Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_N21
         (875 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          24   2.1  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      24   2.1  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    24   2.1  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   4.9  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    22   8.5  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -2

Query: 739 FYRLYKHKVSWLPAFKFLNKTFKK 668
           FYR+YK  + +  ++K   K + K
Sbjct: 418 FYRIYKRIIDYYHSYKMHQKPYNK 441


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -2

Query: 739 FYRLYKHKVSWLPAFKFLNKTFKK 668
           FYR+YK  + +  ++K   K + K
Sbjct: 418 FYRIYKRIIDYYHSYKMHQKPYNK 441


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = -3

Query: 375 RLLRPPFRVIFLFHQAQTTNQPSQEFTKSPI-EH*NNCRVQ 256
           R  R PFR I  F  +   +   +EF +S   +  NNC ++
Sbjct: 432 RDFRKPFREILYFRCSNLNHMMREEFYQSQYGDPINNCEIK 472


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -2

Query: 607 KIGNXQNIQKHVFPLEYVSFVIWLLF 530
           KI    N  KH+    Y + VIWL F
Sbjct: 839 KIPEAFNESKHIGFTMYTTCVIWLAF 864


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -1

Query: 326 KPQTNQAKSSPSHQSSIKTTV 264
           KPQT    +SP H S  K  +
Sbjct: 252 KPQTKTKPTSPYHVSDHKAAI 272


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,556
Number of Sequences: 438
Number of extensions: 4719
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28402218
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)