Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_N22
(908 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D38047-1|BAA07237.1| 257|Homo sapiens 26S proteasome subunit p3... 64 7e-10
BC065006-1|AAH65006.2| 257|Homo sapiens proteasome (prosome, ma... 64 7e-10
BC001164-1|AAH01164.3| 257|Homo sapiens proteasome (prosome, ma... 64 7e-10
AC005789-1|AAC62833.1| 257|Homo sapiens PP31_HUMAN protein. 64 7e-10
BT019688-1|AAV38494.1| 257|Homo sapiens proteasome (prosome, ma... 59 3e-08
D87686-1|BAA32662.2| 1253|Homo sapiens KIAA0017 protein protein. 31 7.6
BC068974-1|AAH68974.1| 1217|Homo sapiens splicing factor 3b, sub... 31 7.6
AJ001443-1|CAB56791.1| 1217|Homo sapiens spliceosomal protein SA... 31 7.6
>D38047-1|BAA07237.1| 257|Homo sapiens 26S proteasome subunit p31
protein.
Length = 257
Score = 64.1 bits (149), Expect = 7e-10
Identities = 34/78 (43%), Positives = 46/78 (58%)
Frame = +2
Query: 104 LRKLTTQSLXAEAARRLNLSSQQAVLEYGKKRNWRLGPDNCYRFTSEELTSVAFSGILPS 283
+ K + L EA R L ++ + + +Y KKR W LGP+N Y F S++ +PS
Sbjct: 182 IEKAYEKILFTEATRILFFNTPKKMTDYAKKRGWVLGPNNYYSFASQQ--QKPEDTTIPS 239
Query: 284 AELAQQTIEYARHLEMIV 337
ELA+Q IEYAR LEMIV
Sbjct: 240 TELAKQVIEYARQLEMIV 257
Score = 45.2 bits (102), Expect = 3e-04
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = +1
Query: 46 YTFFMDTLLETVRGEIAACIEKAYHTI 126
YTFF+D LL+T+R EIA CIEKAY I
Sbjct: 163 YTFFIDILLDTIRDEIAGCIEKAYEKI 189
>BC065006-1|AAH65006.2| 257|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 8 protein.
Length = 257
Score = 64.1 bits (149), Expect = 7e-10
Identities = 34/78 (43%), Positives = 46/78 (58%)
Frame = +2
Query: 104 LRKLTTQSLXAEAARRLNLSSQQAVLEYGKKRNWRLGPDNCYRFTSEELTSVAFSGILPS 283
+ K + L EA R L ++ + + +Y KKR W LGP+N Y F S++ +PS
Sbjct: 182 IEKAYEKILFTEATRILFFNTPKKMTDYAKKRGWVLGPNNYYSFASQQ--QKPEDTTIPS 239
Query: 284 AELAQQTIEYARHLEMIV 337
ELA+Q IEYAR LEMIV
Sbjct: 240 TELAKQVIEYARQLEMIV 257
Score = 45.2 bits (102), Expect = 3e-04
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = +1
Query: 46 YTFFMDTLLETVRGEIAACIEKAYHTI 126
YTFF+D LL+T+R EIA CIEKAY I
Sbjct: 163 YTFFIDILLDTIRDEIAGCIEKAYEKI 189
>BC001164-1|AAH01164.3| 257|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 8 protein.
Length = 257
Score = 64.1 bits (149), Expect = 7e-10
Identities = 34/78 (43%), Positives = 46/78 (58%)
Frame = +2
Query: 104 LRKLTTQSLXAEAARRLNLSSQQAVLEYGKKRNWRLGPDNCYRFTSEELTSVAFSGILPS 283
+ K + L EA R L ++ + + +Y KKR W LGP+N Y F S++ +PS
Sbjct: 182 IEKAYEKILFTEATRILFFNTPKKMTDYAKKRGWVLGPNNYYSFASQQ--QKPEDTTIPS 239
Query: 284 AELAQQTIEYARHLEMIV 337
ELA+Q IEYAR LEMIV
Sbjct: 240 TELAKQVIEYARQLEMIV 257
Score = 45.2 bits (102), Expect = 3e-04
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = +1
Query: 46 YTFFMDTLLETVRGEIAACIEKAYHTI 126
YTFF+D LL+T+R EIA CIEKAY I
Sbjct: 163 YTFFIDILLDTIRDEIAGCIEKAYEKI 189
>AC005789-1|AAC62833.1| 257|Homo sapiens PP31_HUMAN protein.
Length = 257
Score = 64.1 bits (149), Expect = 7e-10
Identities = 34/78 (43%), Positives = 46/78 (58%)
Frame = +2
Query: 104 LRKLTTQSLXAEAARRLNLSSQQAVLEYGKKRNWRLGPDNCYRFTSEELTSVAFSGILPS 283
+ K + L EA R L ++ + + +Y KKR W LGP+N Y F S++ +PS
Sbjct: 182 IEKAYEKILFTEATRILFFNTPKKMTDYAKKRGWVLGPNNYYSFASQQ--QKPEDTTIPS 239
Query: 284 AELAQQTIEYARHLEMIV 337
ELA+Q IEYAR LEMIV
Sbjct: 240 TELAKQVIEYARQLEMIV 257
Score = 45.2 bits (102), Expect = 3e-04
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = +1
Query: 46 YTFFMDTLLETVRGEIAACIEKAYHTI 126
YTFF+D LL+T+R EIA CIEKAY I
Sbjct: 163 YTFFIDILLDTIRDEIAGCIEKAYEKI 189
>BT019688-1|AAV38494.1| 257|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 8 protein.
Length = 257
Score = 58.8 bits (136), Expect = 3e-08
Identities = 33/78 (42%), Positives = 45/78 (57%)
Frame = +2
Query: 104 LRKLTTQSLXAEAARRLNLSSQQAVLEYGKKRNWRLGPDNCYRFTSEELTSVAFSGILPS 283
+ K + L EA R L ++ + + +Y KKR LGP+N Y F S++ +PS
Sbjct: 182 IEKAYEKILFTEATRILFFNTPKKMTDYAKKRGCVLGPNNYYSFASQQ--QKPEDTTIPS 239
Query: 284 AELAQQTIEYARHLEMIV 337
ELA+Q IEYAR LEMIV
Sbjct: 240 TELAKQVIEYARQLEMIV 257
Score = 45.2 bits (102), Expect = 3e-04
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = +1
Query: 46 YTFFMDTLLETVRGEIAACIEKAYHTI 126
YTFF+D LL+T+R EIA CIEKAY I
Sbjct: 163 YTFFIDILLDTIRDEIAGCIEKAYEKI 189
>D87686-1|BAA32662.2| 1253|Homo sapiens KIAA0017 protein protein.
Length = 1253
Score = 30.7 bits (66), Expect = 7.6
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -1
Query: 389 YTTKMFILH*QSKNIIFIQSSQDVWHTQWSVEPVQQMEE 273
YT + F++H +S N+I I++ + + + QQM E
Sbjct: 819 YTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAE 857
>BC068974-1|AAH68974.1| 1217|Homo sapiens splicing factor 3b,
subunit 3, 130kDa protein.
Length = 1217
Score = 30.7 bits (66), Expect = 7.6
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -1
Query: 389 YTTKMFILH*QSKNIIFIQSSQDVWHTQWSVEPVQQMEE 273
YT + F++H +S N+I I++ + + + QQM E
Sbjct: 783 YTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAE 821
>AJ001443-1|CAB56791.1| 1217|Homo sapiens spliceosomal protein SAP
130 protein.
Length = 1217
Score = 30.7 bits (66), Expect = 7.6
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -1
Query: 389 YTTKMFILH*QSKNIIFIQSSQDVWHTQWSVEPVQQMEE 273
YT + F++H +S N+I I++ + + + QQM E
Sbjct: 783 YTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAE 821
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,046,872
Number of Sequences: 237096
Number of extensions: 1469703
Number of successful extensions: 2122
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2117
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11770329464
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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