Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_M24
         (887 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-3565|ABI31336.1|  107|Drosophila melanogaster CG41436-P...    30   3.7  
AY058592-1|AAL13821.1| 1311|Drosophila melanogaster LD28477p pro...    29   8.6  
AF217802-1|AAG40586.1| 1311|Drosophila melanogaster xnp/atr-x DN...    29   8.6  
AE014297-3805|AAN14055.1| 1311|Drosophila melanogaster CG4548-PB...    29   8.6  
AE014297-3804|AAF56471.1| 1311|Drosophila melanogaster CG4548-PA...    29   8.6  

>AE014134-3565|ABI31336.1|  107|Drosophila melanogaster CG41436-PA
           protein.
          Length = 107

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 15/44 (34%), Positives = 20/44 (45%)
 Frame = -1

Query: 224 IARRTTWKVTSCRQPARTINGTGRGSGAQRRAASHSIRAPGPRR 93
           IA  + W +TSC+   +   GTG G  A+     HS     P R
Sbjct: 58  IANVSKWIITSCQLSYQRYTGTGLGKWAETHTEPHSKAQDTPGR 101


>AY058592-1|AAL13821.1| 1311|Drosophila melanogaster LD28477p
           protein.
          Length = 1311

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = -1

Query: 197 TSCRQPARTINGTGRGS-GAQRRAASHSIRAPGPRRENATV 78
           TS  +  R++NGT RGS  ++R + + S RA  P R    V
Sbjct: 206 TSSARAIRSVNGTRRGSLSSERSSRASSSRAESPPRPKRCV 246


>AF217802-1|AAG40586.1| 1311|Drosophila melanogaster xnp/atr-x DNA
           helicase protein.
          Length = 1311

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = -1

Query: 197 TSCRQPARTINGTGRGS-GAQRRAASHSIRAPGPRRENATV 78
           TS  +  R++NGT RGS  ++R + + S RA  P R    V
Sbjct: 206 TSSARAIRSVNGTRRGSLSSERSSRASSSRAESPPRPKRCV 246


>AE014297-3805|AAN14055.1| 1311|Drosophila melanogaster CG4548-PB,
           isoform B protein.
          Length = 1311

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = -1

Query: 197 TSCRQPARTINGTGRGS-GAQRRAASHSIRAPGPRRENATV 78
           TS  +  R++NGT RGS  ++R + + S RA  P R    V
Sbjct: 206 TSSARAIRSVNGTRRGSLSSERSSRASSSRAESPPRPKRCV 246


>AE014297-3804|AAF56471.1| 1311|Drosophila melanogaster CG4548-PA,
           isoform A protein.
          Length = 1311

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = -1

Query: 197 TSCRQPARTINGTGRGS-GAQRRAASHSIRAPGPRRENATV 78
           TS  +  R++NGT RGS  ++R + + S RA  P R    V
Sbjct: 206 TSSARAIRSVNGTRRGSLSSERSSRASSSRAESPPRPKRCV 246


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,904,237
Number of Sequences: 53049
Number of extensions: 804568
Number of successful extensions: 2341
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2027
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2338
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4332305172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)