Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_N12
(886 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U21324-8|AAA62561.1| 190|Caenorhabditis elegans Hypothetical pr... 37 0.017
Z68316-2|CAA92681.1| 352|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z81497-6|CAB04082.2| 604|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z75953-5|CAB00102.2| 604|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z72506-5|CAA96616.2| 259|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z77663-10|CAB01204.1| 543|Caenorhabditis elegans Hypothetical p... 28 7.7
U64836-3|AAG24058.1| 175|Caenorhabditis elegans Hypothetical pr... 28 7.7
U61957-5|AAB03417.3| 559|Caenorhabditis elegans Suppressor of c... 28 7.7
U61957-4|AAM81129.1| 558|Caenorhabditis elegans Suppressor of c... 28 7.7
AF068919-1|AAC39129.1| 559|Caenorhabditis elegans Ras-binding p... 28 7.7
AF054827-1|AAC25697.1| 559|Caenorhabditis elegans leucine-rich ... 28 7.7
>U21324-8|AAA62561.1| 190|Caenorhabditis elegans Hypothetical
protein C35D10.5 protein.
Length = 190
Score = 37.1 bits (82), Expect = 0.017
Identities = 18/84 (21%), Positives = 44/84 (52%)
Frame = +2
Query: 422 LYESIHANIVYEEWFEKLELPDTLASWFSITELHVWLLMVRYMAEDIAHTAKEKKTYVKG 601
LY + N + + E L D ++SW+ +T +H W++++R H+ + K Y++
Sbjct: 23 LYYNCADNYDFAKLCEAFGLGDYMSSWYKLTLMHTWMVLMR------LHSEFDGKAYMR- 75
Query: 602 DGHFVRNCIVEALWADVSSRIKLL 673
++ ++ +W D+ +R+ ++
Sbjct: 76 ----LQRGLLSTMWLDIDNRLGIV 95
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/18 (72%), Positives = 15/18 (83%), Gaps = 1/18 (5%)
Frame = +3
Query: 750 YDEG-LSDDKILAAAIWR 800
YDEG L DD++LA AIWR
Sbjct: 123 YDEGFLHDDRVLAGAIWR 140
>Z68316-2|CAA92681.1| 352|Caenorhabditis elegans Hypothetical
protein K08E4.3 protein.
Length = 352
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -3
Query: 404 LNEFC-PDPSIRRLS*TSLHSYLQQQLCCVLDKSYCT 297
L+ FC PDPS + T L Y ++ CC D CT
Sbjct: 233 LSGFCSPDPSFGKPCSTILGDYFSKRFCCKSDPMECT 269
>Z81497-6|CAB04082.2| 604|Caenorhabditis elegans Hypothetical
protein F10C2.3 protein.
Length = 604
Score = 29.5 bits (63), Expect = 3.3
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +2
Query: 341 DSYVKKFMKAVGWMDQDRTRLKLT-GYFLYESIHANIVYEEWFEKLELPDTLASWFSITE 517
D Y + + V W R L G ++ N + + + + P SW +TE
Sbjct: 292 DHYFRPYWLNVYWTYVHRRSRNLCYGNHRMHNLQLNYLSQFVSKYKDQPKFAISW--LTE 349
Query: 518 L-HVWLLMVRYMAEDIAHTAKE 580
L H WL VRY ED+A+ K+
Sbjct: 350 LGHDWLNQVRYGDEDLANFLKK 371
>Z75953-5|CAB00102.2| 604|Caenorhabditis elegans Hypothetical
protein F10C2.3 protein.
Length = 604
Score = 29.5 bits (63), Expect = 3.3
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +2
Query: 341 DSYVKKFMKAVGWMDQDRTRLKLT-GYFLYESIHANIVYEEWFEKLELPDTLASWFSITE 517
D Y + + V W R L G ++ N + + + + P SW +TE
Sbjct: 292 DHYFRPYWLNVYWTYVHRRSRNLCYGNHRMHNLQLNYLSQFVSKYKDQPKFAISW--LTE 349
Query: 518 L-HVWLLMVRYMAEDIAHTAKE 580
L H WL VRY ED+A+ K+
Sbjct: 350 LGHDWLNQVRYGDEDLANFLKK 371
>Z72506-5|CAA96616.2| 259|Caenorhabditis elegans Hypothetical
protein F07A5.4 protein.
Length = 259
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/33 (39%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Frame = +3
Query: 645 LMFLVG-LSY*RVQIHQLQRNKYQSSLNNFKLP 740
L+F +G + Y +QI++LQ N+++ LN+ +LP
Sbjct: 16 LLFSIGWIFYQNIQINELQINRHKRELNSNRLP 48
>Z77663-10|CAB01204.1| 543|Caenorhabditis elegans Hypothetical
protein F53F4.11 protein.
Length = 543
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 458 EWFEKLELPDTLASWFSITELHVWLLMVRYMAEDIAHTAKEKKT 589
EW EK+E+ L T H+ ++ + E IAHT K+K++
Sbjct: 262 EWAEKIEVDHGL------TSAHIAKILTKREVERIAHTYKDKRS 299
>U64836-3|AAG24058.1| 175|Caenorhabditis elegans Hypothetical
protein F10G2.4 protein.
Length = 175
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/47 (21%), Positives = 23/47 (48%)
Frame = +1
Query: 127 Q*NETFTLNKVNFLKSKFINQWKLSQRNKNAEQPSNSPSIVTTTTQN 267
Q +++F ++ + + WK + N +E PS+ + T+T +
Sbjct: 37 QRDDSFNISPASSSPDMLVETWKSDEENAKSESPSSQSTTATSTNDD 83
>U61957-5|AAB03417.3| 559|Caenorhabditis elegans Suppressor of clr
protein 2, isoforma protein.
Length = 559
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 467 EKLELPDTLASWFSITELHVWLLMVRYMAEDI 562
E + LP + SW SITEL++ ++ + EDI
Sbjct: 363 ELVSLPLDMGSWTSITELNLSTNQLKVLPEDI 394
>U61957-4|AAM81129.1| 558|Caenorhabditis elegans Suppressor of clr
protein 2, isoformb protein.
Length = 558
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 467 EKLELPDTLASWFSITELHVWLLMVRYMAEDI 562
E + LP + SW SITEL++ ++ + EDI
Sbjct: 362 ELVSLPLDMGSWTSITELNLSTNQLKVLPEDI 393
>AF068919-1|AAC39129.1| 559|Caenorhabditis elegans Ras-binding
protein SUR-8 protein.
Length = 559
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 467 EKLELPDTLASWFSITELHVWLLMVRYMAEDI 562
E + LP + SW SITEL++ ++ + EDI
Sbjct: 363 ELVSLPLDMGSWTSITELNLSTNQLKVLPEDI 394
>AF054827-1|AAC25697.1| 559|Caenorhabditis elegans leucine-rich
repeat protein SOC-2 protein.
Length = 559
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 467 EKLELPDTLASWFSITELHVWLLMVRYMAEDI 562
E + LP + SW SITEL++ ++ + EDI
Sbjct: 363 ELVSLPLDMGSWTSITELNLSTNQLKVLPEDI 394
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,321,164
Number of Sequences: 27780
Number of extensions: 384215
Number of successful extensions: 841
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 841
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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