Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_N22
         (908 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69904-5|CAA93778.1|  250|Caenorhabditis elegans Hypothetical pr...    31   1.5  
U53336-10|AAA96182.2|  125|Caenorhabditis elegans Hypothetical p...    30   2.6  
Z99288-7|CAB63421.1|  362|Caenorhabditis elegans Hypothetical pr...    28   8.0  
U97194-5|AAB52448.1|  442|Caenorhabditis elegans Hypothetical pr...    28   8.0  
L16622-6|AAA27913.2|  408|Caenorhabditis elegans Hypothetical pr...    28   8.0  

>Z69904-5|CAA93778.1|  250|Caenorhabditis elegans Hypothetical
           protein ZK20.5 protein.
          Length = 250

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +1

Query: 46  YTFFMDTLLETVRGEIAACIEKAYHTI 126
           YT F+  +L+T+R EIA  IEK++  +
Sbjct: 157 YTIFIRIMLDTIRREIATSIEKSFKVL 183



 Score = 29.5 bits (63), Expect = 3.5
 Identities = 19/67 (28%), Positives = 33/67 (49%)
 Frame = +2

Query: 137 EAARRLNLSSQQAVLEYGKKRNWRLGPDNCYRFTSEELTSVAFSGILPSAELAQQTIEYA 316
           +A   L   + + + ++G++R W L  +  Y F  E       +  L +  +A QT+ YA
Sbjct: 187 DATVMLLFDNDEQMKKFGQERKWHLDGER-YVFEIEVAQEKPVN--LDTVRVATQTLFYA 243

Query: 317 RHLEMIV 337
           + LE IV
Sbjct: 244 KQLEQIV 250


>U53336-10|AAA96182.2|  125|Caenorhabditis elegans Hypothetical
           protein K07C11.10 protein.
          Length = 125

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
 Frame = +2

Query: 143 ARRLNLSSQQAVLEYGKKRNWRLGPDNCYRFTSEELTSV-AFSGILPSAELAQQTIEYAR 319
           A   N   ++ V+  G+K   +L  D CY F  E LT +     ++P   +  Q +E  +
Sbjct: 19  ATEKNEKQERVVMSQGEKLEEKLFVDECYLFQDETLTPIFCKPKLIPLKTITTQKLEKMQ 78

Query: 320 HLEM 331
             +M
Sbjct: 79  REQM 82


>Z99288-7|CAB63421.1|  362|Caenorhabditis elegans Hypothetical
           protein ZK262.8 protein.
          Length = 362

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
 Frame = +2

Query: 209 LGPDNCYRFTSEELTSVAFSG---ILPSAELAQQTIEYARHLEMIV 337
           LG   CY + + + TS +      ++ + E  ++++EY R LEM++
Sbjct: 294 LGTKRCYEYRATDPTSASERNNELVMSTLEGIRESVEYLRSLEMVL 339


>U97194-5|AAB52448.1|  442|Caenorhabditis elegans Hypothetical
           protein C37A2.3 protein.
          Length = 442

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +2

Query: 230 RFTSEELTSVAFSGILPSAELAQQTIEYAR 319
           +F  E L +VA  G+LP  +   +TIEYAR
Sbjct: 295 QFNDERLVTVAV-GLLPLQKCIDETIEYAR 323


>L16622-6|AAA27913.2|  408|Caenorhabditis elegans Hypothetical
           protein C02D5.1 protein.
          Length = 408

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +2

Query: 230 RFTSEELTSVAFSGILPSAELAQQTIEYAR 319
           +F  E L +VA  G+LP  +   +TIEYAR
Sbjct: 261 QFNDERLVTVAV-GLLPLQKCINETIEYAR 289


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,770,901
Number of Sequences: 27780
Number of extensions: 217927
Number of successful extensions: 480
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 480
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2318293978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)