Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_M16
         (872 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    25   2.3  
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    25   2.3  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   3.0  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            25   3.0  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       25   3.0  
AY787484-1|AAV87217.1|   70|Anopheles gambiae GABA receptor subu...    23   9.2  

>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +3

Query: 492 ISGYMSSRSKYEITGSILSVSFNCST 569
           +S Y+S+RS    TGS LS  F C++
Sbjct: 645 LSSYLSNRSCRVKTGSYLSEEFFCTS 670


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
 Frame = -3

Query: 750 ADXSVKVPSP----SGTTKCMPPWGDSSENSIPILSPRPSPTK 634
           AD    +PSP    SG+    P  G  + +S P ++PRP+P K
Sbjct: 152 ADGLHSIPSPPITVSGSDMSSP--GAPTGSSSPQITPRPTPVK 192


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 25.0 bits (52), Expect = 3.0
 Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
 Frame = +2

Query: 575 QTLDHN-SGELHIQIPEEAAHLVGEGRGLRIGIEFSLESPQGGMHFVV-PEG 724
           +TL +  S  LH    E+  HL    +     +EF  E P G M  ++ P G
Sbjct: 637 RTLSYQQSAVLHYVQQEDKVHLKRITQQSHTALEFDYEGPNGAMSKIIYPNG 688


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 25.0 bits (52), Expect = 3.0
 Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
 Frame = +2

Query: 575 QTLDHN-SGELHIQIPEEAAHLVGEGRGLRIGIEFSLESPQGGMHFVV-PEG 724
           +TL +  S  LH    E+  HL    +     +EF  E P G M  ++ P G
Sbjct: 638 RTLSYQQSAVLHYVQQEDKVHLKRITQQSHTALEFDYEGPNGAMSKIIYPNG 689


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 25.0 bits (52), Expect = 3.0
 Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = -2

Query: 580  GLSSVLQLNDTERMLPV-ISYLDRLDIYPEMGQ 485
            G+S VL++ D+  MLP   ++    D  P++GQ
Sbjct: 947  GMSLVLKVGDSSEMLPAPANFPTCYDFKPKLGQ 979


>AY787484-1|AAV87217.1|   70|Anopheles gambiae GABA receptor subunit
           protein.
          Length = 70

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -2

Query: 577 LSSVLQLNDTERMLPVISYLDRLDIY 500
           L+    ++ T   LP ISY+  +D+Y
Sbjct: 39  LTMTTLMSSTNAALPKISYVKSIDVY 64


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 893,857
Number of Sequences: 2352
Number of extensions: 18627
Number of successful extensions: 72
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 72
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93439926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)