Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_M17
(893 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48615-1|CAA88531.1| 953|Homo sapiens serine/threonine kinase w... 32 3.2
X90846-1|CAA62351.1| 954|Homo sapiens mixed lineage kinase 2 pr... 32 3.2
BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein. 31 4.3
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 31 4.3
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 31 4.3
AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein pro... 31 4.3
AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein pro... 31 4.3
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 31 4.3
Y11251-1|CAA72121.1| 1148|Homo sapiens SRrp129 protein. 31 5.6
BC033589-1|AAH33589.1| 897|Homo sapiens Unknown (protein for IM... 31 5.6
AK092711-1|BAC03955.1| 149|Homo sapiens protein ( Homo sapiens ... 31 5.6
AF137396-7|AAG41681.1| 326|Homo sapiens HOR5'Beta7 protein. 31 5.6
AF030234-1|AAC39565.1| 1148|Homo sapiens splicing factor Sip1 pr... 31 5.6
>Z48615-1|CAA88531.1| 953|Homo sapiens serine/threonine kinase with
SH3 domain, leucine zipper domain and proline rich
protein.
Length = 953
Score = 31.9 bits (69), Expect = 3.2
Identities = 23/94 (24%), Positives = 38/94 (40%)
Frame = -2
Query: 787 LGANDLHRTEIPTA*AMRKRHASRREKGGQVSGKRQGRNRRAQRGSFQGETPGIFIVLSG 608
+G RT P++ ++R G G +Q + G TP + G
Sbjct: 549 VGGKKKGRTWGPSSTLQKERVGGEERLKGLGEGSKQWSSSAPNLGKSPKHTP----IAPG 604
Query: 607 FATSDLSVDFCDARQGGGAYGKTPATRPFYGSWP 506
FA+ + +F +A GG + +P + P Y S P
Sbjct: 605 FASLNEMEEFAEAEDGGSSVPPSPYSTPSYLSVP 638
>X90846-1|CAA62351.1| 954|Homo sapiens mixed lineage kinase 2
protein.
Length = 954
Score = 31.9 bits (69), Expect = 3.2
Identities = 23/94 (24%), Positives = 38/94 (40%)
Frame = -2
Query: 787 LGANDLHRTEIPTA*AMRKRHASRREKGGQVSGKRQGRNRRAQRGSFQGETPGIFIVLSG 608
+G RT P++ ++R G G +Q + G TP + G
Sbjct: 550 VGGKKKGRTWGPSSTLQKERVGGEERLKGLGEGSKQWSSSAPNLGKSPKHTP----IAPG 605
Query: 607 FATSDLSVDFCDARQGGGAYGKTPATRPFYGSWP 506
FA+ + +F +A GG + +P + P Y S P
Sbjct: 606 FASLNEMEEFAEAEDGGSSVPPSPYSTPSYLSVP 639
>BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein.
Length = 1022
Score = 31.5 bits (68), Expect = 4.3
Identities = 28/103 (27%), Positives = 41/103 (39%), Gaps = 2/103 (1%)
Frame = -2
Query: 829 RSGRAERGFVHTAQLGANDLHRTEIPTA*AM-RKRHASRREKGGQVSGKRQGRNRR-AQR 656
RS A RG H+ R+ P R R +RR + +R+ R+R A+R
Sbjct: 553 RSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARR 612
Query: 655 GSFQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATR 527
G + TP + S AR+ G + +TPA R
Sbjct: 613 GRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARR 655
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator
subunit SRm300 protein.
Length = 2296
Score = 31.5 bits (68), Expect = 4.3
Identities = 28/103 (27%), Positives = 41/103 (39%), Gaps = 2/103 (1%)
Frame = -2
Query: 829 RSGRAERGFVHTAQLGANDLHRTEIPTA*AM-RKRHASRREKGGQVSGKRQGRNRR-AQR 656
RS A RG H+ R+ P R R +RR + +R+ R+R A+R
Sbjct: 553 RSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARR 612
Query: 655 GSFQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATR 527
G + TP + S AR+ G + +TPA R
Sbjct: 613 GRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARR 655
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein
protein.
Length = 2752
Score = 31.5 bits (68), Expect = 4.3
Identities = 28/103 (27%), Positives = 41/103 (39%), Gaps = 2/103 (1%)
Frame = -2
Query: 829 RSGRAERGFVHTAQLGANDLHRTEIPTA*AM-RKRHASRREKGGQVSGKRQGRNRR-AQR 656
RS A RG H+ R+ P R R +RR + +R+ R+R A+R
Sbjct: 553 RSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARR 612
Query: 655 GSFQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATR 527
G + TP + S AR+ G + +TPA R
Sbjct: 613 GRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARR 655
>AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein
protein.
Length = 956
Score = 31.5 bits (68), Expect = 4.3
Identities = 28/103 (27%), Positives = 41/103 (39%), Gaps = 2/103 (1%)
Frame = -2
Query: 829 RSGRAERGFVHTAQLGANDLHRTEIPTA*AM-RKRHASRREKGGQVSGKRQGRNRR-AQR 656
RS A RG H+ R+ P R R +RR + +R+ R+R A+R
Sbjct: 518 RSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARR 577
Query: 655 GSFQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATR 527
G + TP + S AR+ G + +TPA R
Sbjct: 578 GRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARR 620
>AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein
protein.
Length = 1262
Score = 31.5 bits (68), Expect = 4.3
Identities = 28/103 (27%), Positives = 41/103 (39%), Gaps = 2/103 (1%)
Frame = -2
Query: 829 RSGRAERGFVHTAQLGANDLHRTEIPTA*AM-RKRHASRREKGGQVSGKRQGRNRR-AQR 656
RS A RG H+ R+ P R R +RR + +R+ R+R A+R
Sbjct: 343 RSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARR 402
Query: 655 GSFQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATR 527
G + TP + S AR+ G + +TPA R
Sbjct: 403 GRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARR 445
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 31.5 bits (68), Expect = 4.3
Identities = 28/103 (27%), Positives = 41/103 (39%), Gaps = 2/103 (1%)
Frame = -2
Query: 829 RSGRAERGFVHTAQLGANDLHRTEIPTA*AM-RKRHASRREKGGQVSGKRQGRNRR-AQR 656
RS A RG H+ R+ P R R +RR + +R+ R+R A+R
Sbjct: 601 RSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARR 660
Query: 655 GSFQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATR 527
G + TP + S AR+ G + +TPA R
Sbjct: 661 GRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARR 703
>Y11251-1|CAA72121.1| 1148|Homo sapiens SRrp129 protein.
Length = 1148
Score = 31.1 bits (67), Expect = 5.6
Identities = 21/56 (37%), Positives = 27/56 (48%)
Frame = -1
Query: 863 PGXSPXDSTDKAQRSG*TGVRAHSPAWSERPTPN*DTYSVSYEKAPRFPKGERRTG 696
P SP D+ DK ++ R HSP S +PN DT +K P+ P R TG
Sbjct: 458 PSESPKDTIDKTKKPRTRRSRFHSP--STTWSPNKDT--PQEKKRPQSPSPRRETG 509
>BC033589-1|AAH33589.1| 897|Homo sapiens Unknown (protein for
IMAGE:4536747) protein.
Length = 897
Score = 31.1 bits (67), Expect = 5.6
Identities = 21/56 (37%), Positives = 27/56 (48%)
Frame = -1
Query: 863 PGXSPXDSTDKAQRSG*TGVRAHSPAWSERPTPN*DTYSVSYEKAPRFPKGERRTG 696
P SP D+ DK ++ R HSP S +PN DT +K P+ P R TG
Sbjct: 670 PSESPKDTIDKTKKPRTRRSRFHSP--STTWSPNKDT--PQEKKRPQSPSPRRETG 721
>AK092711-1|BAC03955.1| 149|Homo sapiens protein ( Homo sapiens
cDNA FLJ35392 fis, clone SKNSH2000716. ).
Length = 149
Score = 31.1 bits (67), Expect = 5.6
Identities = 20/39 (51%), Positives = 20/39 (51%)
Frame = -2
Query: 568 RQGGGAYGKTPATRPFYGSWPFAGLLLTCSFLRYXPDSV 452
RQ G G A R F S P GLL CS LR PDSV
Sbjct: 69 RQHFGIPGYPEAARDFSSS-PAPGLLTLCSRLRAKPDSV 106
>AF137396-7|AAG41681.1| 326|Homo sapiens HOR5'Beta7 protein.
Length = 326
Score = 31.1 bits (67), Expect = 5.6
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = +2
Query: 662 RSPVPTLPLTGYLSAFLPSGSVALSHS 742
R PV T+P+ L AF GSV LSHS
Sbjct: 163 RGPVATIPIVLLLKAFPYCGSVVLSHS 189
>AF030234-1|AAC39565.1| 1148|Homo sapiens splicing factor Sip1
protein.
Length = 1148
Score = 31.1 bits (67), Expect = 5.6
Identities = 21/56 (37%), Positives = 27/56 (48%)
Frame = -1
Query: 863 PGXSPXDSTDKAQRSG*TGVRAHSPAWSERPTPN*DTYSVSYEKAPRFPKGERRTG 696
P SP D+ DK ++ R HSP S +PN DT +K P+ P R TG
Sbjct: 458 PSESPKDTIDKTKKPRTRRSRFHSP--STTWSPNKDT--PQEKKRPQSPSPRRETG 509
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,988,960
Number of Sequences: 237096
Number of extensions: 2648036
Number of successful extensions: 12318
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 11797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12308
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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