Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_M06
         (871 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase...    27   0.56 
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    27   0.98 
DQ182013-1|ABA56305.1|   75|Anopheles gambiae G(alpha)c protein.       26   1.3  
U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase...    25   3.0  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    24   6.9  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           24   6.9  
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    23   9.2  
AY280613-1|AAQ21366.1|  257|Anopheles gambiae carbonic anhydrase...    23   9.2  

>U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 260

 Score = 27.5 bits (58), Expect = 0.56
 Identities = 16/31 (51%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = +3

Query: 744 VSQFGVGRSLQA-GLCARTPRSARPLRPYLV 833
           VS   V R L A G CAR PR  R L P+ V
Sbjct: 17  VSAKTVSRRLHAAGFCARRPRKVRKLLPHHV 47


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 26.6 bits (56), Expect = 0.98
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = -2

Query: 477 SHVLSCVITLILWITVLPPLSELIPLAA 394
           S +LS V+ L+L   +LPP S ++PL A
Sbjct: 269 SILLSLVVFLLLVSKILPPTSLVLPLIA 296


>DQ182013-1|ABA56305.1|   75|Anopheles gambiae G(alpha)c protein.
          Length = 75

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +1

Query: 115 YIDEFGQTTTRMQ*KKCFICEICDAIALFVT 207
           ++D  GQ T R +  KCF C +   + L  T
Sbjct: 13  FVDVGGQRTQRQKWTKCFDCSVTSILFLVST 43


>U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 332

 Score = 25.0 bits (52), Expect = 3.0
 Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = +3

Query: 744 VSQFGVGRSLQA-GLCARTPRSARPLRPYLV 833
           VS   V R L A G CAR PR  R L+ + V
Sbjct: 89  VSAKTVSRRLHAAGFCARRPRKVRKLQHHHV 119


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 23.8 bits (49), Expect = 6.9
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 792 RTPRSARPLRPYLVTIVLSPP 854
           RTP S+ PL P  +  +++PP
Sbjct: 458 RTPSSSPPLTPNTICGLIAPP 478


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 23.8 bits (49), Expect = 6.9
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = -2

Query: 195 SNSITNFTNKAFFSLHS 145
           SN+I NFT KAF  L S
Sbjct: 520 SNNIENFTRKAFKDLPS 536


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 508 YGSWPFAGLLLTCSFLRYHPDSVDN 434
           +GSW + G ++    L+  PDS DN
Sbjct: 166 FGSWTYDGYMVDLRHLQQTPDS-DN 189


>AY280613-1|AAQ21366.1|  257|Anopheles gambiae carbonic anhydrase
           alternate isoform protein.
          Length = 257

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 15/52 (28%), Positives = 21/52 (40%)
 Frame = +3

Query: 690 SAFLPSGSVALSHSSRW*VSQFGVGRSLQAGLCARTPRSARPLRPYLVTIVL 845
           S  +  G   L +   W     G  + +  G  A    S RP RP++V  VL
Sbjct: 19  STVIRDGIQPLDYFGHW--DGLGKAKMVNTGSSAMITFSDRPFRPFIVGGVL 68


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 873,966
Number of Sequences: 2352
Number of extensions: 17821
Number of successful extensions: 29
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93026475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)