Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_N01
(884 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical ... 57 1e-08
AF047651-2|AAL13318.1| 486|Caenorhabditis elegans Hypothetical ... 44 1e-04
AF047651-1|AAK67207.1| 484|Caenorhabditis elegans Hypothetical ... 44 1e-04
Z74030-18|CAA98448.1| 494|Caenorhabditis elegans Hypothetical p... 43 3e-04
Z73970-6|CAA98247.1| 494|Caenorhabditis elegans Hypothetical pr... 43 3e-04
Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical pr... 43 3e-04
Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical pr... 43 3e-04
Z73978-3|CAA98293.1| 501|Caenorhabditis elegans Hypothetical pr... 43 3e-04
AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein. 43 3e-04
AC024214-18|AAF36083.1| 211|Caenorhabditis elegans Nuclear pore... 42 4e-04
AC024214-17|AAF36082.1| 313|Caenorhabditis elegans Nuclear pore... 42 4e-04
Z81113-5|CAB03282.3| 404|Caenorhabditis elegans Hypothetical pr... 42 6e-04
AF164430-1|AAF82632.1| 404|Caenorhabditis elegans LIS-1 protein. 42 6e-04
U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical pr... 41 0.001
AF000265-5|AAK68197.1| 331|Caenorhabditis elegans Hypothetical ... 41 0.001
Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical pr... 39 0.005
AC006708-11|AAF60426.2| 1019|Caenorhabditis elegans Hypothetical... 38 0.007
Z71181-10|CAA94901.2| 678|Caenorhabditis elegans Hypothetical p... 37 0.022
Z71177-11|CAA94873.2| 678|Caenorhabditis elegans Hypothetical p... 37 0.022
Z99278-1|CAB16490.1| 793|Caenorhabditis elegans Hypothetical pr... 36 0.029
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 36 0.029
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 36 0.029
Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical pr... 36 0.029
Z48809-2|CAA88747.1| 406|Caenorhabditis elegans Hypothetical pr... 36 0.029
AC024867-3|AAK68601.2| 327|Caenorhabditis elegans Eukaryotic in... 36 0.039
AF039711-10|AAB96707.2| 567|Caenorhabditis elegans Yeast prp (s... 36 0.051
Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical pr... 35 0.089
AC024818-3|AAF60780.2| 453|Caenorhabditis elegans Hypothetical ... 34 0.12
AC024770-5|AAK84605.2| 684|Caenorhabditis elegans Hypothetical ... 34 0.12
U28730-7|AAA68258.2| 665|Caenorhabditis elegans Abnormal cell l... 34 0.16
AL110501-4|CAB54510.1| 368|Caenorhabditis elegans Hypothetical ... 34 0.16
AF275253-1|AAG28037.1| 665|Caenorhabditis elegans LIN-23 protein. 34 0.16
Z81097-15|CAB03172.1| 412|Caenorhabditis elegans Hypothetical p... 33 0.21
AL132904-13|CAC35846.4| 778|Caenorhabditis elegans Hypothetical... 33 0.21
Z81097-20|CAB03178.1| 417|Caenorhabditis elegans Hypothetical p... 33 0.27
Z80216-3|CAB02280.1| 373|Caenorhabditis elegans Hypothetical pr... 33 0.27
AL023833-1|CAA19477.1| 417|Caenorhabditis elegans Hypothetical ... 33 0.27
AF116530-1|AAD05571.1| 417|Caenorhabditis elegans synthetic mul... 33 0.27
AL021481-1|CAA16333.1| 363|Caenorhabditis elegans Hypothetical ... 32 0.47
U42833-5|AAA83580.1| 444|Caenorhabditis elegans Hypothetical pr... 31 0.83
AC024857-1|AAK31566.2| 869|Caenorhabditis elegans Temporarily a... 30 1.9
U80447-5|AAB37809.1| 439|Caenorhabditis elegans Temporarily ass... 30 2.5
Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical pr... 29 4.4
AY733040-1|AAW57534.1| 1425|Caenorhabditis elegans death-associa... 29 4.4
AF043701-1|AAK18971.2| 1425|Caenorhabditis elegans Dap (death-as... 29 4.4
Z81099-1|CAB03187.1| 600|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z68315-3|CAA92670.1| 430|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z68222-10|CAA92505.3| 1701|Caenorhabditis elegans Hypothetical p... 28 7.7
Z68218-5|CAA92475.3| 1701|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z49912-7|CAI70412.1| 554|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z49912-6|CAA90137.1| 615|Caenorhabditis elegans Hypothetical pr... 28 7.7
U53340-3|AAA96208.1| 578|Caenorhabditis elegans Hypothetical pr... 28 7.7
AF101313-1|AAC69223.1| 1802|Caenorhabditis elegans Abc transport... 28 7.7
AF101309-3|AAN60514.1| 760|Caenorhabditis elegans Hypothetical ... 28 7.7
AF101309-2|AAL32230.1| 1601|Caenorhabditis elegans Hypothetical ... 28 7.7
AF101309-1|AAL32229.1| 1680|Caenorhabditis elegans Hypothetical ... 28 7.7
>AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical
protein W07E6.2 protein.
Length = 473
Score = 57.2 bits (132), Expect = 1e-08
Identities = 37/123 (30%), Positives = 55/123 (44%), Gaps = 2/123 (1%)
Frame = +1
Query: 307 VDWNYEGIICYGACNAVVVCDPNEKTKDRV-TVLSHHTGHVNSVKWIHNHNGQTTELL-S 480
+ W+ + AC +C N KT +++ L H + S+ W H T LL S
Sbjct: 153 IAWSPDATKIASACKNGEICIWNAKTGEQIGKTLKRHKQWITSLAWQPMHKDPTCRLLAS 212
Query: 481 CSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWERIE 660
C D IW G V L GHT VT + + G+ L +Y+ S D T+K+W +
Sbjct: 213 CGKDGNIFIWDTVQG--TVVRCLSGHTASVTCL--RWGGEGL-IYSGSQDRTVKMWRADD 267
Query: 661 GTV 669
G +
Sbjct: 268 GVM 270
Score = 30.7 bits (66), Expect = 1.4
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Frame = +1
Query: 466 TELLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNI-YGNYHGDRLTVYTAST--DST 636
T++ S + IW + G + LK H + +T++ + H D AS D
Sbjct: 160 TKIASACKNGEICIWNAKTGE-QIGKTLKRHKQWITSLAWQPMHKDPTCRLLASCGKDGN 218
Query: 637 IKVWERIEGTVTLKQSISLHSGLCL 711
I +W+ ++GTV S S CL
Sbjct: 219 IFIWDTVQGTVVRCLSGHTASVTCL 243
>AF047651-2|AAL13318.1| 486|Caenorhabditis elegans Hypothetical
protein C05D2.10b protein.
Length = 486
Score = 44.0 bits (99), Expect = 1e-04
Identities = 25/83 (30%), Positives = 47/83 (56%)
Frame = +1
Query: 403 LSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNIY 582
L+ H V+ +W+ GQ ++++ S D+TA +W ++ G V +IL GH + +
Sbjct: 276 LTGHRAPVSCCEWLAG--GQ--QMVTASWDRTANVWDVEKGE--VVNILSGHESELNHC- 328
Query: 583 GNYHGDRLTVYTASTDSTIKVWE 651
+ H ++ V T+S DST ++W+
Sbjct: 329 -STHSNQKLVLTSSKDSTFRLWD 350
Score = 38.7 bits (86), Expect = 0.005
Identities = 21/79 (26%), Positives = 44/79 (55%)
Frame = +1
Query: 415 TGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNIYGNYH 594
+GH + + H+ Q L S S D T +W + +V ++ +GH + VT++ +++
Sbjct: 319 SGHESELNHCSTHSNQKLVLTS-SKDSTFRLWDFREAIQSV-AVFQGHQDSVTSV--SFN 374
Query: 595 GDRLTVYTASTDSTIKVWE 651
D + ++S D+T+K+W+
Sbjct: 375 TD-YRIVSSSDDATVKIWD 392
>AF047651-1|AAK67207.1| 484|Caenorhabditis elegans Hypothetical
protein C05D2.10a protein.
Length = 484
Score = 44.0 bits (99), Expect = 1e-04
Identities = 25/83 (30%), Positives = 47/83 (56%)
Frame = +1
Query: 403 LSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNIY 582
L+ H V+ +W+ GQ ++++ S D+TA +W ++ G V +IL GH + +
Sbjct: 274 LTGHRAPVSCCEWLAG--GQ--QMVTASWDRTANVWDVEKGE--VVNILSGHESELNHC- 326
Query: 583 GNYHGDRLTVYTASTDSTIKVWE 651
+ H ++ V T+S DST ++W+
Sbjct: 327 -STHSNQKLVLTSSKDSTFRLWD 348
Score = 38.7 bits (86), Expect = 0.005
Identities = 21/79 (26%), Positives = 44/79 (55%)
Frame = +1
Query: 415 TGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNIYGNYH 594
+GH + + H+ Q L S S D T +W + +V ++ +GH + VT++ +++
Sbjct: 317 SGHESELNHCSTHSNQKLVLTS-SKDSTFRLWDFREAIQSV-AVFQGHQDSVTSV--SFN 372
Query: 595 GDRLTVYTASTDSTIKVWE 651
D + ++S D+T+K+W+
Sbjct: 373 TD-YRIVSSSDDATVKIWD 390
>Z74030-18|CAA98448.1| 494|Caenorhabditis elegans Hypothetical
protein D1054.15 protein.
Length = 494
Score = 43.2 bits (97), Expect = 3e-04
Identities = 28/110 (25%), Positives = 53/110 (48%)
Frame = +1
Query: 400 VLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNI 579
V+ H+ GH+++V+ + H L++C+ D TA +W ++ GHT V ++
Sbjct: 260 VIRHYHGHLSAVQALSVHPSLDV-LVTCARDSTARVWDMRTKAQ--VHCFAGHTNTVADV 316
Query: 580 YGNYHGDRLTVYTASTDSTIKVWERIEGTVTLKQSISLHSGLCLTLHAQI 729
+ V TAS D+T+++W+ G + S LT+H ++
Sbjct: 317 VCQSVDPQ--VITASHDATVRLWDLAAGRSMCTLTHHKKSVRALTIHPRL 364
>Z73970-6|CAA98247.1| 494|Caenorhabditis elegans Hypothetical
protein D1054.15 protein.
Length = 494
Score = 43.2 bits (97), Expect = 3e-04
Identities = 28/110 (25%), Positives = 53/110 (48%)
Frame = +1
Query: 400 VLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNI 579
V+ H+ GH+++V+ + H L++C+ D TA +W ++ GHT V ++
Sbjct: 260 VIRHYHGHLSAVQALSVHPSLDV-LVTCARDSTARVWDMRTKAQ--VHCFAGHTNTVADV 316
Query: 580 YGNYHGDRLTVYTASTDSTIKVWERIEGTVTLKQSISLHSGLCLTLHAQI 729
+ V TAS D+T+++W+ G + S LT+H ++
Sbjct: 317 VCQSVDPQ--VITASHDATVRLWDLAAGRSMCTLTHHKKSVRALTIHPRL 364
>Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical
protein F55B12.3b protein.
Length = 585
Score = 42.7 bits (96), Expect = 3e-04
Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 2/140 (1%)
Frame = +1
Query: 289 NRKPEVVDWNYEGIICYGACNAVV-VCD-PNEKTKDRVTVLSHHTGHVNSVKWIHNHNGQ 462
NR ++ + I+C G+ + + V D + ++ V +L HT + ++ N
Sbjct: 417 NRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLRGNI--- 473
Query: 463 TTELLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIK 642
L+SC+ D +W + G +L GH +T++ + G R V T+S D T+K
Sbjct: 474 ---LVSCNADSHVRVWDIHEG--TCVHMLSGHRSAITSL--QWFG-RNMVATSSDDGTVK 525
Query: 643 VWERIEGTVTLKQSISLHSG 702
+W+ IE ++ ++L SG
Sbjct: 526 LWD-IERGALIRDLVTLDSG 544
Score = 41.9 bits (94), Expect = 6e-04
Identities = 34/124 (27%), Positives = 53/124 (42%)
Frame = +1
Query: 400 VLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNI 579
VL H HV + IH+ L++ S D T +W + G V L GHT GV
Sbjct: 248 VLRGHEDHVITCMQIHDD-----VLVTGSDDNTLKVWCIDKGE--VMYTLVGHTGGVWTS 300
Query: 580 YGNYHGDRLTVYTASTDSTIKVWERIEGTVTLKQSISLHSGLCLTLHAQILPCANKPLLL 759
+ G + + STD T+KVW ++G++ + C+ + IL ++ L
Sbjct: 301 QISQCGRYIV--SGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGSILVTGSRDTTL 358
Query: 760 CALD 771
D
Sbjct: 359 RVWD 362
Score = 29.9 bits (64), Expect = 2.5
Identities = 20/64 (31%), Positives = 30/64 (46%)
Frame = +1
Query: 472 LLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWE 651
L++ S D T +W +++GR T L GH V + D TV + D T+K+W
Sbjct: 349 LVTGSRDTTLRVWDVESGRHLAT--LHGHHAAVRCV----QFDGTTVVSGGYDFTVKIWN 402
Query: 652 RIEG 663
G
Sbjct: 403 AHTG 406
>Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical
protein F55B12.3a protein.
Length = 587
Score = 42.7 bits (96), Expect = 3e-04
Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 2/140 (1%)
Frame = +1
Query: 289 NRKPEVVDWNYEGIICYGACNAVV-VCD-PNEKTKDRVTVLSHHTGHVNSVKWIHNHNGQ 462
NR ++ + I+C G+ + + V D + ++ V +L HT + ++ N
Sbjct: 419 NRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLRGNI--- 475
Query: 463 TTELLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIK 642
L+SC+ D +W + G +L GH +T++ + G R V T+S D T+K
Sbjct: 476 ---LVSCNADSHVRVWDIHEG--TCVHMLSGHRSAITSL--QWFG-RNMVATSSDDGTVK 527
Query: 643 VWERIEGTVTLKQSISLHSG 702
+W+ IE ++ ++L SG
Sbjct: 528 LWD-IERGALIRDLVTLDSG 546
Score = 41.9 bits (94), Expect = 6e-04
Identities = 34/124 (27%), Positives = 53/124 (42%)
Frame = +1
Query: 400 VLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNI 579
VL H HV + IH+ L++ S D T +W + G V L GHT GV
Sbjct: 250 VLRGHEDHVITCMQIHDD-----VLVTGSDDNTLKVWCIDKGE--VMYTLVGHTGGVWTS 302
Query: 580 YGNYHGDRLTVYTASTDSTIKVWERIEGTVTLKQSISLHSGLCLTLHAQILPCANKPLLL 759
+ G + + STD T+KVW ++G++ + C+ + IL ++ L
Sbjct: 303 QISQCGRYIV--SGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGSILVTGSRDTTL 360
Query: 760 CALD 771
D
Sbjct: 361 RVWD 364
Score = 29.9 bits (64), Expect = 2.5
Identities = 20/64 (31%), Positives = 30/64 (46%)
Frame = +1
Query: 472 LLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWE 651
L++ S D T +W +++GR T L GH V + D TV + D T+K+W
Sbjct: 351 LVTGSRDTTLRVWDVESGRHLAT--LHGHHAAVRCV----QFDGTTVVSGGYDFTVKIWN 404
Query: 652 RIEG 663
G
Sbjct: 405 AHTG 408
>Z73978-3|CAA98293.1| 501|Caenorhabditis elegans Hypothetical
protein ZC302.2a protein.
Length = 501
Score = 42.7 bits (96), Expect = 3e-04
Identities = 24/83 (28%), Positives = 44/83 (53%)
Frame = +1
Query: 418 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNIYGNYHG 597
GH N V + + N Q++ + S D+T +W + G + H++ +T+I N+ G
Sbjct: 295 GHTNYV-FCCSFNPQSSLIASAGFDETVRVWDFKTGL--CVKCIPAHSDPITSISYNHDG 351
Query: 598 DRLTVYTASTDSTIKVWERIEGT 666
+ T+ T+S D I+VW+ G+
Sbjct: 352 N--TMATSSYDGCIRVWDAASGS 372
Score = 37.5 bits (83), Expect = 0.013
Identities = 20/60 (33%), Positives = 34/60 (56%)
Frame = +1
Query: 517 QNGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWERIEGTVTLKQSISLH 696
+NG +++ + GHT+ V+ I +Y G L T S D IKVW ++ +T Q+++ H
Sbjct: 199 ENGEFSLVKTISGHTKSVSVIKFSYCGKYLG--TGSADKQIKVWNTVD--MTYLQTLASH 254
>AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein.
Length = 587
Score = 42.7 bits (96), Expect = 3e-04
Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 2/140 (1%)
Frame = +1
Query: 289 NRKPEVVDWNYEGIICYGACNAVV-VCD-PNEKTKDRVTVLSHHTGHVNSVKWIHNHNGQ 462
NR ++ + I+C G+ + + V D + ++ V +L HT + ++ N
Sbjct: 419 NRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLRGNI--- 475
Query: 463 TTELLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIK 642
L+SC+ D +W + G +L GH +T++ + G R V T+S D T+K
Sbjct: 476 ---LVSCNADSHVRVWDIHEG--TCVHMLSGHRSAITSL--QWFG-RNMVATSSDDGTVK 527
Query: 643 VWERIEGTVTLKQSISLHSG 702
+W+ IE ++ ++L SG
Sbjct: 528 LWD-IERGALIRDLVTLDSG 546
Score = 41.9 bits (94), Expect = 6e-04
Identities = 34/124 (27%), Positives = 53/124 (42%)
Frame = +1
Query: 400 VLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNI 579
VL H HV + IH+ L++ S D T +W + G V L GHT GV
Sbjct: 250 VLRGHEDHVITCMQIHDD-----VLVTGSDDNTLKVWCIDKGE--VMYTLVGHTGGVWTS 302
Query: 580 YGNYHGDRLTVYTASTDSTIKVWERIEGTVTLKQSISLHSGLCLTLHAQILPCANKPLLL 759
+ G + + STD T+KVW ++G++ + C+ + IL ++ L
Sbjct: 303 QISQCGRYIV--SGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGSILVTGSRDTTL 360
Query: 760 CALD 771
D
Sbjct: 361 RVWD 364
Score = 29.9 bits (64), Expect = 2.5
Identities = 20/64 (31%), Positives = 30/64 (46%)
Frame = +1
Query: 472 LLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWE 651
L++ S D T +W +++GR T L GH V + D TV + D T+K+W
Sbjct: 351 LVTGSRDTTLRVWDVESGRHLAT--LHGHHAAVRCV----QFDGTTVVSGGYDFTVKIWN 404
Query: 652 RIEG 663
G
Sbjct: 405 AHTG 408
>AC024214-18|AAF36083.1| 211|Caenorhabditis elegans Nuclear pore
complex protein protein20, isoform b protein.
Length = 211
Score = 42.3 bits (95), Expect = 4e-04
Identities = 26/78 (33%), Positives = 32/78 (41%)
Frame = +1
Query: 412 HTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNIYGNY 591
H+G V V W H G L S S DK +IW Q GRW H T +
Sbjct: 57 HSGPVWKVSWAHPKYGGL--LASASYDKKVIIWNEQQGRWQKAYEWAAHEASTTCVAFAP 114
Query: 592 HGDRLTVYTASTDSTIKV 645
H L + +AS D I +
Sbjct: 115 HQYGLMLASASADGDIGI 132
>AC024214-17|AAF36082.1| 313|Caenorhabditis elegans Nuclear pore
complex protein protein20, isoform a protein.
Length = 313
Score = 42.3 bits (95), Expect = 4e-04
Identities = 26/78 (33%), Positives = 32/78 (41%)
Frame = +1
Query: 412 HTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNIYGNY 591
H+G V V W H G L S S DK +IW Q GRW H T +
Sbjct: 57 HSGPVWKVSWAHPKYGGL--LASASYDKKVIIWNEQQGRWQKAYEWAAHEASTTCVAFAP 114
Query: 592 HGDRLTVYTASTDSTIKV 645
H L + +AS D I +
Sbjct: 115 HQYGLMLASASADGDIGI 132
>Z81113-5|CAB03282.3| 404|Caenorhabditis elegans Hypothetical
protein T03F6.5 protein.
Length = 404
Score = 41.9 bits (94), Expect = 6e-04
Identities = 23/62 (37%), Positives = 36/62 (58%)
Frame = +1
Query: 466 TELLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKV 645
T + SCS D T +W + G+ T LKGHT+ V +I + G +L + S+D +IK+
Sbjct: 119 TIMASCSEDATIKVWDYETGQLERT--LKGHTDAVNDIAIDAAGKQLV--SCSSDLSIKL 174
Query: 646 WE 651
W+
Sbjct: 175 WD 176
>AF164430-1|AAF82632.1| 404|Caenorhabditis elegans LIS-1 protein.
Length = 404
Score = 41.9 bits (94), Expect = 6e-04
Identities = 23/62 (37%), Positives = 36/62 (58%)
Frame = +1
Query: 466 TELLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKV 645
T + SCS D T +W + G+ T LKGHT+ V +I + G +L + S+D +IK+
Sbjct: 119 TIMASCSEDATIKVWDYETGQLERT--LKGHTDAVNDIAIDAAGKQLV--SCSSDLSIKL 174
Query: 646 WE 651
W+
Sbjct: 175 WD 176
>U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical
protein T10F2.4 protein.
Length = 492
Score = 41.1 bits (92), Expect = 0.001
Identities = 29/110 (26%), Positives = 51/110 (46%)
Frame = +1
Query: 475 LSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWER 654
L+ +DKT V++ + + V KGH + + + H D +T +AS DS I+VW
Sbjct: 225 LTGGIDKTVVLYDYEKEQ--VMQTFKGHNKKINAVV--LHPDNITAISASADSHIRVWSA 280
Query: 655 IEGTVTLKQSISLHSGLCLTLHAQILPCANKPLLLCALDDPKYIYSSVRT 804
+ + K I +H + A+ +L A DD + +S +R+
Sbjct: 281 TDS--SSKAIIDVHQAPVTDISLN----ASGDYILSASDDSYWAFSDIRS 324
>AF000265-5|AAK68197.1| 331|Caenorhabditis elegans Hypothetical
protein C18E3.5 protein.
Length = 331
Score = 41.1 bits (92), Expect = 0.001
Identities = 25/86 (29%), Positives = 43/86 (50%)
Frame = +1
Query: 388 DRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGRWNVTSILKGHTEG 567
+ VL H G + VK+ N ++ L+S DKT +W ++ G + K HT+
Sbjct: 70 ENFAVLKGHKGAIMEVKF----NADSSHLVSAGTDKTVRVWDMETG--SCIRNFKSHTDI 123
Query: 568 VTNIYGNYHGDRLTVYTASTDSTIKV 645
V ++ N G ++ + +AS D T+ V
Sbjct: 124 VNSVDVNRRGPQM-ICSASDDGTVMV 148
>Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical
protein F38E11.5 protein.
Length = 1000
Score = 40.3 bits (90), Expect = 0.002
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +1
Query: 418 GHVNSVKWI-HNHNGQTTELLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNIYGNYH 594
GH V + + H G+ ++S + D IW QN L GH + V+++ +H
Sbjct: 183 GHEKGVNCVDYYHGGEKPYIISGADDHLVKIWDYQNK--TCVQTLDGHAQNVSSVC--FH 238
Query: 595 GDRLTVYTASTDSTIKVW 648
+ + T S DST+++W
Sbjct: 239 PELPLIITGSEDSTVRLW 256
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +1
Query: 418 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNIYGNYH- 594
GH + V I + + S+DKT +W + N T L+GH +GV N YH
Sbjct: 140 GHTHYVMQIAINPKDNNTFATASLDKTVKVWQFGSNVPNFT--LEGHEKGV-NCVDYYHG 196
Query: 595 GDRLTVYTASTDSTIKVWE 651
G++ + + + D +K+W+
Sbjct: 197 GEKPYIISGADDHLVKIWD 215
>Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical
protein K04G11.4 protein.
Length = 395
Score = 38.7 bits (86), Expect = 0.005
Identities = 26/83 (31%), Positives = 40/83 (48%)
Frame = +1
Query: 418 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNIYGNYHG 597
GH N V + N T + S S D+T IW +NG N + GH + V+++ N G
Sbjct: 188 GHTNYV-FCCCFNPSGTLIASGSFDETIRIWCARNG--NTIFSIPGHEDPVSSVCFNRDG 244
Query: 598 DRLTVYTASTDSTIKVWERIEGT 666
L + S D +++W+ GT
Sbjct: 245 AYLA--SGSYDGIVRIWDSTTGT 265
Score = 37.1 bits (82), Expect = 0.017
Identities = 25/84 (29%), Positives = 40/84 (47%)
Frame = +1
Query: 397 TVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTN 576
T++ H G +N W + + ++SCS DK ++ + +GR LKGHT V
Sbjct: 143 TLMGHRLG-INEFSW----SSDSKLIVSCSDDKLVKVFDVSSGR--CVKTLKGHTNYVFC 195
Query: 577 IYGNYHGDRLTVYTASTDSTIKVW 648
N G + + S D TI++W
Sbjct: 196 CCFNPSG--TLIASGSFDETIRIW 217
>AC006708-11|AAF60426.2| 1019|Caenorhabditis elegans Hypothetical
protein Y110A7A.9a protein.
Length = 1019
Score = 38.3 bits (85), Expect = 0.007
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +1
Query: 307 VDWNYEGIICYGACNAVVVCDPNEKTKDRVTVLSHHTGHVNSVKW 441
+DWN G+I YG+ N + V D + R+ + HH +N ++W
Sbjct: 18 IDWNDGGLIAYGSHNLIFVVDVMQ--YKRIQSIEHHQSAINIIRW 60
>Z71181-10|CAA94901.2| 678|Caenorhabditis elegans Hypothetical
protein K07C5.8 protein.
Length = 678
Score = 36.7 bits (81), Expect = 0.022
Identities = 18/60 (30%), Positives = 33/60 (55%)
Frame = +1
Query: 535 VTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWERIEGTVTLKQSISLHSGLCLT 714
+T L GHT+ + ++ YH + +AS+DST+++WE G ++ + SG+ T
Sbjct: 458 LTETLTGHTDAIWSVA--YHSSNSRLVSASSDSTVRLWEPGNGEPLIRTIGAPKSGILPT 515
Score = 31.5 bits (68), Expect = 0.83
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 517 QNGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVW 648
Q +WN+ L+ H + + + +H ++TAS D IK+W
Sbjct: 345 QQVKWNIKVTLRSHLDSIRAM--QFHPVEPVLFTASEDGLIKLW 386
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +1
Query: 367 DPNEKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNG 525
DP + RV + TGH +++ W ++ + L+S S D T +W NG
Sbjct: 448 DPFDSYDPRV-LTETLTGHTDAI-WSVAYHSSNSRLVSASSDSTVRLWEPGNG 498
>Z71177-11|CAA94873.2| 678|Caenorhabditis elegans Hypothetical
protein K07C5.8 protein.
Length = 678
Score = 36.7 bits (81), Expect = 0.022
Identities = 18/60 (30%), Positives = 33/60 (55%)
Frame = +1
Query: 535 VTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWERIEGTVTLKQSISLHSGLCLT 714
+T L GHT+ + ++ YH + +AS+DST+++WE G ++ + SG+ T
Sbjct: 458 LTETLTGHTDAIWSVA--YHSSNSRLVSASSDSTVRLWEPGNGEPLIRTIGAPKSGILPT 515
Score = 31.5 bits (68), Expect = 0.83
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 517 QNGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVW 648
Q +WN+ L+ H + + + +H ++TAS D IK+W
Sbjct: 345 QQVKWNIKVTLRSHLDSIRAM--QFHPVEPVLFTASEDGLIKLW 386
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +1
Query: 367 DPNEKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNG 525
DP + RV + TGH +++ W ++ + L+S S D T +W NG
Sbjct: 448 DPFDSYDPRV-LTETLTGHTDAI-WSVAYHSSNSRLVSASSDSTVRLWEPGNG 498
>Z99278-1|CAB16490.1| 793|Caenorhabditis elegans Hypothetical
protein Y53C12B.1 protein.
Length = 793
Score = 36.3 bits (80), Expect = 0.029
Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 7/84 (8%)
Frame = +1
Query: 418 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGRWN-------VTSILKGHTEGVTN 576
GH SV + + T+ L SCS D + + W L N + GH VT
Sbjct: 358 GHTESVLSVVSPTWDTSLLASCSKDNSIIFWRLVTSPENDSCSTLVPVAAATGHANTVTA 417
Query: 577 IYGNYHGDRLTVYTASTDSTIKVW 648
+ + G + + STD TIK+W
Sbjct: 418 LAISNTGRAPFLASVSTDCTIKLW 441
Score = 29.1 bits (62), Expect = 4.4
Identities = 23/82 (28%), Positives = 36/82 (43%)
Frame = +1
Query: 403 LSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNIY 582
LS H V VK+ N + +L SCS D T IW + + + GH+ V +
Sbjct: 519 LSGHRRGVGDVKFAKNSH----KLASCSGDMTIKIWNISEK--SCLQTISGHSCAVFRVI 572
Query: 583 GNYHGDRLTVYTASTDSTIKVW 648
+ +L +A + IK+W
Sbjct: 573 FARNDSQL--ISADSAGIIKIW 592
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 36.3 bits (80), Expect = 0.029
Identities = 29/113 (25%), Positives = 53/113 (46%), Gaps = 3/113 (2%)
Frame = +1
Query: 322 EGIICYGACNAVVVCDPNEKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTA 501
E I+C + ++ V D ++ + R T+++ H VNSV + + + S D
Sbjct: 240 EQIVCGTSQYSIHVFDVEQRRRIR-TIVNAHEDDVNSVCFADLGSNL---IYSAGDDGLV 295
Query: 502 VIWTLQ---NGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWE 651
+W + +G + GH +GVT++ + D + + S D TIKVW+
Sbjct: 296 KVWDKRAWSDGDVEPVGVFAGHRDGVTHV--DSRQDERYLLSNSKDQTIKVWD 346
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/65 (21%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +1
Query: 463 TTELLSCSVDKTAV-IWTLQNGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTI 639
++E + C + ++ ++ ++ R + +I+ H + V ++ G L +Y+A D +
Sbjct: 238 SSEQIVCGTSQYSIHVFDVEQRR-RIRTIVNAHEDDVNSVCFADLGSNL-IYSAGDDGLV 295
Query: 640 KVWER 654
KVW++
Sbjct: 296 KVWDK 300
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 36.3 bits (80), Expect = 0.029
Identities = 29/113 (25%), Positives = 53/113 (46%), Gaps = 3/113 (2%)
Frame = +1
Query: 322 EGIICYGACNAVVVCDPNEKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTA 501
E I+C + ++ V D ++ + R T+++ H VNSV + + + S D
Sbjct: 281 EQIVCGTSQYSIHVFDVEQRRRIR-TIVNAHEDDVNSVCFADLGSNL---IYSAGDDGLV 336
Query: 502 VIWTLQ---NGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWE 651
+W + +G + GH +GVT++ + D + + S D TIKVW+
Sbjct: 337 KVWDKRAWSDGDVEPVGVFAGHRDGVTHV--DSRQDERYLLSNSKDQTIKVWD 387
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/65 (21%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +1
Query: 463 TTELLSCSVDKTAV-IWTLQNGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTI 639
++E + C + ++ ++ ++ R + +I+ H + V ++ G L +Y+A D +
Sbjct: 279 SSEQIVCGTSQYSIHVFDVEQRR-RIRTIVNAHEDDVNSVCFADLGSNL-IYSAGDDGLV 336
Query: 640 KVWER 654
KVW++
Sbjct: 337 KVWDK 341
>Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical
protein K04D7.1 protein.
Length = 325
Score = 36.3 bits (80), Expect = 0.029
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +1
Query: 535 VTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWE 651
+T L+GHT VT I D+ TV ++S D TI VW+
Sbjct: 8 LTGTLEGHTGWVTQIATYTRNDKTTVLSSSRDKTILVWD 46
Score = 33.9 bits (74), Expect = 0.16
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 9/105 (8%)
Frame = +1
Query: 403 LSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQN---------GRWNVTSILKG 555
L HTG V + + N +TT +LS S DKT ++W + + GR V S L G
Sbjct: 12 LEGHTGWVTQIA-TYTRNDKTT-VLSSSRDKTILVWDVDSVAPVDEGPIGR-PVRS-LTG 67
Query: 556 HTEGVTNIYGNYHGDRLTVYTASTDSTIKVWERIEGTVTLKQSIS 690
H V+++ D + S D T+++W+ +G V+ +Q IS
Sbjct: 68 HNHFVSDVV--ISSDGQFALSGSWDKTLRLWDLNQG-VSTRQFIS 109
>Z48809-2|CAA88747.1| 406|Caenorhabditis elegans Hypothetical
protein T01E8.4 protein.
Length = 406
Score = 36.3 bits (80), Expect = 0.029
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 9/88 (10%)
Frame = +1
Query: 412 HTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGR---------WNVTSILKGHTE 564
H+ V+SV N+N Q LS S D+T +W+++N R W V H+
Sbjct: 102 HSATVDSVMLFENNNKQFC--LSGSRDRTIRLWSIENARNGEDTEQNPWTVAKDDTAHSG 159
Query: 565 GVTNIYGNYHGDRLTVYTASTDSTIKVW 648
+ N+ YT S DST+K W
Sbjct: 160 WIWNMA--QESTSTNFYTTSWDSTVKSW 185
>AC024867-3|AAK68601.2| 327|Caenorhabditis elegans Eukaryotic
initiation factor protein3.I protein.
Length = 327
Score = 35.9 bits (79), Expect = 0.039
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +1
Query: 418 GHVNSVKWIH-NHNGQTTELLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNIYGNYH 594
GH ++ + N G T SC+ DK +W +NG + S GH V +I +
Sbjct: 8 GHERALTRVRFNREGDLT--FSCAKDKKPCVWYTENGE-RIGS-YDGHNGAVWDI--DVS 61
Query: 595 GDRLTVYTASTDSTIKVWE 651
D TAS D T+K+W+
Sbjct: 62 WDTTKCVTASGDLTVKIWD 80
>AF039711-10|AAB96707.2| 567|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 17 protein.
Length = 567
Score = 35.5 bits (78), Expect = 0.051
Identities = 27/103 (26%), Positives = 40/103 (38%)
Frame = +1
Query: 412 HTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNIYGNY 591
+ GH V ++ LSCS+D +W + + R V GH V + N
Sbjct: 271 YRGHNKGVNFLQWFPKSAHLFLSCSMDTKIKLWEVYD-RQRVVRTYAGHKLPVREVAFNN 329
Query: 592 HGDRLTVYTASTDSTIKVWERIEGTVTLKQSISLHSGLCLTLH 720
G +AS D +K+W+ G V + H CL H
Sbjct: 330 EGTEF--LSASFDRYVKLWDTETGQVKQRFHTG-HVPYCLKYH 369
>Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical
protein F08G12.2 protein.
Length = 331
Score = 34.7 bits (76), Expect = 0.089
Identities = 22/86 (25%), Positives = 43/86 (50%)
Frame = +1
Query: 388 DRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGRWNVTSILKGHTEG 567
+ + + H+G V +K+ + ++ L+SC DK+ +W ++ G + HT+
Sbjct: 72 ENFSTIKGHSGAVMDLKFTTD----SSSLVSCGTDKSVRVWDMETG--TCARRFRTHTDF 125
Query: 568 VTNIYGNYHGDRLTVYTASTDSTIKV 645
V ++ + G L V +AS D T +V
Sbjct: 126 VNAVHPSRRGVTL-VASASDDGTCRV 150
>AC024818-3|AAF60780.2| 453|Caenorhabditis elegans Hypothetical
protein Y54H5A.1 protein.
Length = 453
Score = 34.3 bits (75), Expect = 0.12
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = +1
Query: 415 TGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGRWN--VTSILKGHTEGVTNIYGN 588
TGH SV+ + +T L SCS D + +W ++ + V ++ K H V I N
Sbjct: 272 TGHKKSVEDLAWSPTETGLLASCSADGSIKLWDTRSAPKDACVCTVQKAHESDVNVISWN 331
Query: 589 YHGDRLTVYTASTDSTIKVW 648
H + + + D +K+W
Sbjct: 332 RHEN--LIVSGGDDGELKIW 349
>AC024770-5|AAK84605.2| 684|Caenorhabditis elegans Hypothetical
protein Y39H10A.6 protein.
Length = 684
Score = 34.3 bits (75), Expect = 0.12
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +1
Query: 412 HTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTL 516
H GHVN+V W + T L+SC D T +W+L
Sbjct: 564 HRGHVNAVAW---NPADPTMLVSCGADATIRVWSL 595
>U28730-7|AAA68258.2| 665|Caenorhabditis elegans Abnormal cell
lineage protein 23 protein.
Length = 665
Score = 33.9 bits (74), Expect = 0.16
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Frame = +1
Query: 472 LLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWE 651
++S S D+T +W++ + T L GH G+ + Y G RL V + S+D+TI++W+
Sbjct: 358 IVSASGDRTIKVWSMDTLEFVRT--LAGHRRGIACL--QYRG-RLVV-SGSSDNTIRLWD 411
Query: 652 RIEGTVTLKQSISLHSGLCLTL---HAQILPC 738
+HSG+CL + H +++ C
Sbjct: 412 -------------IHSGVCLRVLEGHEELVRC 430
Score = 33.5 bits (73), Expect = 0.21
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 2/109 (1%)
Frame = +1
Query: 328 IICYGACNAVV-VCDPNEKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAV 504
+I G+ +A V V D +T + + L HH V +++ NG +++CS D++
Sbjct: 274 VIISGSSDATVRVWDV--ETGECIKTLIHHCEAVLHLRFA---NGI---MVTCSKDRSIA 325
Query: 505 IWTLQNGR-WNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVW 648
+W + + R + +L GH V N+ DR V +AS D TIKVW
Sbjct: 326 VWDMVSPRDITIRRVLVGHRAAV-NVVD--FDDRYIV-SASGDRTIKVW 370
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = +1
Query: 490 DKTAVIWTLQNGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWE 651
D T IW ++ ++ + IL GHT V + Y D + + S+D+T++VW+
Sbjct: 241 DNTIKIWDRKD--YSCSRILSGHTGSVLCL--QY--DNRVIISGSSDATVRVWD 288
>AL110501-4|CAB54510.1| 368|Caenorhabditis elegans Hypothetical
protein Y79H2A.6 protein.
Length = 368
Score = 33.9 bits (74), Expect = 0.16
Identities = 17/62 (27%), Positives = 25/62 (40%)
Frame = +1
Query: 394 VTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVT 573
+ LS H V + W +T ++SCS DK A +WT W +L T
Sbjct: 51 IHTLSEHDLPVTGLDW----GTKTNRIVSCSQDKNAFVWTFDKNVWKPELVLVRFNRAAT 106
Query: 574 NI 579
+
Sbjct: 107 YV 108
>AF275253-1|AAG28037.1| 665|Caenorhabditis elegans LIN-23 protein.
Length = 665
Score = 33.9 bits (74), Expect = 0.16
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Frame = +1
Query: 472 LLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWE 651
++S S D+T +W++ + T L GH G+ + Y G RL V + S+D+TI++W+
Sbjct: 358 IVSASGDRTIKVWSMDTLEFVRT--LAGHRRGIACL--QYRG-RLVV-SGSSDNTIRLWD 411
Query: 652 RIEGTVTLKQSISLHSGLCLTL---HAQILPC 738
+HSG+CL + H +++ C
Sbjct: 412 -------------IHSGVCLRVLEGHEELVRC 430
Score = 33.5 bits (73), Expect = 0.21
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 2/109 (1%)
Frame = +1
Query: 328 IICYGACNAVV-VCDPNEKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAV 504
+I G+ +A V V D +T + + L HH V +++ NG +++CS D++
Sbjct: 274 VIISGSSDATVRVWDV--ETGECIKTLIHHCEAVLHLRFA---NGI---MVTCSKDRSIA 325
Query: 505 IWTLQNGR-WNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVW 648
+W + + R + +L GH V N+ DR V +AS D TIKVW
Sbjct: 326 VWDMVSPRDITIRRVLVGHRAAV-NVVD--FDDRYIV-SASGDRTIKVW 370
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = +1
Query: 490 DKTAVIWTLQNGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWE 651
D T IW ++ ++ + IL GHT V + Y D + + S+D+T++VW+
Sbjct: 241 DNTIKIWDRKD--YSCSRILSGHTGSVLCL--QY--DNRVIISGSSDATVRVWD 288
>Z81097-15|CAB03172.1| 412|Caenorhabditis elegans Hypothetical
protein K07A1.11 protein.
Length = 412
Score = 33.5 bits (73), Expect = 0.21
Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Frame = +1
Query: 379 KTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSC-SVDKTAVIWTLQNGRWNVTSILKG 555
++K ++T + H T VN + + N + +L+ SVDKT +W ++N R + + LK
Sbjct: 253 QSKPQLTAVGH-TAEVNCITF----NPFSEYILATGSVDKTVALWDMRNMRKKMYT-LKH 306
Query: 556 HTEGVTNIYGNYHGDRLTVYTASTDSTIKVWE 651
H + + + + H + + + S D I VW+
Sbjct: 307 HNDEIFQVSFSPHYETVLASSGSDDRVI-VWD 337
>AL132904-13|CAC35846.4| 778|Caenorhabditis elegans Hypothetical
protein Y111B2A.17 protein.
Length = 778
Score = 33.5 bits (73), Expect = 0.21
Identities = 38/130 (29%), Positives = 52/130 (40%), Gaps = 7/130 (5%)
Frame = +1
Query: 301 EVVDWNYEGIICYGACNAVVVCDPNEKTKDRVTV------LSHHTGHVNSVKWIHNHNGQ 462
E VD + + A V+ P E T + T+ L H V +V N
Sbjct: 517 ETVDGEHWEEDAFRAAPVVLTSPPTEDTLQQNTLWPEQHKLYGHGYEVYAVTANPTGNVL 576
Query: 463 TTELLSCSVDKTAV-IWTLQNGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTI 639
T S V+ + V +W+ N W+ S + GH VT I N G RL T S D T
Sbjct: 577 ATACKSSHVEHSVVMLWSTSN--WSKKSEIIGHQLTVTQIAWNPSGTRL--LTVSRDRTA 632
Query: 640 KVWERIEGTV 669
K++ G V
Sbjct: 633 KLYTEKNGEV 642
Score = 28.7 bits (61), Expect = 5.8
Identities = 25/97 (25%), Positives = 39/97 (40%), Gaps = 3/97 (3%)
Frame = +1
Query: 412 HTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGR---WNVTSILKGHTEGVTNIY 582
H V + W N T LL+ S D+TA ++T +NG ++ + + I+
Sbjct: 607 HQLTVTQIAW----NPSGTRLLTVSRDRTAKLYTEKNGEVDGFDYDCVWTSGKQHTRIIW 662
Query: 583 GNYHGDRLTVYTASTDSTIKVWERIEGTVTLKQSISL 693
D TAS D + VW G K ++ L
Sbjct: 663 ACDWIDDEHFVTASRDQKVIVWAESAGQTAPKATVKL 699
>Z81097-20|CAB03178.1| 417|Caenorhabditis elegans Hypothetical
protein K07A1.12 protein.
Length = 417
Score = 33.1 bits (72), Expect = 0.27
Identities = 16/60 (26%), Positives = 32/60 (53%)
Frame = +1
Query: 472 LLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWE 651
L + S DKT +W L+N R + S + H + + + + H + + + ++ TD + VW+
Sbjct: 281 LATGSADKTVALWDLRNLRMKLHS-FESHRDEIFQVQWSPHNETI-LASSGTDKRLHVWD 338
>Z80216-3|CAB02280.1| 373|Caenorhabditis elegans Hypothetical
protein F10G8.3 protein.
Length = 373
Score = 33.1 bits (72), Expect = 0.27
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +1
Query: 388 DRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQN 522
++V V+ H G V + WI+ +N Q L++ S DKT W ++N
Sbjct: 121 NQVAVVGTHDGPVKTCHWINGNNYQC--LMTGSFDKTLRFWDMKN 163
>AL023833-1|CAA19477.1| 417|Caenorhabditis elegans Hypothetical
protein K07A1.12 protein.
Length = 417
Score = 33.1 bits (72), Expect = 0.27
Identities = 16/60 (26%), Positives = 32/60 (53%)
Frame = +1
Query: 472 LLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWE 651
L + S DKT +W L+N R + S + H + + + + H + + + ++ TD + VW+
Sbjct: 281 LATGSADKTVALWDLRNLRMKLHS-FESHRDEIFQVQWSPHNETI-LASSGTDKRLHVWD 338
>AF116530-1|AAD05571.1| 417|Caenorhabditis elegans synthetic
multivulva protein LIN-53 p48 protein.
Length = 417
Score = 33.1 bits (72), Expect = 0.27
Identities = 16/60 (26%), Positives = 32/60 (53%)
Frame = +1
Query: 472 LLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWE 651
L + S DKT +W L+N R + S + H + + + + H + + + ++ TD + VW+
Sbjct: 281 LATGSADKTVALWDLRNLRMKLHS-FESHRDEIFQVQWSPHNETI-LASSGTDKRLHVWD 338
>AL021481-1|CAA16333.1| 363|Caenorhabditis elegans Hypothetical
protein Y43F4B.4 protein.
Length = 363
Score = 32.3 bits (70), Expect = 0.47
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Frame = +1
Query: 472 LLSCSVDKTAVIWTLQ-NGRWNVTSILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVW 648
+ +C+ D T IW + +G W ++ K H V + + V T S D TI +W
Sbjct: 32 MATCASDMTMAIWDRKPDGNWRRSAHWKCHGGAVWRVIWAHPEFGQIVATCSYDRTIVIW 91
Query: 649 ER--IEGTVTLKQSIS 690
E + LKQ S
Sbjct: 92 EEQIVRSEKDLKQKES 107
>U42833-5|AAA83580.1| 444|Caenorhabditis elegans Hypothetical
protein ZK430.7 protein.
Length = 444
Score = 31.5 bits (68), Expect = 0.83
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +1
Query: 418 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNI-YGNYH 594
GHV+ V+ + H + + + S + D IW L + T L H V +I N +
Sbjct: 64 GHVDGVQVLAKHPNRPSTVFSGARDGQVKIWNLASRECQAT--LDAHRGLVNDISIDNNN 121
Query: 595 GDRLTVYTASTDSTIKVWERIEG 663
G+ T D+ +K W +IEG
Sbjct: 122 GENFV--TVGQDNQLKYW-KIEG 141
>AC024857-1|AAK31566.2| 869|Caenorhabditis elegans Temporarily
assigned gene nameprotein 305 protein.
Length = 869
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/93 (20%), Positives = 37/93 (39%)
Frame = +1
Query: 259 VEQVYTSVACNRKPEVVDWNYEGIICYGACNAVVVCDPNEKTKDRVTVLSHHTGHVNSVK 438
+EQ T ++ ++ + D G+ V + D D + GH N+++
Sbjct: 14 IEQTITHLSWIQQQDKPDHGLLGVGTETGSVGVTLTDFKPTPDDLTRYNFNLRGHHNAIR 73
Query: 439 WIHNHNGQTTELLSCSVDKTAVIWTLQNGRWNV 537
+ N ++L SC +W + RW+V
Sbjct: 74 MV-TWNKSQSKLASCDASGIIYVWVRNDDRWSV 105
>U80447-5|AAB37809.1| 439|Caenorhabditis elegans Temporarily
assigned gene nameprotein 345 protein.
Length = 439
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +1
Query: 379 KTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQ 519
KTK + + H V++V+W ++G SCS D T V W L+
Sbjct: 267 KTKVPMVTIGGHRDKVSAVEWCPWNSGHA---FSCSWDHTIVEWDLE 310
>Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical
protein C14B1.4 protein.
Length = 376
Score = 29.1 bits (62), Expect = 4.4
Identities = 27/101 (26%), Positives = 49/101 (48%)
Frame = +1
Query: 379 KTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGRWNVTSILKGH 558
KT + L H+ V++V + N +G + S S D IW NG+ + +++
Sbjct: 201 KTGMCIKTLPAHSDPVSAVSF--NRDGSL--IASGSYDGLVRIWDTANGQC-IKTLVDDE 255
Query: 559 TEGVTNIYGNYHGDRLTVYTASTDSTIKVWERIEGTVTLKQ 681
V + + +G + ++ DST+K+W+ +G TLKQ
Sbjct: 256 NPPVAFVKFSPNGKY--ILASNLDSTLKLWDFSKGK-TLKQ 293
>AY733040-1|AAW57534.1| 1425|Caenorhabditis elegans death-associated
protein kinase protein.
Length = 1425
Score = 29.1 bits (62), Expect = 4.4
Identities = 26/102 (25%), Positives = 47/102 (46%)
Frame = +1
Query: 418 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNIYGNYHG 597
GHV+ V+ + + N + KTA+I L+NG ++ SIL T G + ++HG
Sbjct: 536 GHVDCVQALLDANSPIDAVEQDG--KTALIIALENGNVDIASIL--ITNGCDINHADHHG 591
Query: 598 DRLTVYTASTDSTIKVWERIEGTVTLKQSISLHSGLCLTLHA 723
D ++ AS ++ + + S++ + L L A
Sbjct: 592 D-TALHIASKHGLLQAVQTLCHCAVTVDSVNANKKTALHLAA 632
>AF043701-1|AAK18971.2| 1425|Caenorhabditis elegans Dap
(death-associated protein)kinase homolog protein 1
protein.
Length = 1425
Score = 29.1 bits (62), Expect = 4.4
Identities = 26/102 (25%), Positives = 47/102 (46%)
Frame = +1
Query: 418 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNIYGNYHG 597
GHV+ V+ + + N + KTA+I L+NG ++ SIL T G + ++HG
Sbjct: 536 GHVDCVQALLDANSPIDAVEQDG--KTALIIALENGNVDIASIL--ITNGCDINHADHHG 591
Query: 598 DRLTVYTASTDSTIKVWERIEGTVTLKQSISLHSGLCLTLHA 723
D ++ AS ++ + + S++ + L L A
Sbjct: 592 D-TALHIASKHGLLQAVQTLCHCAVTVDSVNANKKTALHLAA 632
>Z81099-1|CAB03187.1| 600|Caenorhabditis elegans Hypothetical
protein K08F9.2 protein.
Length = 600
Score = 28.7 bits (61), Expect = 5.8
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 7/100 (7%)
Frame = +1
Query: 409 HHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNG-RWNVTSILKG--HTEGVTNI 579
HH V S ++ N++G S D T V++ +G + V KG HT + +
Sbjct: 188 HHKKFVQSTRY--NNDGSL--FASTGSDGTVVLYNGVDGEKVGVLEDAKGVAHTGSIFAL 243
Query: 580 YGNYHGDRLTVYTASTDSTIKVWE----RIEGTVTLKQSI 687
+ D+ + TAS D ++K+W+ ++E T+ + I
Sbjct: 244 A--WSPDQSRIATASADKSVKIWDVSARKLERTIVMGSKI 281
>Z68315-3|CAA92670.1| 430|Caenorhabditis elegans Hypothetical
protein F28C6.3 protein.
Length = 430
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +1
Query: 556 HTEGVTNIYGNYHGDRLTVYTASTDSTIKVWERI 657
HTE VT+++ + + RL V TAS D +K+W+ +
Sbjct: 258 HTESVTDVHYSENA-RLYV-TASKDGHVKIWDGV 289
>Z68222-10|CAA92505.3| 1701|Caenorhabditis elegans Hypothetical
protein ZK1251.9 protein.
Length = 1701
Score = 28.3 bits (60), Expect = 7.7
Identities = 23/68 (33%), Positives = 33/68 (48%)
Frame = +1
Query: 436 KWIHNHNGQTTELLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNIYGNYHGDRLTVY 615
K IH+H+ T+ + SVD +I L NG + ++ G EG TN HG LT
Sbjct: 1082 KTIHDHDESYTKA-TFSVDDEHLIVGLFNGEVHWINVDTGLDEGHTNC----HGSALTNI 1136
Query: 616 TASTDSTI 639
S D ++
Sbjct: 1137 EPSKDGSM 1144
>Z68218-5|CAA92475.3| 1701|Caenorhabditis elegans Hypothetical protein
ZK1251.9 protein.
Length = 1701
Score = 28.3 bits (60), Expect = 7.7
Identities = 23/68 (33%), Positives = 33/68 (48%)
Frame = +1
Query: 436 KWIHNHNGQTTELLSCSVDKTAVIWTLQNGRWNVTSILKGHTEGVTNIYGNYHGDRLTVY 615
K IH+H+ T+ + SVD +I L NG + ++ G EG TN HG LT
Sbjct: 1082 KTIHDHDESYTKA-TFSVDDEHLIVGLFNGEVHWINVDTGLDEGHTNC----HGSALTNI 1136
Query: 616 TASTDSTI 639
S D ++
Sbjct: 1137 EPSKDGSM 1144
>Z49912-7|CAI70412.1| 554|Caenorhabditis elegans Hypothetical
protein T24F1.3b protein.
Length = 554
Score = 28.3 bits (60), Expect = 7.7
Identities = 9/38 (23%), Positives = 22/38 (57%)
Frame = -1
Query: 572 VTPSVCPLRILVTFQRPFCNVQMTAVLSTEQESNSVVW 459
++ CPL++++ +Q P C A++ E ++ ++W
Sbjct: 406 ISDDACPLKVVLNWQSPHCG---RALVLQENDTGDILW 440
>Z49912-6|CAA90137.1| 615|Caenorhabditis elegans Hypothetical
protein T24F1.3a protein.
Length = 615
Score = 28.3 bits (60), Expect = 7.7
Identities = 9/38 (23%), Positives = 22/38 (57%)
Frame = -1
Query: 572 VTPSVCPLRILVTFQRPFCNVQMTAVLSTEQESNSVVW 459
++ CPL++++ +Q P C A++ E ++ ++W
Sbjct: 467 ISDDACPLKVVLNWQSPHCG---RALVLQENDTGDILW 501
>U53340-3|AAA96208.1| 578|Caenorhabditis elegans Hypothetical
protein F02E8.5 protein.
Length = 578
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +1
Query: 394 VTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGR 528
++ LS H+ V VK+ +H+ +S S D+ IW +QN R
Sbjct: 371 LSTLSGHSDQVTCVKFYQSHSA-----VSGSADRVIKIWDIQNQR 410
>AF101313-1|AAC69223.1| 1802|Caenorhabditis elegans Abc transporter
family protein 4 protein.
Length = 1802
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -3
Query: 477 EQLCCLAIVIVYPFYRVYVSCMVTQYCY-SIFSFFIRITNNNSITGT 340
E LC ++VY +R Y SC + Y S ++ IR+ N N T
Sbjct: 1644 EALCTELAIMVYGKFRCYGSCQHIKSRYGSGYTLLIRLKNRNDAEKT 1690
>AF101309-3|AAN60514.1| 760|Caenorhabditis elegans Hypothetical
protein H24G06.1c protein.
Length = 760
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/37 (27%), Positives = 23/37 (62%)
Frame = +1
Query: 541 SILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWE 651
++L GH + +I + +L +YTA++D ++ +W+
Sbjct: 564 AVLDGHQSAIKSIKFASNNGQLHLYTAASDRSLIIWK 600
>AF101309-2|AAL32230.1| 1601|Caenorhabditis elegans Hypothetical
protein H24G06.1b protein.
Length = 1601
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/37 (27%), Positives = 23/37 (62%)
Frame = +1
Query: 541 SILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWE 651
++L GH + +I + +L +YTA++D ++ +W+
Sbjct: 564 AVLDGHQSAIKSIKFASNNGQLHLYTAASDRSLIIWK 600
>AF101309-1|AAL32229.1| 1680|Caenorhabditis elegans Hypothetical
protein H24G06.1a protein.
Length = 1680
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/37 (27%), Positives = 23/37 (62%)
Frame = +1
Query: 541 SILKGHTEGVTNIYGNYHGDRLTVYTASTDSTIKVWE 651
++L GH + +I + +L +YTA++D ++ +W+
Sbjct: 564 AVLDGHQSAIKSIKFASNNGQLHLYTAASDRSLIIWK 600
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,825,010
Number of Sequences: 27780
Number of extensions: 397086
Number of successful extensions: 1346
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 1194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1320
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -