Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_N11
         (895 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075264-1|AAL68131.1|  494|Drosophila melanogaster AT23209p pro...    35   0.13 
AE014297-4557|AAN14223.1|  494|Drosophila melanogaster CG15530-P...    30   4.9  
AE014297-4556|AAF57018.2|  494|Drosophila melanogaster CG15530-P...    30   4.9  
AE014296-778|AAX52730.2|  660|Drosophila melanogaster CG33545-PA...    30   4.9  
AE014297-4641|AAN14249.1|  659|Drosophila melanogaster CG31019-P...    29   6.5  

>AY075264-1|AAL68131.1|  494|Drosophila melanogaster AT23209p
           protein.
          Length = 494

 Score = 35.1 bits (77), Expect = 0.13
 Identities = 27/123 (21%), Positives = 52/123 (42%)
 Frame = -2

Query: 657 HHFKNSVAPPTYLGLLILLPVAAASGDKSCLTGLDSRR*LPDKAQRSG*XGGFVHTAQLG 478
           HH    + PP  + + +LLP+   +  ++     D RR   ++  R G  GG  H+A   
Sbjct: 123 HHTTGMITPPNTINMPMLLPMVQTNNLRTTSLQTDRRR--QEEENRRGSRGG-GHSAHQE 179

Query: 477 ANDLHRTEIPTA*AMRKRHASRREKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCQXSP 298
           + D  R         R+   + R     +  ++   +++AH G+S G     + +   +P
Sbjct: 180 SRDTDRKH-------RRERPNWRSVHSDIEREQPSTSKKAHHGSSGGGESRRMSNVVKTP 232

Query: 297 PLT 289
            +T
Sbjct: 233 TIT 235


>AE014297-4557|AAN14223.1|  494|Drosophila melanogaster CG15530-PB,
           isoform B protein.
          Length = 494

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 25/123 (20%), Positives = 51/123 (41%)
 Frame = -2

Query: 657 HHFKNSVAPPTYLGLLILLPVAAASGDKSCLTGLDSRR*LPDKAQRSG*XGGFVHTAQLG 478
           H+    + PP  + + +LLP+   +  ++     D RR   ++  R G   G  H+A   
Sbjct: 123 HYTTGMITPPNTINMPMLLPMVQTNNLRTTSLQTDRRR--QEEENRRG-SRGRGHSAHQE 179

Query: 477 ANDLHRTEIPTA*AMRKRHASRREKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCQXSP 298
           + D  R         R+   + R     +  ++   +++AH G+S G     + +   +P
Sbjct: 180 SQDTDRKH-------RRERPNWRSVHSDIEREQPSTSKKAHHGSSGGGESRRMSNVVKTP 232

Query: 297 PLT 289
            +T
Sbjct: 233 TIT 235


>AE014297-4556|AAF57018.2|  494|Drosophila melanogaster CG15530-PA,
           isoform A protein.
          Length = 494

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 25/123 (20%), Positives = 51/123 (41%)
 Frame = -2

Query: 657 HHFKNSVAPPTYLGLLILLPVAAASGDKSCLTGLDSRR*LPDKAQRSG*XGGFVHTAQLG 478
           H+    + PP  + + +LLP+   +  ++     D RR   ++  R G   G  H+A   
Sbjct: 123 HYTTGMITPPNTINMPMLLPMVQTNNLRTTSLQTDRRR--QEEENRRG-SRGRGHSAHQE 179

Query: 477 ANDLHRTEIPTA*AMRKRHASRREKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCQXSP 298
           + D  R         R+   + R     +  ++   +++AH G+S G     + +   +P
Sbjct: 180 SQDTDRKH-------RRERPNWRSVHSDIEREQPSTSKKAHHGSSGGGESRRMSNVVKTP 232

Query: 297 PLT 289
            +T
Sbjct: 233 TIT 235


>AE014296-778|AAX52730.2|  660|Drosophila melanogaster CG33545-PA
           protein.
          Length = 660

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 18/43 (41%), Positives = 23/43 (53%)
 Frame = +1

Query: 337 PPGSSLVRSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 465
           P GSS + SPVP  PL    SA +P+ +V L+    C    SV
Sbjct: 263 PSGSSFMPSPVPPAPLPA--SASVPAPTVPLATQISCPSAPSV 303


>AE014297-4641|AAN14249.1|  659|Drosophila melanogaster CG31019-PA
           protein.
          Length = 659

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = -2

Query: 396 QVSGKRQGRNRRAHEGASRGK 334
           +V  KR+GRNR AH   SR K
Sbjct: 491 EVRSKRRGRNRHAHHSRSRSK 511


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,284,072
Number of Sequences: 53049
Number of extensions: 925076
Number of successful extensions: 2888
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2888
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4341591036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)