Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_N01
(884 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces pomb... 47 4e-06
SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces p... 44 4e-05
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 43 7e-05
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 43 7e-05
SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit Prw1... 42 1e-04
SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2 |... 42 2e-04
SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces ... 41 2e-04
SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomy... 40 6e-04
SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces... 39 0.001
SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyce... 38 0.003
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 37 0.004
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 36 0.006
SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyc... 36 0.010
SPBC713.05 |||WD repeat protein, human MAPK organizer 1 |Schizos... 35 0.013
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 35 0.018
SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein Pop2|Schizosacchar... 34 0.031
SPAC4D7.05 |sum1|tif34|translation initiation factor eIF3i|Schiz... 34 0.031
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 34 0.031
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 34 0.031
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 33 0.041
SPBC646.17c |dic1|SPBC855.01c, SPBP35G2.01c, mug44|dynein interm... 33 0.054
SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein Pof11|Schizos... 33 0.054
SPBC215.15 |sec13||COPII-coated vesicle component Sec13|Schizosa... 33 0.071
SPAC343.04c |gnr1||heterotrimeric G protein beta subunit Gnr1|Sc... 33 0.071
SPAC31A2.14 |||WD repeat protein, human WRDR48 family|Schizosacc... 32 0.094
SPCC126.01c ||SPCC576.18c|conserved fungal protein|Schizosacchar... 32 0.094
SPAC2E1P5.05 |||U3 snoRNP-associated protein Rrp9 |Schizosacchar... 32 0.12
SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4 family|S... 31 0.17
SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomy... 31 0.22
SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1 |Schizosaccharo... 31 0.22
SPBC17D11.08 |||WD repeat protein, human WDR68 family|Schizosacc... 31 0.22
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 31 0.22
SPAC890.04c |||ribosome biogenesis protein Ytm1 |Schizosaccharom... 31 0.22
SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr 2|||... 31 0.29
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 30 0.50
SPAC13G7.08c |crb3||WD repeat protein Crb3|Schizosaccharomyces p... 29 0.67
SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyce... 29 0.88
SPBC16D10.05 |mok13||alpha-1,3-glucan synthase Mok13|Schizosacch... 29 0.88
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 29 1.2
SPAC890.07c |rmt1|prmt1|type I protein arginine N-methyltransfer... 28 1.5
SPAC18G6.13 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 28 2.0
SPBP19A11.07c ||SPBP4H10.02c|human down-regulated in multiple ca... 27 2.7
SPCC1235.09 |||histone deacetylase complex subunit|Schizosacchar... 27 2.7
SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces pomb... 27 3.6
SPAC17H9.19c |cdt2|sev1|WD repeat protein Cdt2|Schizosaccharomyc... 27 3.6
SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual 27 4.7
SPBC2A9.03 |||conserved protein |Schizosaccharomyces pombe|chr 2... 27 4.7
SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6 family|Schi... 27 4.7
SPBC16C6.09 |ogm4|oma4|protein O-mannosyltransferase Ogm4|Schizo... 26 6.2
SPAC24B11.13 |hem3|SPAC806.01|hydroxymethylbilane synthase|Schiz... 26 6.2
SPAC9G1.05 |||actin cortical patch component Aip1 |Schizosacchar... 26 6.2
SPAC343.17c |||WD repeat protein, human WDR70 family|Schizosacch... 26 6.2
SPBC1271.10c |||membrane transporter|Schizosaccharomyces pombe|c... 26 8.2
>SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 605
Score = 46.8 bits (106), Expect = 4e-06
Identities = 43/133 (32%), Positives = 64/133 (48%)
Frame = +1
Query: 373 NEKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGRWNVTSILK 552
N +T + +++L HT V + + +T L+S S D T +W G+ +T L+
Sbjct: 339 NYRTSECISILHGHTDSVLCLTF------DSTLLVSGSADCTVKLWHFSGGK-RIT--LR 389
Query: 553 GHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWERIEGTVTLKQSISLHSGLCLTLHAQIL 732
GHT V ++ DR V + S DSTIK+W +E T T + S H G Q L
Sbjct: 390 GHTGPVNSV--RIIRDRGLVLSGSDDSTIKIWS-LE-TNTCLHTFSAHIG-----PVQSL 440
Query: 733 PCANKPLLLCALD 771
A+ L C+LD
Sbjct: 441 ALADSRLFSCSLD 453
Score = 40.3 bits (90), Expect = 4e-04
Identities = 26/71 (36%), Positives = 35/71 (49%)
Frame = +1
Query: 466 TELLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKV 645
+ L SCS+D T W ++ + T L GH EGV I D L + + + D +KV
Sbjct: 445 SRLFSCSLDGTIKQWDIEKKKCVHT--LFGHIEGVWEIAA----DHLRLISGAHDGVVKV 498
Query: 646 WERIEGTVTLK 678
WE E TLK
Sbjct: 499 WEACECVHTLK 509
>SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1323
Score = 43.6 bits (98), Expect = 4e-05
Identities = 33/134 (24%), Positives = 56/134 (41%)
Frame = +1
Query: 370 PNEKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGRWNVTSIL 549
PN++ + +L HT V + W H N L +CS+D + W L++ R+ V S
Sbjct: 309 PNDRAIE--FMLHGHTRAVTDMNW-HRQNPDV--LATCSIDSSVHCWDLRSPRFPVNSFY 363
Query: 550 KGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWERIEGTVTLKQSISLHSGLCLTLHAQI 729
H G T + NY + +S +++W+ G+ L +I + +
Sbjct: 364 DWH-NGATQVKWNYKNPH--ILASSHGRLVRIWDDRYGSAPL-HTIKTSENITKINGLEF 419
Query: 730 LPCANKPLLLCALD 771
LL CA+D
Sbjct: 420 NRACETRLLTCAMD 433
>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1207
Score = 42.7 bits (96), Expect = 7e-05
Identities = 26/78 (33%), Positives = 43/78 (55%)
Frame = +1
Query: 418 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNIYGNYHG 597
GH++ V+ H+ + +LSCS D+T IW Q+ N +IL GH+ V + +H
Sbjct: 93 GHMDYVRVCTFHH-EYPWILSCSDDQTIRIWNWQSR--NCIAILTGHSHYV--MCAAFHP 147
Query: 598 DRLTVYTASTDSTIKVWE 651
+ +AS D T++VW+
Sbjct: 148 SEDLIVSASLDQTVRVWD 165
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 42.7 bits (96), Expect = 7e-05
Identities = 32/90 (35%), Positives = 46/90 (51%)
Frame = +1
Query: 397 TVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTN 576
T+ H+ G ++ VKW + L S S DKT IW + R +V LKGHT V++
Sbjct: 91 TLFGHYRG-ISQVKWATG----SKYLASASDDKTIRIWDFEK-RCSVRC-LKGHTNYVSS 143
Query: 577 IYGNYHGDRLTVYTASTDSTIKVWERIEGT 666
I N G L + S D T+++W +GT
Sbjct: 144 IDFNPLGTLLV--SGSWDETVRIWNLQDGT 171
Score = 41.1 bits (92), Expect = 2e-04
Identities = 28/90 (31%), Positives = 45/90 (50%)
Frame = +1
Query: 394 VTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVT 573
V L HT +V+S+ + N T L+S S D+T IW LQ+G +L H+E +
Sbjct: 131 VRCLKGHTNYVSSIDF----NPLGTLLVSGSWDETVRIWNLQDG--TCLRMLPAHSEPII 184
Query: 574 NIYGNYHGDRLTVYTASTDSTIKVWERIEG 663
++ + D TAS D ++W+ + G
Sbjct: 185 SV--SISADGTLCATASYDGMARIWDVLSG 212
Score = 25.8 bits (54), Expect = 8.2
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +1
Query: 547 LKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWERI 657
L GH + VT + + ++ + T+S+D TIK+W +
Sbjct: 50 LFGHEKSVTCV--SVSPNKRWIATSSSDGTIKIWSAL 84
>SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit
Prw1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 431
Score = 41.9 bits (94), Expect = 1e-04
Identities = 31/94 (32%), Positives = 50/94 (53%)
Frame = +1
Query: 370 PNEKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGRWNVTSIL 549
P+ TK +V +H +G ++SV + + HN L +CS DKT +W L+N + + L
Sbjct: 267 PDASTKPARSVHAH-SGPIHSVAF-NPHNDFI--LATCSTDKTIALWDLRNLNQRLHT-L 321
Query: 550 KGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWE 651
+GH + VT I + H + + T S D VW+
Sbjct: 322 EGHEDIVTKISFSPHEEPILAST-SADRRTLVWD 354
>SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 760
Score = 41.5 bits (93), Expect = 2e-04
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +1
Query: 280 VACNRKPEVVDWNYEGIICYGACNAVVVCDPNEKTKDRVTVLSHHTGHVNSV-KWIHNHN 456
V CNR P W+ + YGA + V DP K+ +++ H+G +N V + N
Sbjct: 9 VGCNRIPTAATWSSNLGLIYGAERLIAVADP---FKEINYLMAGHSGRINCVCELATNSE 65
Query: 457 GQTTELLSCSVDKTAVIWTLQ 519
++ +LS + DKT +W L+
Sbjct: 66 YRSPFILSGASDKTLRLWQLE 86
Score = 30.3 bits (65), Expect = 0.38
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Frame = +1
Query: 499 AVIWTLQNGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWERIEGTVTLK 678
AVI + WN +LKGH+ VT I + D + +A D + + E+ E +
Sbjct: 558 AVIRLYETQSWNQQQVLKGHSLTVTTI--KFSPDDRYILSAGRDRLVCLHEQAENLLDYN 615
Query: 679 Q--SISLHS 699
SI HS
Sbjct: 616 NFASIKAHS 624
Score = 26.6 bits (56), Expect = 4.7
Identities = 13/52 (25%), Positives = 24/52 (46%)
Frame = +1
Query: 505 IWTLQNGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWERIE 660
+W G+W + GHT+ V + + G +A TD T +++ R +
Sbjct: 352 LWKQDAGQWLQLPSISGHTKSVKGVAWDPEGK--FYLSAGTDQTTRLFARFK 401
>SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 314
Score = 41.1 bits (92), Expect = 2e-04
Identities = 37/132 (28%), Positives = 69/132 (52%), Gaps = 7/132 (5%)
Frame = +1
Query: 418 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTL-QNGRWNVTSILKGHTEGVTNIYGNYH 594
GH + V + + + +++S S DKT IW + N ++ +T GH++ V+ + + +
Sbjct: 103 GHTSDVLSV-SISPDNRQVVSGSRDKTIKIWNIIGNCKYTITD--GGHSDWVSCVRFSPN 159
Query: 595 GDRLTVYTASTDSTIKVWERIEGTVTLKQSISLHSGL--CLTLHAQILPCA----NKPLL 756
D LT +A D +KVW+ +E T +L+ S H+G +T+ CA + L+
Sbjct: 160 PDNLTFVSAGWDKAVKVWD-LE-TFSLRTSHYGHTGYVSAVTISPDGSLCASGGRDGTLM 217
Query: 757 LCALDDPKYIYS 792
L L++ ++YS
Sbjct: 218 LWDLNESTHLYS 229
Score = 37.9 bits (84), Expect = 0.002
Identities = 23/61 (37%), Positives = 30/61 (49%)
Frame = +1
Query: 475 LSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWER 654
LS S DKT +W L+ G T GHT V ++ + D V + S D TIK+W
Sbjct: 79 LSASWDKTIRLWDLEKG--ECTHQFVGHTSDVLSV--SISPDNRQVVSGSRDKTIKIWNI 134
Query: 655 I 657
I
Sbjct: 135 I 135
Score = 30.7 bits (66), Expect = 0.29
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Frame = +1
Query: 472 LLSCSVDKTAVIWTLQNGRWN---VTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIK 642
LLS S DK+ ++W L N L GH+ V++ ++ D +AS D TI+
Sbjct: 31 LLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVSDCALSF--DSHYALSASWDKTIR 88
Query: 643 VWERIEGTVT 672
+W+ +G T
Sbjct: 89 LWDLEKGECT 98
>SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 314
Score = 39.5 bits (88), Expect = 6e-04
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +1
Query: 472 LLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWE 651
L +CS D T IW+ ++ + + L+GH V + + D + TAS+D ++WE
Sbjct: 230 LATCSADATVNIWSTEDMSFMLERRLQGHQRWVWDC--AFSADSTYLVTASSDHVARLWE 287
Query: 652 RIEGTVTLKQSISLH-SGLCLTLH 720
G T++Q H + +C+ L+
Sbjct: 288 LSSGE-TIRQYSGHHKAAVCVALN 310
Score = 31.5 bits (68), Expect = 0.17
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +1
Query: 550 KGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWE 651
+GHT VT I +H D + T+S D T+KVW+
Sbjct: 80 EGHTNNVTAIA--FHCDGKWLATSSEDGTVKVWD 111
>SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 796
Score = 38.7 bits (86), Expect = 0.001
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Frame = +1
Query: 418 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNIYGNYH- 594
GH V + + T S +D T +W+ + N T L+ H GV Y NY+
Sbjct: 139 GHSRYVMSLAINPKDTNTFASSCLDGTVKVWSFGSSVANFT--LQAHDRGVN--YVNYYP 194
Query: 595 -GDRLTVYTASTDSTIKVWE 651
GD+ + TA D+ IKVW+
Sbjct: 195 AGDKPYLITAGDDNLIKVWD 214
Score = 37.5 bits (83), Expect = 0.003
Identities = 22/98 (22%), Positives = 42/98 (42%), Gaps = 1/98 (1%)
Frame = +1
Query: 421 HVNSVKWIHNHN-GQTTELLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNIYGNYHG 597
H V +++ + G L++ D +W Q IL+GHT V+ + +H
Sbjct: 183 HDRGVNYVNYYPAGDKPYLITAGDDNLIKVWDYQTKA--CVRILEGHTNNVS--FAFFHS 238
Query: 598 DRLTVYTASTDSTIKVWERIEGTVTLKQSISLHSGLCL 711
+ + S D T+K+W + ++ + SL C+
Sbjct: 239 KFPIIISGSEDGTVKIWHTLSYSLIKSYNFSLDRAWCI 276
>SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 473
Score = 37.5 bits (83), Expect = 0.003
Identities = 29/107 (27%), Positives = 49/107 (45%)
Frame = +1
Query: 400 VLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNI 579
V+ H+ GH++ V + H L++ D A +W ++ R NV +L GH V ++
Sbjct: 239 VIRHYHGHLSGVYALKLHPTLDV-LVTAGRDAVARVWDMRT-RQNV-HVLSGHKSTVASL 295
Query: 580 YGNYHGDRLTVYTASTDSTIKVWERIEGTVTLKQSISLHSGLCLTLH 720
+ V T S DSTI++W+ G + + L+LH
Sbjct: 296 AVQEFDPQ--VVTGSMDSTIRLWDLAAGKTLTTLTHHKKTVRALSLH 340
Score = 29.1 bits (62), Expect = 0.88
Identities = 19/81 (23%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Frame = +1
Query: 529 WNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWERIEGT--VTLKQSISLHSG 702
W + ++ GH V + + T + D TIK+W+ G +TL I+ G
Sbjct: 153 WTLMRVISGHLGWVRCV--DVEPGNQWFCTGAGDRTIKIWDLASGVLKLTLTGHIATVRG 210
Query: 703 LCLT-LHAQILPCANKPLLLC 762
L ++ H + C ++ C
Sbjct: 211 LAVSPRHPYLFSCGEDKMVKC 231
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 36.7 bits (81), Expect = 0.004
Identities = 41/133 (30%), Positives = 59/133 (44%), Gaps = 13/133 (9%)
Frame = +1
Query: 340 GACNAVVVCDPNEKTK--DRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIW- 510
GA A+ V NE+ K D+V + HT V W H+ L S D +IW
Sbjct: 54 GAGGALAVIPLNERGKLPDQVNLFRGHTAAVLDTDWNPFHD---QVLASGGDDSKIMIWK 110
Query: 511 -----TLQNGRWNVTSI--LKGHTEGVTNIYGNYHGDRLTVYTAST-DSTIKVWERIEGT 666
T+ +V I LKGH+ V + YH V +S+ D+TIK+W+ +G
Sbjct: 111 VPEDYTVMEPYEDVHPIAELKGHSRKVGLV--QYHPTAANVLASSSADNTIKLWDCEKGV 168
Query: 667 --VTLKQSISLHS 699
V+LK + S
Sbjct: 169 AHVSLKMDVMCQS 181
Score = 31.1 bits (67), Expect = 0.22
Identities = 18/78 (23%), Positives = 33/78 (42%)
Frame = +1
Query: 418 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNIYGNYHG 597
GH V + H L S S D T +W + G +V+ + + + +++
Sbjct: 132 GHSRKVGLVQYHPTAANVLASSSADNTIKLWDCEKGVAHVSLKMDVMCQSM-----SFNA 186
Query: 598 DRLTVYTASTDSTIKVWE 651
D + T S D ++VW+
Sbjct: 187 DGTRLVTTSRDKKVRVWD 204
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 36.3 bits (80), Expect = 0.006
Identities = 23/69 (33%), Positives = 33/69 (47%)
Frame = +1
Query: 373 NEKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGRWNVTSILK 552
N K + + LS HT + V+W G + S S DKT IW ++G+ ILK
Sbjct: 255 NVKLRTLLFTLSGHTAPITCVRW-----GGQNWIYSSSYDKTIRIWDAKDGK--CLHILK 307
Query: 553 GHTEGVTNI 579
GH V ++
Sbjct: 308 GHAARVNHL 316
Score = 34.3 bits (75), Expect = 0.023
Identities = 25/99 (25%), Positives = 50/99 (50%)
Frame = +1
Query: 355 VVVCDPNEKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGRWN 534
+++ DP + TK +T + H VN + + +G+ + + S D + +W + G++
Sbjct: 370 LILWDPQKSTKP-ITKMHGHQKVVNHASF--SPDGRC--IATASFDSSVRLWDGKTGKFL 424
Query: 535 VTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWE 651
T L+GH V + D + ++S D+T+KVW+
Sbjct: 425 AT--LRGHVAAVYQCA--WSTDSRLLVSSSQDTTLKVWD 459
Score = 31.9 bits (69), Expect = 0.12
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = +1
Query: 472 LLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWE 651
L+S S D ++W Q +T + GH + V + ++ D + TAS DS++++W+
Sbjct: 361 LVSASDDLQLILWDPQKSTKPITK-MHGHQKVVN--HASFSPDGRCIATASFDSSVRLWD 417
Score = 30.3 bits (65), Expect = 0.38
Identities = 22/83 (26%), Positives = 39/83 (46%)
Frame = +1
Query: 418 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNIYGNYHG 597
GH ++ ++ L++ S D TA +W T +KGHT V+ + +
Sbjct: 132 GHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIAT--MKGHTNWVSCVA--WAP 187
Query: 598 DRLTVYTASTDSTIKVWERIEGT 666
D + T S D+TI+ W+ +G+
Sbjct: 188 DASIIATGSMDNTIRFWDPKKGS 210
>SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 430
Score = 35.5 bits (78), Expect = 0.010
Identities = 24/84 (28%), Positives = 43/84 (51%)
Frame = +1
Query: 400 VLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNI 579
V+ H+ +N+V I+ N L + S DKT +W L+N + L+GH + V +
Sbjct: 276 VIQAHSKAINAVA-INPFNDYL--LATASADKTVALWDLRN-PYQRLHTLEGHEDEVYGL 331
Query: 580 YGNYHGDRLTVYTASTDSTIKVWE 651
+ H D + ++STD + +W+
Sbjct: 332 EWSPH-DEPILASSSTDRRVCIWD 354
Score = 26.6 bits (56), Expect = 4.7
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +3
Query: 804 YHRAHTLVGHXDWVRGLD 857
Y R HTL GH D V GL+
Sbjct: 315 YQRLHTLEGHEDEVYGLE 332
>SPBC713.05 |||WD repeat protein, human MAPK organizer 1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 35.1 bits (77), Expect = 0.013
Identities = 29/116 (25%), Positives = 51/116 (43%)
Frame = +1
Query: 304 VVDWNYEGIICYGACNAVVVCDPNEKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSC 483
VV +N G A N VV N K+ + + H + + +++ +T+ SC
Sbjct: 19 VVKYNRTGKYVLAAGNERVVRLWNVKSGACIHEYAGHGHEILDLDLVYD----STKFASC 74
Query: 484 SVDKTAVIWTLQNGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWE 651
DK +W + G+ V L GH + I Y+ D + + S DS +++W+
Sbjct: 75 GGDKFIQVWDVNTGK--VDRRLGGHLAQINTI--RYNEDSSILASGSFDSKVRLWD 126
Score = 32.7 bits (71), Expect = 0.071
Identities = 26/111 (23%), Positives = 51/111 (45%)
Frame = +1
Query: 340 GACNAVVVCDPNEKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQ 519
G + V D N DR L H +N++++ N ++ L S S D +W +
Sbjct: 75 GGDKFIQVWDVNTGKVDRR--LGGHLAQINTIRY----NEDSSILASGSFDSKVRLWDCR 128
Query: 520 NGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWERIEGTVT 672
+ ++ +L + V++I H + T STD T++ ++ +GT++
Sbjct: 129 SNSFSPIQVLADAKDSVSSIDIAEH----LIVTGSTDGTLRTYDIRKGTLS 175
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 34.7 bits (76), Expect = 0.018
Identities = 30/124 (24%), Positives = 56/124 (45%), Gaps = 2/124 (1%)
Frame = +1
Query: 382 TKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGRWNVTSILKGHT 561
+KD + + + GH N+ W + + S D+TA +W +++ + GH
Sbjct: 431 SKDTKSTIVKYAGH-NAPIWDVQFSPFGYYFATASHDQTARLWDVEHAA--PLRVFVGHQ 487
Query: 562 EGVTNIYGNYHGDRLTVYTASTDSTIKVWE-RIEGTV-TLKQSISLHSGLCLTLHAQILP 735
V + ++H + + T S+D T ++W+ R GTV S S LC++ L
Sbjct: 488 NDVDCV--SFHPNAAYLATGSSDHTTRMWDVRTGGTVRVFNAHHSPVSALCMSADGLSLA 545
Query: 736 CANK 747
A++
Sbjct: 546 SADE 549
>SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein
Pop2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 703
Score = 33.9 bits (74), Expect = 0.031
Identities = 21/59 (35%), Positives = 33/59 (55%)
Frame = +1
Query: 475 LSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWE 651
+S S+DK+ +W L G +L+GH VT + N +RL + S DSTI++W+
Sbjct: 563 ISGSMDKSIRVWDLSTGTCKY--VLEGHDAFVTLL--NVFQNRLI--SGSADSTIRIWD 615
Score = 27.1 bits (57), Expect = 3.6
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +1
Query: 418 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGRWNVTSILKGH 558
GH V + H L+S S+DKT +W ++ + T I +GH
Sbjct: 389 GHKEGVWAVKIHENT---LVSGSIDKTVRVWNIEKAK--CTHIFRGH 430
>SPAC4D7.05 |sum1|tif34|translation initiation factor
eIF3i|Schizosaccharomyces pombe|chr 1|||Manual
Length = 328
Score = 33.9 bits (74), Expect = 0.031
Identities = 22/87 (25%), Positives = 41/87 (47%)
Frame = +1
Query: 391 RVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGV 570
R +L H + +K+ NH+G L SC+ DK +W NG T +GHT +
Sbjct: 2 RPIILQGHERPLTQIKY--NHDGDL--LFSCAKDKVINVWFSHNGERLGT--YEGHTGAI 55
Query: 571 TNIYGNYHGDRLTVYTASTDSTIKVWE 651
+ + + + + D+T+++W+
Sbjct: 56 WTC--DINKSSTLMVSGAADNTMRLWD 80
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 33.9 bits (74), Expect = 0.031
Identities = 22/75 (29%), Positives = 38/75 (50%)
Frame = +1
Query: 484 SVDKTAVIWTLQNGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWERIEG 663
S+D+ +W++ + L+GH E V +I + D + + S D TIKVWE ++
Sbjct: 462 SLDQIIRVWSVSG---TLVERLEGHKESVYSIA--FSPDSSILLSGSLDKTIKVWE-LQA 515
Query: 664 TVTLKQSISLHSGLC 708
T ++ S G+C
Sbjct: 516 TRSVGLSAIKPEGIC 530
Score = 31.1 bits (67), Expect = 0.22
Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Frame = +1
Query: 400 VLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGRWNVTSILKGHTE-GVTN 576
V S H + S+ + +HNG+ ++S S D+TA +W ++ G+ ILK E GVT
Sbjct: 397 VFSGHEQDIYSLDF--SHNGRF--IVSGSGDRTARLWDVETGQ----CILKLEIENGVTA 448
Query: 577 IYGNYHGDRLTVYTASTDSTIKVWERIEGTV 669
I + + + V S D I+VW + GT+
Sbjct: 449 IAISPNDQFIAV--GSLDQIIRVWS-VSGTL 476
Score = 30.3 bits (65), Expect = 0.38
Identities = 26/79 (32%), Positives = 36/79 (45%)
Frame = +1
Query: 397 TVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTN 576
T++ GH SV I + ++ LLS S+DKT +W LQ R S +K EG+
Sbjct: 475 TLVERLEGHKESVYSIA-FSPDSSILLSGSLDKTIKVWELQATRSVGLSAIK--PEGICK 531
Query: 577 IYGNYHGDRLTVYTASTDS 633
H D + S DS
Sbjct: 532 ATYTGHTDFVLSVAVSPDS 550
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 33.9 bits (74), Expect = 0.031
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = +1
Query: 502 VIWTLQNGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWERIEG--TVTL 675
++W Q+ + + + H + ++ + Y D + T + D IKVW+ G VT
Sbjct: 322 LVWEWQSESYVLKQ--QSHYDALSTL--QYSSDGQRIITGADDGKIKVWDMNSGFCIVTF 377
Query: 676 KQSISLHSGLCLTLHAQIL 732
Q S SGLC + +L
Sbjct: 378 TQHTSAVSGLCFSKRGNVL 396
Score = 31.9 bits (69), Expect = 0.12
Identities = 22/80 (27%), Positives = 38/80 (47%)
Frame = +1
Query: 412 HTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNIYGNY 591
+TGH + + I + + + +S S D TA + ++ L GH V + G +
Sbjct: 142 YTGHFDDIVSI-SWSADSRFFISTSKDLTARLHSVDPIEGFHPCALTGHKNTVVS--GFF 198
Query: 592 HGDRLTVYTASTDSTIKVWE 651
D+ T+YT S D + VW+
Sbjct: 199 SKDQQTIYTVSKDGALFVWK 218
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 33.5 bits (73), Expect = 0.041
Identities = 23/75 (30%), Positives = 36/75 (48%)
Frame = +1
Query: 484 SVDKTAVIWTLQNGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWERIEG 663
S+DK IWT + L GH E V ++ + G L + S D+TIK+WE ++
Sbjct: 436 SLDKVIRIWTSSG---TLVEQLHGHEESVYSVAFSPDGKYLV--SGSLDNTIKLWE-LQC 489
Query: 664 TVTLKQSISLHSGLC 708
+ S+ G+C
Sbjct: 490 VSNVAPSMYKEGGIC 504
>SPBC646.17c |dic1|SPBC855.01c, SPBP35G2.01c, mug44|dynein
intermediate chain Dic1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 544
Score = 33.1 bits (72), Expect = 0.054
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +1
Query: 505 IWTLQNGRWNV---TSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWE 651
+W L+ G++ V T I GH E VT+I + + T STD + +WE
Sbjct: 270 LWDLRQGQYPVSFTTIISGGHLEPVTDITYINNPPSNNIVTCSTDGLVHIWE 321
>SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein
Pof11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 506
Score = 33.1 bits (72), Expect = 0.054
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +1
Query: 472 LLSCSVDKTAVIWTLQ--NGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKV 645
++S S D TA +W L + +L+GH V ++ Y + TAS+D T++
Sbjct: 316 IISSSRDHTARVWRLDATSPAEACMHVLRGHLASVNSV--QYSSKTGLIVTASSDRTLRT 373
Query: 646 WERIEG 663
W+ G
Sbjct: 374 WDITTG 379
>SPBC215.15 |sec13||COPII-coated vesicle component
Sec13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 32.7 bits (71), Expect = 0.071
Identities = 24/103 (23%), Positives = 43/103 (41%)
Frame = +1
Query: 472 LLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWE 651
L +CS D+T +++++N + + L+GH+ V + + + +AS D + VW
Sbjct: 24 LATCSSDQTIKVFSIENNQQTLLETLRGHSGPVWQLGWAHPKFGTILASASYDGHVIVWR 83
Query: 652 RIEGTVTLKQSISLHSGLCLTLHAQILPCANKPLLLCALDDPK 780
G + + H + P LL CA D K
Sbjct: 84 ETGGVWSELMDHTAHQASVNAV--SWAPHEYGALLACASSDGK 124
Score = 32.7 bits (71), Expect = 0.071
Identities = 23/83 (27%), Positives = 32/83 (38%)
Frame = +1
Query: 403 LSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNIY 582
L H+G V + W H G T L S S D ++W G W+ H V +
Sbjct: 49 LRGHSGPVWQLGWAHPKFG--TILASASYDGHVIVWRETGGVWSELMDHTAHQASVNAVS 106
Query: 583 GNYHGDRLTVYTASTDSTIKVWE 651
H + AS+D + V E
Sbjct: 107 WAPHEYGALLACASSDGKVSVLE 129
Score = 29.1 bits (62), Expect = 0.88
Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Frame = +1
Query: 403 LSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQ-NGRWNVTSI 546
L+ H V W + T L S S DK IWT + +G W T +
Sbjct: 201 LAGHVDWTRDVAWAPSVGLTKTYLASASQDKNVFIWTKEGDGPWQKTPL 249
>SPAC343.04c |gnr1||heterotrimeric G protein beta subunit
Gnr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 32.7 bits (71), Expect = 0.071
Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 1/126 (0%)
Frame = +1
Query: 418 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNIYGNYHG 597
GH+++V +I + LLSCS DK+ ++W G L+ + G + +
Sbjct: 253 GHIDTVAYIR-WSPDDRYLLSCSCDKSVILWDAFTG-----EKLRDYKHGFSVSCCCWLP 306
Query: 598 DRLTVYTASTDSTIKVWERIEGTVTLK-QSISLHSGLCLTLHAQILPCANKPLLLCALDD 774
D L+ T S D I W + G + K + ++++ + LT L L+ A D
Sbjct: 307 DGLSFITGSPDCHITHWS-LNGEILYKWEDVNIYD-MALTSDGTKLYIVGFEQLINAEDK 364
Query: 775 PKYIYS 792
IYS
Sbjct: 365 HIAIYS 370
>SPAC31A2.14 |||WD repeat protein, human WRDR48
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 962
Score = 32.3 bits (70), Expect = 0.094
Identities = 21/91 (23%), Positives = 36/91 (39%)
Frame = +1
Query: 379 KTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGRWNVTSILKGH 558
K + + H+ VN + H+ G ++SCS D T +W + S + H
Sbjct: 67 KASQPLAKIQAHSAWVNDIALTHDSEG----VISCSSDSTVKLWKPHVLNASCLSTIGEH 122
Query: 559 TEGVTNIYGNYHGDRLTVYTASTDSTIKVWE 651
T+ V + + V + D I VW+
Sbjct: 123 TDYVKRVSIPKYSKSPLVASGGLDKRIIVWD 153
Score = 32.3 bits (70), Expect = 0.094
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +1
Query: 547 LKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVW 648
L GHT+ V +I D T+ TAS+D+TIK+W
Sbjct: 212 LVGHTDNVRDIL--ISDDGRTILTASSDATIKLW 243
>SPCC126.01c ||SPCC576.18c|conserved fungal
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 369
Score = 32.3 bits (70), Expect = 0.094
Identities = 23/92 (25%), Positives = 41/92 (44%)
Frame = +1
Query: 373 NEKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGRWNVTSILK 552
N T + V L HT +V + + LLS S D + ++W + + + L
Sbjct: 118 NVSTGECVETLIGHTDYVKCLLLLEEEG----LLLSGSTDASLIVWDVSSQPSRLLYKLT 173
Query: 553 GHTEGVTNIYGNYHGDRLTVYTASTDSTIKVW 648
GH+ G+ I + D +T ++S+I+ W
Sbjct: 174 GHSRGIECITRQPNTD--IFWTCGSESSIRCW 203
Score = 30.3 bits (65), Expect = 0.38
Identities = 23/84 (27%), Positives = 37/84 (44%)
Frame = +1
Query: 418 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNIYGNYHG 597
GH ++V + + L + S DKT W+L G T + H + T++ G
Sbjct: 220 GHQSNVYCLLFDPQDSEALWTASADKTVREWSLYQGIHEETRM--EHPDVCTDVLTLADG 277
Query: 598 DRLTVYTASTDSTIKVWERIEGTV 669
+ + TA D I+VW+ G V
Sbjct: 278 N---IATACRDEEIRVWDTTTGNV 298
>SPAC2E1P5.05 |||U3 snoRNP-associated protein Rrp9
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 524
Score = 31.9 bits (69), Expect = 0.12
Identities = 23/94 (24%), Positives = 43/94 (45%), Gaps = 2/94 (2%)
Frame = +1
Query: 385 KDRVTVLSHHTG--HVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGRWNVTSILKGH 558
+D VT+ H H ++V + G T E+ SCS D++ +W+L + + L GH
Sbjct: 235 RDSVTLEPQHCWKHHRDAVMGLAMRRG-TNEMFSCSADRSIKVWSLD--QMSYIETLFGH 291
Query: 559 TEGVTNIYGNYHGDRLTVYTASTDSTIKVWERIE 660
+ + + + V D T ++W+ +E
Sbjct: 292 QDVIFGV--DALARERCVSVGGRDRTSRLWKIVE 323
>SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 462
Score = 31.5 bits (68), Expect = 0.17
Identities = 21/72 (29%), Positives = 37/72 (51%)
Frame = +1
Query: 490 DKTAVIWTLQNGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWERIEGTV 669
D IW L++G+ +L H + + + +G +L T+S D T+K+W+ + V
Sbjct: 328 DAIGRIWDLRSGK--SIMVLDEHIRQIVAMAWSPNGYQLA--TSSADDTVKIWDLRK--V 381
Query: 670 TLKQSISLHSGL 705
+L +I HS L
Sbjct: 382 SLAHTIPAHSSL 393
>SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 922
Score = 31.1 bits (67), Expect = 0.22
Identities = 15/60 (25%), Positives = 27/60 (45%)
Frame = +1
Query: 472 LLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWE 651
L++CS DK IW L G + + H + + + + D +T S D ++ W+
Sbjct: 591 LVTCSADKNVKIWGLDFG--DCHKSIFAHQDSIMEV--TFQPDTYNFFTCSKDREVRYWD 646
>SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 651
Score = 31.1 bits (67), Expect = 0.22
Identities = 20/56 (35%), Positives = 33/56 (58%)
Frame = +1
Query: 532 NVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWERIEGTVTLKQSISLHS 699
N+ + H+E +T++ ++ T+ TASTD T+KVW+ + G V L S+ HS
Sbjct: 323 NLVKQFQAHSEYITSL--DFSHPFGTLATASTDKTVKVWD-MAGVVYL-GSLKGHS 374
>SPBC17D11.08 |||WD repeat protein, human WDR68
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 435
Score = 31.1 bits (67), Expect = 0.22
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Frame = +1
Query: 403 LSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQ---NGRWNVTSILKGHTEGVT 573
L H G VN+VKW+ G ++L +C D +W L N T + G T G+T
Sbjct: 311 LRGHKGDVNAVKWM---PGSKSKLATCGDDCVVSLWDLDQPVNPSPAPTLSVSGTTPGMT 367
Query: 574 NIYGNY 591
Y
Sbjct: 368 GSTSEY 373
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 31.1 bits (67), Expect = 0.22
Identities = 21/59 (35%), Positives = 29/59 (49%)
Frame = +1
Query: 472 LLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVW 648
LLSCS D +A +W++ V KGHT V ++ G TAS D T ++W
Sbjct: 394 LLSCSEDASARLWSVDTKTALVA--YKGHTGPVWDVAFGPFGHYFA--TASHDQTAQLW 448
>SPAC890.04c |||ribosome biogenesis protein Ytm1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 440
Score = 31.1 bits (67), Expect = 0.22
Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
Frame = +1
Query: 439 WIHNHNGQTT-ELLSCSVDKTA----VIWTLQNGRWNVTSILKGHTEGVTNIYGNYHGDR 603
W + +TT E S S+ K +T Q G + + +GHT V +I + D
Sbjct: 224 WDFERSPETTLESFSSSISKKRRRKNAEFTPQAGARSPLILCEGHTGPVMDIV--FSDDP 281
Query: 604 LTVYTASTDSTIKVWERIEG 663
Y+ D TIK W+ I G
Sbjct: 282 SVAYSVGQDHTIKTWDLITG 301
>SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr
2|||Manual
Length = 404
Score = 30.7 bits (66), Expect = 0.29
Identities = 30/103 (29%), Positives = 44/103 (42%), Gaps = 10/103 (9%)
Frame = +1
Query: 403 LSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGRWNVTSI---LKGHTEGVT 573
LS HTG+V +V W + L S S D T +W ++ + + K T
Sbjct: 185 LSGHTGNVLAVDWCPKNE---FVLASGSADGTCRLWDIRKVSSSFACMDLHNKYLPSNQT 241
Query: 574 NI--YGNYHG-----DRLTVYTASTDSTIKVWERIEGTVTLKQ 681
NI YG +G D + + TD I+VW G TL++
Sbjct: 242 NISHYGTVNGLAWTSDARYLASCGTDDRIRVWNMESGRNTLRE 284
Score = 27.9 bits (59), Expect = 2.0
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = +1
Query: 373 NEKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGR 528
N+ T +SH+ G VN + W L SC D +W +++GR
Sbjct: 233 NKYLPSNQTNISHY-GTVNGLAW----TSDARYLASCGTDDRIRVWNMESGR 279
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 29.9 bits (64), Expect = 0.50
Identities = 30/88 (34%), Positives = 39/88 (44%), Gaps = 9/88 (10%)
Frame = +1
Query: 589 YHGDRLTVYTASTDSTIKVWERIEG---------TVTLKQSISLHSGLCLTLHAQILPCA 741
Y GD T+ T STD T++VW+ G T T++ I + G T +
Sbjct: 454 YVGD--TLVTGSTDRTVRVWDLRTGECKQVFYGHTSTIR-CIKIVQGNQSTTDTDDVEKE 510
Query: 742 NKPLLLCALDDPKYIYSSVRTITERILW 825
N+P A P YI SS R T R LW
Sbjct: 511 NRPASNDANSMPPYIISSSRDCTIR-LW 537
Score = 29.1 bits (62), Expect = 0.88
Identities = 32/133 (24%), Positives = 49/133 (36%)
Frame = +1
Query: 379 KTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGRWNVTSILKGH 558
KT + L H G V W + G T L++ S D+T +W L+ G + GH
Sbjct: 434 KTGVLIRSLEEHEGDV----WTFEYVGDT--LVTGSTDRTVRVWDLRTG--ECKQVFYGH 485
Query: 559 TEGVTNIYGNYHGDRLTVYTASTDSTIKVWERIEGTVTLKQSISLHSGLCLTLHAQILPC 738
T + I G++ T TD K + S T+ LPC
Sbjct: 486 TSTIRCI-KIVQGNQ---STTDTDDVEKENRPASNDANSMPPYIISSSRDCTIRLWSLPC 541
Query: 739 ANKPLLLCALDDP 777
+ P + ++P
Sbjct: 542 LDDPPFVNVNENP 554
>SPAC13G7.08c |crb3||WD repeat protein Crb3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 446
Score = 29.5 bits (63), Expect = 0.67
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Frame = +1
Query: 472 LLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNIY---GNYHGDRLTVYTASTDSTIK 642
L+S VD+ + T N S GH + ++ G RL YTAS D+TI+
Sbjct: 146 LISTLVDQNSTFET-SNSSVKAISHFSGHKRSIVSMEIGPGPIVSGRL--YTASEDNTIR 202
Query: 643 VWERIEGTVTLKQSISLHS-GLCLTL 717
+W+ T L +I+L S C+T+
Sbjct: 203 IWD--VSTGNLLTTIALPSTPSCMTV 226
>SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 855
Score = 29.1 bits (62), Expect = 0.88
Identities = 25/87 (28%), Positives = 42/87 (48%)
Frame = +1
Query: 412 HTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNIYGNY 591
HT + + W N+ LLS S+DKTA +W R + + H++ VT+I +
Sbjct: 308 HTADILDLSWSRNNF-----LLSSSMDKTARLW--HPVRKDCLCCFE-HSDFVTSIAFHP 359
Query: 592 HGDRLTVYTASTDSTIKVWERIEGTVT 672
DR + + S D +++W E V+
Sbjct: 360 KDDRFFL-SGSLDCKLRLWSIKEKAVS 385
>SPBC16D10.05 |mok13||alpha-1,3-glucan synthase
Mok13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2358
Score = 29.1 bits (62), Expect = 0.88
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -1
Query: 587 FPYILVTPSVCPLRILVTFQRPFCNVQMTAVLSTEQE 477
F LV+P +C L ++ FQ+ F V++ + +QE
Sbjct: 1062 FSLFLVSPLICALATMLAFQKFFYQVRLNKGIEKKQE 1098
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 28.7 bits (61), Expect = 1.2
Identities = 34/110 (30%), Positives = 50/110 (45%), Gaps = 11/110 (10%)
Frame = +1
Query: 373 NEKTKDRVTVLSH-HTGHVNSVKWIH----NHNGQTTELLSCSVDKTAVIWTL--QNGRW 531
N +D V H TGH SV + + NG T L S S D+T + L Q +
Sbjct: 392 NLNIEDNVYKCIHVFTGHTASVTAVALGPLDVNGYPTFLASSSQDRTLKRFNLGSQLNKS 451
Query: 532 NVTS----ILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWERIEGTV 669
+ ++ +K H V I + G R+ + +AS D TIK+W+ G V
Sbjct: 452 DFSNRAVWTIKAHDRDVNAIQVSKDG-RI-IASASQDKTIKLWDSSTGEV 499
>SPAC890.07c |rmt1|prmt1|type I protein arginine N-methyltransferase
Rmt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 339
Score = 28.3 bits (60), Expect = 1.5
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +1
Query: 571 TNIYGNYHGDRLTVYTASTDSTIKVWERIEGTVTLKQSISLHSGL 705
T + Y + TV+ D T+K E I GT+T K + H L
Sbjct: 269 TGPFSRYTHWKQTVFYTHKDLTVKAGEYIRGTITCKPAEGNHREL 313
>SPAC18G6.13 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 114
Score = 27.9 bits (59), Expect = 2.0
Identities = 12/54 (22%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Frame = +1
Query: 436 KWIHNHNGQTTELLSCSVDKTAVIWTLQNG--RWNVTSILKGHTEGVTNIYGNY 591
+W+ + + + ++C D IW G W + + +G T +T I Y
Sbjct: 14 QWVETSSLELVDSVNCVADLCHAIWMFNGGCADWRLQILKEGFTVPMTGIISQY 67
>SPBP19A11.07c ||SPBP4H10.02c|human down-regulated in multiple
cancers-1 homolog 2|Schizosaccharomyces pombe|chr
2|||Manual
Length = 676
Score = 27.5 bits (58), Expect = 2.7
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Frame = -1
Query: 317 FQSTTSGLRLQATDVYT---CS--TDTFIVPQNTFLNKFNFQKNHVPVYQN 180
F S + L A D+Y CS FI N FLN FN ++N + +Y +
Sbjct: 225 FSVLNSIVSLDAKDIYIRVICSFVNTGFIDSTNWFLNSFNQRRNSLQLYSS 275
>SPCC1235.09 |||histone deacetylase complex
subunit|Schizosaccharomyces pombe|chr 3|||Manual
Length = 564
Score = 27.5 bits (58), Expect = 2.7
Identities = 27/126 (21%), Positives = 57/126 (45%), Gaps = 4/126 (3%)
Frame = +1
Query: 289 NRKPEVVDWNYEGIICYGACNA----VVVCDPNEKTKDRVTVLSHHTGHVNSVKWIHNHN 456
N K V+ + G Y A + + + D ++T+ + L+ V ++WI
Sbjct: 303 NNKGPVLSLKWSGTDTYLAAGSADGTITLFDQLKQTQYSIDTLA---SSVLDIEWI---- 355
Query: 457 GQTTELLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDST 636
E ++ V+ + ++ + +G+ V+++ H + + N L TAS+D+T
Sbjct: 356 -SFDEFVTSDVEGSLRVYKV-DGKAPVSTVSHAHDNSIVALRYNLRISLLL--TASSDTT 411
Query: 637 IKVWER 654
+K+W R
Sbjct: 412 VKLWSR 417
>SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 494
Score = 27.1 bits (57), Expect = 3.6
Identities = 21/62 (33%), Positives = 26/62 (41%)
Frame = +1
Query: 466 TELLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKV 645
T LS S DKT +W L G V L GH E RL + D TI++
Sbjct: 137 TTFLSGSDDKTVKVWDLSTGA--VQYDLSGH-EDYVRTASWMSATRLV--SGGYDGTIRL 191
Query: 646 WE 651
W+
Sbjct: 192 WD 193
>SPAC17H9.19c |cdt2|sev1|WD repeat protein Cdt2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 490
Score = 27.1 bits (57), Expect = 3.6
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 421 HVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQ 519
H +SVK ++ N L+SCS D + + W ++
Sbjct: 227 HSHSVKQVNFCNDSPYNLVSCSRDGSIIFWDMR 259
>SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual
Length = 503
Score = 26.6 bits (56), Expect = 4.7
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = -3
Query: 564 FCMSLENTGDIPATVL*CPDDSSLIN*AREQLCCLAIVIVYPFYRVYVSCMVTQY 400
F ++ E+TG + C + S N E L L ++ +PFYR + +V QY
Sbjct: 252 FLIANESTGHLMKNH--CRNSSPHDNPILEYLFALVSLLAWPFYRRKLDSLVYQY 304
>SPBC2A9.03 |||conserved protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 426
Score = 26.6 bits (56), Expect = 4.7
Identities = 17/64 (26%), Positives = 33/64 (51%)
Frame = +1
Query: 460 QTTELLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTI 639
+T L C+ K A++ +++ N S H++ V + G++H + + T D+T
Sbjct: 270 ETPLALVCTDSKDAMLIDIRS---NSVSAKLPHSDSV--LTGSWHPNGNILATGGQDTTA 324
Query: 640 KVWE 651
KVW+
Sbjct: 325 KVWD 328
>SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 984
Score = 26.6 bits (56), Expect = 4.7
Identities = 33/157 (21%), Positives = 70/157 (44%)
Frame = +1
Query: 232 VFCGTMKVSVEQVYTSVACNRKPEVVDWNYEGIICYGACNAVVVCDPNEKTKDRVTVLSH 411
+FC T+++S ++Y + A + ++ W + Y + V D T L
Sbjct: 147 LFCATVQISGNEIYIASA-SAFQQIYVWKFN----YNNPPSCVSID---------TYLVG 192
Query: 412 HTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNIYGNY 591
H G +K+ + +G+ L S S D+T +W++++ + + + GH+ ++
Sbjct: 193 HEGACFDLKF--SSDGRY--LCSVSEDRTLRLWSIESSPFLIATGF-GHS---ARVWRCV 244
Query: 592 HGDRLTVYTASTDSTIKVWERIEGTVTLKQSISLHSG 702
+ T S D T+++W + T+T + + H G
Sbjct: 245 FLPNKEIATVSEDLTLRLWTWNDKTLTNTYTYTGHRG 281
>SPBC16C6.09 |ogm4|oma4|protein O-mannosyltransferase
Ogm4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 778
Score = 26.2 bits (55), Expect = 6.2
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = -3
Query: 666 RTFYSFPNFNGRISGCSVNSKSVSMVISIYIGNSFCMSLENTGDI 532
R ++++ F G C++++K V + IG S C+ L DI
Sbjct: 226 RPWWAWLFFTGFFLSCTISTKYVGFFTFLSIGLSVCLELWYLWDI 270
>SPAC24B11.13 |hem3|SPAC806.01|hydroxymethylbilane
synthase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 336
Score = 26.2 bits (55), Expect = 6.2
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 437 NGYTITMAKQQSCSLAQLIRLLSSGHYKTVAGMSP 541
+G I ++SC L ++ + HYKTVA + P
Sbjct: 95 DGMVIACIPKRSCPLDAIV-FKAGSHYKTVADLPP 128
>SPAC9G1.05 |||actin cortical patch component Aip1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 595
Score = 26.2 bits (55), Expect = 6.2
Identities = 19/70 (27%), Positives = 30/70 (42%)
Frame = +1
Query: 316 NYEGIICYGACNAVVVCDPNEKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDK 495
N E GA V V D KT D+V + H G + S+ W + +++ ++ S
Sbjct: 200 NDERFASAGADGKVYVFDG--KTGDQVYEIDAHKGSIFSISW----SPDSSQFVTSSAGY 253
Query: 496 TAVIWTLQNG 525
+ IW G
Sbjct: 254 SCKIWDANTG 263
>SPAC343.17c |||WD repeat protein, human WDR70
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 576
Score = 26.2 bits (55), Expect = 6.2
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 553 GHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWE 651
GH++ VT + +G R YT S D+TI W+
Sbjct: 87 GHSKIVTTTTFDKNGSRF--YTGSLDNTIHCWD 117
>SPBC1271.10c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 581
Score = 25.8 bits (54), Expect = 8.2
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +1
Query: 532 NVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIK 642
NV I+ G T G IYG Y GD T++ A ++ IK
Sbjct: 387 NVPCII-GATIGC--IYGGYFGDYFTLWAAKRNNGIK 420
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,445,809
Number of Sequences: 5004
Number of extensions: 72107
Number of successful extensions: 309
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 233
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 301
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 444486180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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