Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_M06
         (871 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC142728-1|AAI42729.1|  417|Homo sapiens SAMD14 protein protein.       32   3.1  
BC141822-1|AAI41823.1|  417|Homo sapiens SAMD14 protein protein.       32   3.1  
BC064495-1|AAH64495.1|  299|Homo sapiens RCOR1 protein protein.        32   3.1  
BC051003-1|AAH51003.1|  293|Homo sapiens RCOR1 protein protein.        32   3.1  
BC047081-1|AAH47081.1|  427|Homo sapiens SAMD14 protein protein.       32   3.1  
BC029872-1|AAH29872.1|  247|Homo sapiens SAMD14 protein protein.       32   3.1  
AF155595-1|AAF01498.1|  482|Homo sapiens CoREST protein protein.       32   3.1  
AF137396-7|AAG41681.1|  326|Homo sapiens HOR5'Beta7 protein.           31   4.1  
AK123478-1|BAC85623.1|  124|Homo sapiens protein ( Homo sapiens ...    30   9.5  

>BC142728-1|AAI42729.1|  417|Homo sapiens SAMD14 protein protein.
          Length = 417

 Score = 31.9 bits (69), Expect = 3.1
 Identities = 18/53 (33%), Positives = 23/53 (43%)
 Frame = +2

Query: 482 KASKRPGTVKRPRCWRFSIRLRPPXRASQKSTLKSEVAKPDRTIKIPGVSPWK 640
           K S   G+   P C        P   ASQ+STL  +   P  + KIP   PW+
Sbjct: 246 KGSASSGSTTSPTCSPKHEGFSPKKSASQESTLSDDSTPPSSSPKIPS-GPWQ 297


>BC141822-1|AAI41823.1|  417|Homo sapiens SAMD14 protein protein.
          Length = 417

 Score = 31.9 bits (69), Expect = 3.1
 Identities = 18/53 (33%), Positives = 23/53 (43%)
 Frame = +2

Query: 482 KASKRPGTVKRPRCWRFSIRLRPPXRASQKSTLKSEVAKPDRTIKIPGVSPWK 640
           K S   G+   P C        P   ASQ+STL  +   P  + KIP   PW+
Sbjct: 246 KGSASSGSTTSPTCSPKHEGFSPKKSASQESTLSDDSTPPSSSPKIPS-GPWQ 297


>BC064495-1|AAH64495.1|  299|Homo sapiens RCOR1 protein protein.
          Length = 299

 Score = 31.9 bits (69), Expect = 3.1
 Identities = 18/43 (41%), Positives = 24/43 (55%)
 Frame = -3

Query: 701 EKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT*AS 573
           EKG +VSGKR+GRN  A   ++      +  +C  SP  T AS
Sbjct: 3   EKGPEVSGKRRGRNNAAASASAAAASAAASAAC-ASPAATAAS 44


>BC051003-1|AAH51003.1|  293|Homo sapiens RCOR1 protein protein.
          Length = 293

 Score = 31.9 bits (69), Expect = 3.1
 Identities = 18/43 (41%), Positives = 24/43 (55%)
 Frame = -3

Query: 701 EKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT*AS 573
           EKG +VSGKR+GRN  A   ++      +  +C  SP  T AS
Sbjct: 3   EKGPEVSGKRRGRNNAAASASAAAASAAASAAC-ASPAATAAS 44


>BC047081-1|AAH47081.1|  427|Homo sapiens SAMD14 protein protein.
          Length = 427

 Score = 31.9 bits (69), Expect = 3.1
 Identities = 18/53 (33%), Positives = 23/53 (43%)
 Frame = +2

Query: 482 KASKRPGTVKRPRCWRFSIRLRPPXRASQKSTLKSEVAKPDRTIKIPGVSPWK 640
           K S   G+   P C        P   ASQ+STL  +   P  + KIP   PW+
Sbjct: 256 KGSASSGSTTSPTCSPKHEGFSPKKSASQESTLSDDSTPPSSSPKIPS-GPWQ 307


>BC029872-1|AAH29872.1|  247|Homo sapiens SAMD14 protein protein.
          Length = 247

 Score = 31.9 bits (69), Expect = 3.1
 Identities = 18/53 (33%), Positives = 23/53 (43%)
 Frame = +2

Query: 482 KASKRPGTVKRPRCWRFSIRLRPPXRASQKSTLKSEVAKPDRTIKIPGVSPWK 640
           K S   G+   P C        P   ASQ+STL  +   P  + KIP   PW+
Sbjct: 76  KGSASSGSTTSPTCSPKHEGFSPKKSASQESTLSDDSTPPSSSPKIPS-GPWQ 127


>AF155595-1|AAF01498.1|  482|Homo sapiens CoREST protein protein.
          Length = 482

 Score = 31.9 bits (69), Expect = 3.1
 Identities = 18/43 (41%), Positives = 24/43 (55%)
 Frame = -3

Query: 701 EKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT*AS 573
           EKG +VSGKR+GRN  A   ++      +  +C  SP  T AS
Sbjct: 3   EKGPEVSGKRRGRNNAAASASAAAASAAASAAC-ASPAATAAS 44


>AF137396-7|AAG41681.1|  326|Homo sapiens HOR5'Beta7 protein.
          Length = 326

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 15/29 (51%), Positives = 18/29 (62%)
 Frame = +3

Query: 645 LVRSPVPTLPLTGYLSAFLPSGSVALSHS 731
           + R PV T+P+   L AF   GSV LSHS
Sbjct: 161 IFRGPVATIPIVLLLKAFPYCGSVVLSHS 189


>AK123478-1|BAC85623.1|  124|Homo sapiens protein ( Homo sapiens
           cDNA FLJ41484 fis, clone BRTHA2003030. ).
          Length = 124

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 16/50 (32%), Positives = 24/50 (48%)
 Frame = +1

Query: 547 PPXTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPP 696
           P   ++++  A + G  + Q  K  R+ PL+AP       P  LPD  PP
Sbjct: 74  PEGWTVSRCPANICGISSTQQGKRWRQKPLQAPEGTHFPDPVHLPDPRPP 123


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,793,086
Number of Sequences: 237096
Number of extensions: 2858042
Number of successful extensions: 12091
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12088
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11048563978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)