Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_M24
         (887 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X87248-1|CAA60698.1|  341|Homo sapiens HP8 peptide protein.            31   4.2  
M55210-1|AAA59492.1| 1609|Homo sapiens laminin B2 chain protein.       31   7.4  
J03202-1|AAA59488.1| 1609|Homo sapiens LAMB2 protein.                  31   7.4  
AL450304-5|CAI14877.1| 1609|Homo sapiens laminin, gamma 1 (forme...    31   7.4  
AL354953-3|CAH70981.1| 1609|Homo sapiens laminin, gamma 1 (forme...    31   7.4  
AF244812-1|AAG34567.1|  306|Homo sapiens SCAN domain-containing ...    30   9.8  
AF229246-1|AAG33966.1|  306|Homo sapiens SCAND2 protein.               30   9.8  

>X87248-1|CAA60698.1|  341|Homo sapiens HP8 peptide protein.
          Length = 341

 Score = 31.5 bits (68), Expect = 4.2
 Identities = 20/53 (37%), Positives = 23/53 (43%)
 Frame = -3

Query: 228 LHRSADDVEGNVLSAARADYQWNRSRQRGAAAGGVPLYPRARPSPRERDSTRG 70
           LHR    V G  + A  A  +    R   AAA    L  RARP  R R + RG
Sbjct: 58  LHRPGRPVPGRPVPAQPAAGEGQGGRGPRAAAAAATLTTRARPRARRRRTARG 110


>M55210-1|AAA59492.1| 1609|Homo sapiens laminin B2 chain protein.
          Length = 1609

 Score = 30.7 bits (66), Expect = 7.4
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +2

Query: 722 KQLYFVYIDIAVGGRCSCN 778
           K  Y+   D AVGGRC CN
Sbjct: 271 KSYYYAISDFAVGGRCKCN 289


>J03202-1|AAA59488.1| 1609|Homo sapiens LAMB2 protein.
          Length = 1609

 Score = 30.7 bits (66), Expect = 7.4
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +2

Query: 722 KQLYFVYIDIAVGGRCSCN 778
           K  Y+   D AVGGRC CN
Sbjct: 271 KSYYYAISDFAVGGRCKCN 289


>AL450304-5|CAI14877.1| 1609|Homo sapiens laminin, gamma 1 (formerly
           LAMB2) protein.
          Length = 1609

 Score = 30.7 bits (66), Expect = 7.4
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +2

Query: 722 KQLYFVYIDIAVGGRCSCN 778
           K  Y+   D AVGGRC CN
Sbjct: 271 KSYYYAISDFAVGGRCKCN 289


>AL354953-3|CAH70981.1| 1609|Homo sapiens laminin, gamma 1 (formerly
           LAMB2) protein.
          Length = 1609

 Score = 30.7 bits (66), Expect = 7.4
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +2

Query: 722 KQLYFVYIDIAVGGRCSCN 778
           K  Y+   D AVGGRC CN
Sbjct: 271 KSYYYAISDFAVGGRCKCN 289


>AF244812-1|AAG34567.1|  306|Homo sapiens SCAN domain-containing
           protein 2 protein.
          Length = 306

 Score = 30.3 bits (65), Expect = 9.8
 Identities = 13/25 (52%), Positives = 13/25 (52%)
 Frame = -3

Query: 165 WNRSRQRGAAAGGVPLYPRARPSPR 91
           W   RQRGA        PR RPSPR
Sbjct: 238 WRPGRQRGAGTAPPGTQPRQRPSPR 262


>AF229246-1|AAG33966.1|  306|Homo sapiens SCAND2 protein.
          Length = 306

 Score = 30.3 bits (65), Expect = 9.8
 Identities = 13/25 (52%), Positives = 13/25 (52%)
 Frame = -3

Query: 165 WNRSRQRGAAAGGVPLYPRARPSPR 91
           W   RQRGA        PR RPSPR
Sbjct: 238 WRPGRQRGAGTAPPGTQPRQRPSPR 262


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,828,706
Number of Sequences: 237096
Number of extensions: 2570652
Number of successful extensions: 9910
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9651
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9906
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)