Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_N24
         (937 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    34   0.005
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    33   0.012
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    31   0.050
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    30   0.12 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            28   0.35 
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   2.5  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    25   3.3  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   4.4  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 34.3 bits (75), Expect = 0.005
 Identities = 20/48 (41%), Positives = 22/48 (45%)
 Frame = -3

Query: 866 GHXLXXRGXRGGRXXGKGXGXGXRGXPTGGXXQGGXAXGGL*ARRGXP 723
           G+    RG RGGR  G+G G G RG   GG   GG   G      G P
Sbjct: 63  GYGGGGRGGRGGRGGGRGRGRG-RGGRDGGGGFGGGGYGDRNGDGGRP 109


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 33.1 bits (72), Expect = 0.012
 Identities = 31/103 (30%), Positives = 34/103 (33%), Gaps = 2/103 (1%)
 Frame = -3

Query: 845 GXRGGRXXGKGXGXGXRGXPTGGXXQGGXAXGGL*AR--RGXPRXGLGXAXGGXXXQGXG 672
           G  GG   G   G G  G  +GG   GG   GG   R  R   R   G   GG    G  
Sbjct: 201 GAGGGGSGGGAPGGG--GGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNGGGGGGGMQ 258

Query: 671 XXGAXPAXRXFXGSRAVSGPXGXXVRPGGAPDSGDXRXTAPGG 543
             G   A       R      G  +  GG   SGD    + GG
Sbjct: 259 LDGRGNAIPSMVVDRRGEDARGNIISDGGRIRSGDGGRDSRGG 301


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 31.1 bits (67), Expect = 0.050
 Identities = 16/50 (32%), Positives = 18/50 (36%)
 Frame = +3

Query: 780 PXGXPPXPXPXPLPXXPAPPXPPXXQXVAXXPXGPPXXGLPXPGXXPXPP 929
           P   P  P   PL   P  P PP    +   P   P  G+P  G    PP
Sbjct: 89  PGMIPGMPGAPPLLMGPNGPLPPPMMGMRPPPMMVPTMGMPPMGLGMRPP 138


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 29.9 bits (64), Expect = 0.12
 Identities = 20/78 (25%), Positives = 27/78 (34%)
 Frame = -3

Query: 803 GXRGXPTGGXXQGGXAXGGL*ARRGXPRXGLGXAXGGXXXQGXGXXGAXPAXRXFXGSRA 624
           G +G P     +G     GL  + G P  G+    G     G       P      G + 
Sbjct: 239 GVKGEPGEKGDRGEIGVKGLMGQSGPP--GMIGLKGDKGLAGLPGPSCLPGMSGEKGDKG 296

Query: 623 VSGPXGXXVRPGGAPDSG 570
            +GP G    PG A + G
Sbjct: 297 YTGPEGPPGEPGAASEKG 314



 Score = 25.0 bits (52), Expect = 3.3
 Identities = 11/27 (40%), Positives = 11/27 (40%)
 Frame = +1

Query: 202 PXXXGPPXPPXXXPPXXXXGPPPLRXP 282
           P   GPP PP    P    G P L  P
Sbjct: 712 PQRKGPPGPPGFNGPKGDKGLPGLAGP 738



 Score = 24.6 bits (51), Expect = 4.4
 Identities = 20/94 (21%), Positives = 30/94 (31%), Gaps = 1/94 (1%)
 Frame = -3

Query: 821 GKGXGXGXRGXPTGGXXQGGXAXGGL*ARRGXP-RXGLGXAXGGXXXQGXGXXGAXPAXR 645
           G+    G +G        G     G+   +G     G     G    +G       P   
Sbjct: 209 GQAGNDGLKGFQGRKGMMGAPGIQGVRGPQGVKGEPGEKGDRGEIGVKGLMGQSGPPGMI 268

Query: 644 XFXGSRAVSGPXGXXVRPGGAPDSGDXRXTAPGG 543
              G + ++G  G    PG + + GD   T P G
Sbjct: 269 GLKGDKGLAGLPGPSCLPGMSGEKGDKGYTGPEG 302


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 28.3 bits (60), Expect = 0.35
 Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
 Frame = +3

Query: 780 PXGXP--PXPXPXPLPXXPAPPXPPXXQXVAXXPXGPPXXGLP 902
           P G P  P   P P P  P PP  P    +A  P G P    P
Sbjct: 570 PAGFPNLPNAQPPPAP-PPPPPMGPPPSPLAGGPLGGPAGSRP 611



 Score = 27.9 bits (59), Expect = 0.47
 Identities = 18/59 (30%), Positives = 20/59 (33%), Gaps = 1/59 (1%)
 Frame = +3

Query: 753 PGXSPLXXSPXGXPPXPXPXPLPXXPAPPXPPXXQXVAXXPXGPPXXGL-PXPGXXPXP 926
           P  +P    P G PP P        PA   PP    +      PP   L P P   P P
Sbjct: 581 PPPAPPPPPPMGPPPSPLAGGPLGGPAGSRPPLPNLLGFGGAAPPVTILVPYPIIIPLP 639



 Score = 25.8 bits (54), Expect = 1.9
 Identities = 20/67 (29%), Positives = 21/67 (31%), Gaps = 4/67 (5%)
 Frame = +1

Query: 544 PPGAVXRXSPESGAPP----GRTXXPKGPETARDPXKXRXAGXAPXXPXPXXXXPPFAXP 711
           P GAV    P+   PP         P  P   R P        A   P P    P    P
Sbjct: 536 PGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPPAPPPPPPMGPPP 595

Query: 712 SPXRGXP 732
           SP  G P
Sbjct: 596 SPLAGGP 602



 Score = 25.8 bits (54), Expect = 1.9
 Identities = 13/41 (31%), Positives = 15/41 (36%)
 Frame = +1

Query: 214 GPPXPPXXXPPXXXXGPPPLRXPXXKXXXGKIGKXXGFXCP 336
           G P  P   PP     PPP+  P      G +G   G   P
Sbjct: 572 GFPNLPNAQPPPAPPPPPPMGPPPSPLAGGPLGGPAGSRPP 612


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 25.4 bits (53), Expect = 2.5
 Identities = 13/33 (39%), Positives = 15/33 (45%)
 Frame = -3

Query: 845 GXRGGRXXGKGXGXGXRGXPTGGXXQGGXAXGG 747
           G  GG   G   G G  G  +GG   GG + GG
Sbjct: 842 GGAGGPLRGSSGGAG--GGSSGGGGSGGTSGGG 872


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 25.0 bits (52), Expect = 3.3
 Identities = 16/57 (28%), Positives = 20/57 (35%)
 Frame = -3

Query: 716 GLGXAXGGXXXQGXGXXGAXPAXRXFXGSRAVSGPXGXXVRPGGAPDSGDXRXTAPG 546
           GL    G    +G          +   G   + G  G    P GAP  G+ R  APG
Sbjct: 359 GLPGQKGDRGSEGLHGLKGQSGPKGEPGRDGIPGQPGI-AGPAGAPGGGEGRPGAPG 414


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.6 bits (51), Expect = 4.4
 Identities = 18/60 (30%), Positives = 19/60 (31%), Gaps = 2/60 (3%)
 Frame = +3

Query: 747 PXPGXSPLXXSPXGXPPXPXPXPLPXXPAPPXPPXXQXVAXXPXGPPXXGLP--XPGXXP 920
           P PG  P        PP     P    P  P PP    +   P G P    P   PG  P
Sbjct: 181 PNPGMPP--GPQMMRPPGNVGPPRTGTPTQPQPPRPGGMYPQPPGVPMPMRPQMPPGAVP 238


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 530,521
Number of Sequences: 2352
Number of extensions: 9026
Number of successful extensions: 59
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 102122397
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)