
Query: 535 VXAPPGAVXRXSPESGAPPGRTXXPKGPETARDPXKXRXAGXAPXXPXPXXXXPPFAXPS 714
V AP G P APP PK P A P AP P P PP PS
Sbjct: 1085 VPAPSGIPPVPKPSVAAPP----VPK-PSVAVPPVPA--PSGAPPVPKPSVAAPPVPVPS 1137
Query: 715 PXRGXPRRAYNXXXXXXXXXXPPVGXP-LXPXPXPFPXXRPPLXP 846
P+ + PPV P + P P P P P
Sbjct: 1138 GAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVP 1182
Score = 31.1 bits (67), Expect = 0.23
Identities = 20/62 (32%), Positives = 22/62 (35%), Gaps = 2/62 (3%)
Frame = +3
Query: 747 PXPGXSPLXXSPXGXPPXPXPXPLPXXPAPPXPPXXQXV--AXXPXGPPXXGLPXPGXXP 920
P P +P +P G PP P P APP P V P G P P P
Sbjct: 1077 PAPSGAPPVPAPSGIPPVPKPS----VAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPP 1132
Query: 921 XP 926
P
Sbjct: 1133 VP 1134
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/61 (24%), Positives = 18/61 (29%)
Frame = +3
Query: 747 PXPGXSPLXXSPXGXPPXPXPXPLPXXPAPPXPPXXQXVAXXPXGPPXXGLPXPGXXPXP 926
P P +P P PP P PP P + P +P P P
Sbjct: 1035 PVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPV 1094
Query: 927 P 929
P
Sbjct: 1095 P 1095
Score = 27.9 bits (59), Expect = 2.2
Identities = 27/106 (25%), Positives = 32/106 (30%), Gaps = 3/106 (2%)
Frame = +1
Query: 541 APPGAVXRXSPESGAPPGRTXXPKGPETARD--PXKXRXAGXAPXXPXPXXXXPPFAXPS 714
APP V +P P PK A P + P P P PP PS
Sbjct: 1031 APPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGA-PPVPAPS 1089
Query: 715 PXRGXPRRAYNXXXXXXXXXX-PPVGXPLXPXPXPFPXXRPPLXPL 849
P+ + PPV P P P P P P+
Sbjct: 1090 GIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPV 1135
Score = 27.5 bits (58), Expect = 2.9
Identities = 22/80 (27%), Positives = 24/80 (30%)
Frame = +1
Query: 607 PKGPETARDPXKXRXAGXAPXXPXPXXXXPPFAXPSPXRGXPRRAYNXXXXXXXXXXPPV 786
P P AR P + + AP P P PP PS P
Sbjct: 1004 PAAP-LARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVP-----IPTSTPPVPKSSS 1057
Query: 787 GXPLXPXPXPFPXXRPPLXP 846
G P P P P P P P
Sbjct: 1058 GAPSAPPPVPAPSSEIPSIP 1077
Score = 26.6 bits (56), Expect = 5.0
Identities = 22/86 (25%), Positives = 23/86 (26%)
Frame = +2
Query: 677 PPXRXXPXSPXPVXXXAXPDGPITXPXXXPLXXXPXWGXPXSRPXPPSXXPGPPXPPXXX 856
PP PV + PI P P P P P S P P P
Sbjct: 1012 PPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPV--PKSSSGAPSAPPPVPAP 1069
Query: 857 XRGXLXIXAPLXGSPXSGXXPXPPXP 934
I AP P PP P
Sbjct: 1070 SSEIPSIPAPSGAPPVPAPSGIPPVP 1095
Score = 26.2 bits (55), Expect = 6.6
Identities = 18/63 (28%), Positives = 20/63 (31%), Gaps = 3/63 (4%)
Frame = +1
Query: 535 VXAPPGAVXRXSPESGAPP---GRTXXPKGPETARDPXKXRXAGXAPXXPXPXXXXPPFA 705
V P V P S APP P P + P + P P P PP
Sbjct: 1181 VPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVP 1240
Query: 706 XPS 714
PS
Sbjct: 1241 APS 1243
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 37.5 bits (83), Expect = 0.003
Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Frame = +3
Query: 792 PPXPXPXPLPXXPAP---PXPPXXQXVAXXPXGPPXXGLPXPGXXPXPP 929
PP P P + PAP P PP + P PP G+ G P PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 33.5 bits (73), Expect = 0.044
Identities = 20/53 (37%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
Frame = +3
Query: 753 PGXSPLXXSPXGXP-PXPXPXPLPXXPAPPXPPXXQXVAXXPXGPPXXGLPXP 908
P P P P P P P P P PP PP VA GPP P P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAG--AGPPPPPPPPP 783
Score = 31.1 bits (67), Expect = 0.23
Identities = 17/57 (29%), Positives = 22/57 (38%), Gaps = 2/57 (3%)
Frame = +3
Query: 747 PXPGXSPLXXSPXGXP-PXPXPXPLPXXPA-PPXPPXXQXVAXXPXGPPXXGLPXPG 911
P P + + +P P P P P P+ P PP PP P PP + G
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGG 789
Score = 30.3 bits (65), Expect = 0.41
Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 4/43 (9%)
Frame = +3
Query: 732 PTGL*PXPGXSPLXXSPX----GXPPXPXPXPLPXXPAPPXPP 848
P + P P +P+ P G PP P P P PP PP
Sbjct: 737 PAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 30.3 bits (65), Expect = 0.41
Identities = 15/54 (27%), Positives = 17/54 (31%)
Frame = +3
Query: 747 PXPGXSPLXXSPXGXPPXPXPXPLPXXPAPPXPPXXQXVAXXPXGPPXXGLPXP 908
P P +P+ P PP P P PP PP P P P
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEPEP 803
Score = 26.6 bits (56), Expect = 5.0
Identities = 14/41 (34%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Frame = +2
Query: 815 PSXXPGP-PXPPXXXXRGXLXIXAPLXGSPXSGXXPXPPXP 934
P+ P P P PP G P G +G P PP P
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 26.2 bits (55), Expect = 6.6
Identities = 18/59 (30%), Positives = 20/59 (33%)
Frame = +2
Query: 671 PRPPXRXXPXSPXPVXXXAXPDGPITXPXXXPLXXXPXWGXPXSRPXPPSXXPGPPXPP 847
P PP +P P P PI P P G + P PP PP PP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPP---PPPPGVAGAGPPPP-----PPPPP 783
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 35.5 bits (78), Expect = 0.011
Identities = 20/61 (32%), Positives = 21/61 (34%)
Frame = +3
Query: 747 PXPGXSPLXXSPXGXPPXPXPXPLPXXPAPPXPPXXQXVAXXPXGPPXXGLPXPGXXPXP 926
P P P P P P P+ APP PP P G P P P P P
Sbjct: 418 PTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMP-AAPPLPPAAPAP 476
Query: 927 P 929
P
Sbjct: 477 P 477
Score = 32.3 bits (70), Expect = 0.10
Identities = 25/91 (27%), Positives = 30/91 (32%)
Frame = +2
Query: 575 NPGXPPAGPCXXKAXKRPXTRKRXAXLXXPHXPRPPXRXXPXSPXPVXXXAXPDGPITXP 754
NP PP A P + P P PP P +P + A P P+ P
Sbjct: 387 NPPAPPPAIPGRSAPALPPLGNA-SRTSTPPVPTPPS-LPPSAPPSLPPSAPPSLPMGAP 444
Query: 755 XXXPLXXXPXWGXPXSRPXPPSXXPGPPXPP 847
PL P + P P PP PP
Sbjct: 445 AAPPLPP----SAPIAPPLPAGMPAAPPLPP 471
Score = 29.5 bits (63), Expect = 0.71
Identities = 18/60 (30%), Positives = 22/60 (36%), Gaps = 1/60 (1%)
Frame = +3
Query: 753 PGXSPLXXSPXGXPPXPXPXPLPXXPA-PPXPPXXQXVAXXPXGPPXXGLPXPGXXPXPP 929
PG S P G P+P P+ PP P + P PP + P P PP
Sbjct: 396 PGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPP----SLPPSAPPSLPMGAPAAPPLPP 451
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/58 (27%), Positives = 17/58 (29%)
Frame = +3
Query: 756 GXSPLXXSPXGXPPXPXPXPLPXXPAPPXPPXXQXVAXXPXGPPXXGLPXPGXXPXPP 929
G PL PP P P P P P P PP +P PP
Sbjct: 349 GSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPP-PAIPGRSAPALPP 405
Score = 25.8 bits (54), Expect = 8.8
Identities = 12/36 (33%), Positives = 13/36 (36%)
Frame = +3
Query: 780 PXGXPPXPXPXPLPXXPAPPXPPXXQXVAXXPXGPP 887
P PP P P P PP V+ P PP
Sbjct: 237 PSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPP 272
Score = 25.8 bits (54), Expect = 8.8
Identities = 14/52 (26%), Positives = 14/52 (26%)
Frame = +3
Query: 753 PGXSPLXXSPXGXPPXPXPXPLPXXPAPPXPPXXQXVAXXPXGPPXXGLPXP 908
P P G PP P PP PP P P P P
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPP 363
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 32.3 bits (70), Expect = 0.10
Identities = 28/94 (29%), Positives = 29/94 (30%)
Frame = -3
Query: 866 GHXLXXRGXRGGRXXGKGXGXGXRGXPTGGXXQGGXAXGGL*ARRGXPRXGLGXAXGGXX 687
G+ RG GG G G G G P G GG G G G GG
Sbjct: 177 GNLFHHRGHNGGGFGG--FGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFE 234
Query: 686 XQGXGXXGAXPAXRXFXGSRAVSGPXGXXVRPGG 585
G G G P GP G PGG
Sbjct: 235 G-GPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGG 267
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 31.5 bits (68), Expect = 0.18
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +3
Query: 747 PXPGXSPLXXSPXGXPPXPXPXPLPXXPAP 836
P PG PL P P P PLP P P
Sbjct: 118 PLPGEPPLPDEPVPEEPLPGEPPLPNEPVP 147
Score = 30.3 bits (65), Expect = 0.41
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +3
Query: 747 PXPGXSPLXXSPXGXPPXPXPXPLPXXPAPPXP 845
P P PL P P P PLP P P P
Sbjct: 102 PLPREPPLPNEPVPEEPLPGEPPLPDEPVPEEP 134
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 31.5 bits (68), Expect = 0.18
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = -3
Query: 848 RGXRGGRXXGKGXGXGXRGXPTGGXXQGGXAXGGL*ARRGXPRXGL-GXAXGG 693
RG RGG G+G G G + G GG G RG R G G + GG
Sbjct: 137 RGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRGG 189
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 31.1 bits (67), Expect = 0.23
Identities = 16/61 (26%), Positives = 21/61 (34%)
Frame = +3
Query: 747 PXPGXSPLXXSPXGXPPXPXPXPLPXXPAPPXPPXXQXVAXXPXGPPXXGLPXPGXXPXP 926
P P +P+ P P +P P+ P PP V P P +P P
Sbjct: 605 PQPPVAPVAPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQRPAVPVVPEAPSV 664
Query: 927 P 929
P
Sbjct: 665 P 665
Score = 29.9 bits (64), Expect = 0.54
Identities = 15/61 (24%), Positives = 20/61 (32%)
Frame = +3
Query: 747 PXPGXSPLXXSPXGXPPXPXPXPLPXXPAPPXPPXXQXVAXXPXGPPXXGLPXPGXXPXP 926
P P +P+ P P +P P+ P PP P P +P P
Sbjct: 575 PQPPVAPVAPEVPSVPQPPVAPVVPEAPSVPQPPVAPVAPEVPSVPQRPAVPVVPEAPSV 634
Query: 927 P 929
P
Sbjct: 635 P 635
Score = 29.5 bits (63), Expect = 0.71
Identities = 17/61 (27%), Positives = 19/61 (31%)
Frame = +3
Query: 747 PXPGXSPLXXSPXGXPPXPXPXPLPXXPAPPXPPXXQXVAXXPXGPPXXGLPXPGXXPXP 926
P +P S P P P P PP P V P P +P P P
Sbjct: 608 PVAPVAPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQRPAVPVVPEAPSVPQP 667
Query: 927 P 929
P
Sbjct: 668 P 668
Score = 29.5 bits (63), Expect = 0.71
Identities = 14/52 (26%), Positives = 19/52 (36%)
Frame = +3
Query: 747 PXPGXSPLXXSPXGXPPXPXPXPLPXXPAPPXPPXXQXVAXXPXGPPXXGLP 902
P P +P+ P P +P P+ P PP V P P +P
Sbjct: 635 PQPPAAPVVPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQPPAVP 686
Score = 29.1 bits (62), Expect = 0.94
Identities = 17/61 (27%), Positives = 19/61 (31%)
Frame = +3
Query: 747 PXPGXSPLXXSPXGXPPXPXPXPLPXXPAPPXPPXXQXVAXXPXGPPXXGLPXPGXXPXP 926
P +P S P P P P PP P V P P +P P P
Sbjct: 578 PVAPVAPEVPSVPQPPVAPVVPEAPSVPQPPVAPVAPEVPSVPQRPAVPVVPEAPSVPQP 637
Query: 927 P 929
P
Sbjct: 638 P 638
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.5 bits (63), Expect = 0.71
Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 3/26 (11%)
Frame = +3
Query: 780 PXGXPPXPXPXP---LPXXPAPPXPP 848
P G PP P P P P P PP PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 27.9 bits (59), Expect = 2.2
Identities = 20/63 (31%), Positives = 21/63 (33%), Gaps = 2/63 (3%)
Frame = +3
Query: 747 PXPGXSPLXXSPXGXPPXPXPXPLPXXPAPPXPPXXQXVAXXPXGP--PXXGLPXPGXXP 920
P P + P PP P P P PA P V P P P P P P
Sbjct: 150 PPPSPASAPPIPSKAPPIPSSLPPPAQPAAP-------VKSPPSAPSLPSAVPPMPPKVP 202
Query: 921 XPP 929
PP
Sbjct: 203 PPP 205
Score = 27.1 bits (57), Expect = 3.8
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +3
Query: 777 SPXGXPPXPXPXPLPXXPAPP 839
+P PP P P P PAPP
Sbjct: 2 APAPPPPPPAPAPAAAAPAPP 22
Score = 26.6 bits (56), Expect = 5.0
Identities = 12/35 (34%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Frame = +3
Query: 828 PAPPXPPXXQXVAXXPXG-PPXXGLPXPGXXPXPP 929
P+ P PP Q P PP +P P PP
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPP 159
Score = 26.2 bits (55), Expect = 6.6
Identities = 19/64 (29%), Positives = 25/64 (39%)
Frame = +1
Query: 541 APPGAVXRXSPESGAPPGRTXXPKGPETARDPXKXRXAGXAPXXPXPXXXXPPFAXPSPX 720
APP P + APP + P P +A P + AP P P PP +P
Sbjct: 129 APPTPQSELRPPTSAPPRPSIPPPSPASA-PPIPSK----AP--PIPSSLPPPAQPAAPV 181
Query: 721 RGXP 732
+ P
Sbjct: 182 KSPP 185
Score = 25.8 bits (54), Expect = 8.8
Identities = 22/67 (32%), Positives = 22/67 (32%), Gaps = 1/67 (1%)
Frame = +3
Query: 732 PTGL*PXPGXSPLXXSPXGXPPXPXPXPLPXXPAP-PXPPXXQXVAXXPXGPPXXGLPXP 908
PT P P P SP PP P P P PP Q A P LP
Sbjct: 140 PTSAPPRPSIPP--PSPASAPPIPSK----APPIPSSLPPPAQPAAPVKSPPSAPSLP-S 192
Query: 909 GXXPXPP 929
P PP
Sbjct: 193 AVPPMPP 199
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.5 bits (58), Expect = 2.9
Identities = 19/69 (27%), Positives = 22/69 (31%)
Frame = +2
Query: 731 PDGPITXPXXXPLXXXPXWGXPXSRPXPPSXXPGPPXPPXXXXRGXLXIXAPLXGSPXSG 910
P P++ P P P + P PP P PP P PL S
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPAS---- 1738
Query: 911 XXPXPPXPG 937
P P PG
Sbjct: 1739 SAPSVPNPG 1747
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 27.5 bits (58), Expect = 2.9
Identities = 17/51 (33%), Positives = 17/51 (33%), Gaps = 1/51 (1%)
Frame = +3
Query: 777 SPXGXPPXPXPXPLPXX-PAPPXPPXXQXVAXXPXGPPXXGLPXPGXXPXP 926
SP G P P PAPP P V P PP P P P
Sbjct: 711 SPMGTGAVNSPAIKPQVTPAPPTPAPTPAVKHHPPPPPVRSSISPSMPPAP 761
>SPAC222.09 |seb1||RNA-binding protein Seb1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 27.1 bits (57), Expect = 3.8
Identities = 16/48 (33%), Positives = 18/48 (37%), Gaps = 2/48 (4%)
Frame = +1
Query: 709 PSPXRGXPRRAYNXXXXXXXXXXPPVGXPLXPXPXPFP--XXRPPLXP 846
PSP G PRR+ + PP P P FP R P P
Sbjct: 350 PSPRSGRPRRSPSPSHLSIPSTLPPADGVPKPTPDGFPRRFERDPTIP 397
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 26.6 bits (56), Expect = 5.0
Identities = 20/61 (32%), Positives = 22/61 (36%), Gaps = 3/61 (4%)
Frame = +3
Query: 753 PGXS-PLXXSPXGXPPXPXPXPLPXXPAPPXPPXXQXVAXXPXG--PPXXGLPXPGXXPX 923
PG S PL + P P P P+P P P Q P PP P PG
Sbjct: 487 PGTSAPLPPTTFAPPGVPLP-PIPGAPGMPNLNMSQPPMVPPGMALPPGMPAPFPGYPAV 545
Query: 924 P 926
P
Sbjct: 546 P 546
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.2 bits (55), Expect = 6.6
Identities = 14/51 (27%), Positives = 16/51 (31%)
Frame = +2
Query: 695 PXSPXPVXXXAXPDGPITXPXXXPLXXXPXWGXPXSRPXPPSXXPGPPXPP 847
P P P P T P G + P PP+ PP PP
Sbjct: 236 PAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQPPRPP 286
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 25.8 bits (54), Expect = 8.8
Identities = 18/42 (42%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = -3
Query: 836 GGRXXGKGXGXGXRGXPTG-GXXQGGXAXGGL*ARRGXPRXG 714
GG G+G G G RG G G GG G AR G P G
Sbjct: 447 GGSRGGRG-GFGGRGGFGGRGGFGGGRGRGRGGARSGNPNRG 487
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 25.8 bits (54), Expect = 8.8
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +3
Query: 792 PPXPXPXPLPXXPAPPXPPXXQXVAXXPXGPPXXGLPXPGXXPXP 926
PP P P LP P P A P GPP G P
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTS---ALPPAGPPAGATAISGNPGMP 1923
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,792,192
Number of Sequences: 5004
Number of extensions: 24364
Number of successful extensions: 230
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 141
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 475330268
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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