Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_L24
(988 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 37 0.019
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 37 0.019
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 37 0.019
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 36 0.044
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 0.96
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 0.96
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 0.96
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 30 2.9
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 29 3.9
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 29 5.1
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 29 5.1
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 6.7
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 28 8.9
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 28 8.9
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 37.1 bits (82), Expect = 0.019
Identities = 31/127 (24%), Positives = 34/127 (26%), Gaps = 1/127 (0%)
Frame = -3
Query: 581 FXGKPXXPPWGGGXXXPPPKARXXXXXXXXXGXGXXXXTPXPXGGGGFXXXXK-XXXPPP 405
F GK PP G PPPK +P P G PPP
Sbjct: 225 FRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 284
Query: 404 GXGKKKXXXGGGXXXFXXXKGGPKXPRXPXFXQKXXFFPXXXGGGGPXPPRXFXXXGPXX 225
G G +G P P + P G G P PP P
Sbjct: 285 AGGSPPPPRAGSPPPPPPPRGSPPTGSLP--PPQAGGSPPPAGTGSPPPPPRQKRQAPER 342
Query: 224 PPQRGXP 204
P G P
Sbjct: 343 SPPTGSP 349
Score = 31.1 bits (67), Expect = 1.3
Identities = 28/98 (28%), Positives = 29/98 (29%), Gaps = 2/98 (2%)
Frame = +3
Query: 195 PGPGXPPLGGXXGPPXXKXPWGXWAPPPXXGGEKXXFLGKXGXPWXFWAPFXXXKXXXPP 374
P G PPL G PP P PPP G G P +P PP
Sbjct: 242 PPKGSPPLAGSGSPP--PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 299
Query: 375 PXXXFFFSRXXGGXGXFXPXXK--XPPPXGXGGXXXGP 482
P R G P PPP G G P
Sbjct: 300 PPP----PRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 333
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 37.1 bits (82), Expect = 0.019
Identities = 31/127 (24%), Positives = 34/127 (26%), Gaps = 1/127 (0%)
Frame = -3
Query: 581 FXGKPXXPPWGGGXXXPPPKARXXXXXXXXXGXGXXXXTPXPXGGGGFXXXXK-XXXPPP 405
F GK PP G PPPK +P P G PPP
Sbjct: 246 FRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 305
Query: 404 GXGKKKXXXGGGXXXFXXXKGGPKXPRXPXFXQKXXFFPXXXGGGGPXPPRXFXXXGPXX 225
G G +G P P + P G G P PP P
Sbjct: 306 AGGSPPPPRAGSPPPPPPPRGSPPTGSLP--PPQAGGSPPPAGTGSPPPPPRQKRQAPER 363
Query: 224 PPQRGXP 204
P G P
Sbjct: 364 SPPTGSP 370
Score = 31.1 bits (67), Expect = 1.3
Identities = 28/98 (28%), Positives = 29/98 (29%), Gaps = 2/98 (2%)
Frame = +3
Query: 195 PGPGXPPLGGXXGPPXXKXPWGXWAPPPXXGGEKXXFLGKXGXPWXFWAPFXXXKXXXPP 374
P G PPL G PP P PPP G G P +P PP
Sbjct: 263 PPKGSPPLAGSGSPP--PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 320
Query: 375 PXXXFFFSRXXGGXGXFXPXXK--XPPPXGXGGXXXGP 482
P R G P PPP G G P
Sbjct: 321 PPP----PRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 354
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 37.1 bits (82), Expect = 0.019
Identities = 31/127 (24%), Positives = 34/127 (26%), Gaps = 1/127 (0%)
Frame = -3
Query: 581 FXGKPXXPPWGGGXXXPPPKARXXXXXXXXXGXGXXXXTPXPXGGGGFXXXXK-XXXPPP 405
F GK PP G PPPK +P P G PPP
Sbjct: 231 FRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 290
Query: 404 GXGKKKXXXGGGXXXFXXXKGGPKXPRXPXFXQKXXFFPXXXGGGGPXPPRXFXXXGPXX 225
G G +G P P + P G G P PP P
Sbjct: 291 AGGSPPPPRAGSPPPPPPPRGSPPTGSLP--PPQAGGSPPPAGTGSPPPPPRQKRQAPER 348
Query: 224 PPQRGXP 204
P G P
Sbjct: 349 SPPTGSP 355
Score = 31.1 bits (67), Expect = 1.3
Identities = 28/98 (28%), Positives = 29/98 (29%), Gaps = 2/98 (2%)
Frame = +3
Query: 195 PGPGXPPLGGXXGPPXXKXPWGXWAPPPXXGGEKXXFLGKXGXPWXFWAPFXXXKXXXPP 374
P G PPL G PP P PPP G G P +P PP
Sbjct: 248 PPKGSPPLAGSGSPP--PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 305
Query: 375 PXXXFFFSRXXGGXGXFXPXXK--XPPPXGXGGXXXGP 482
P R G P PPP G G P
Sbjct: 306 PPP----PRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 339
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 35.9 bits (79), Expect = 0.044
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = +1
Query: 256 GGXGPPPPXXXGKKXXFWXNXGXLGFFGPPXXXXKXIXPPPXXXF 390
GG GPPPP G + G G FGPP PP F
Sbjct: 407 GGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGF 451
Score = 30.7 bits (66), Expect = 1.7
Identities = 25/89 (28%), Positives = 27/89 (30%), Gaps = 1/89 (1%)
Frame = +3
Query: 195 PGPGXPPLGGXXGPPXXKXPWGXWAPPPXXGGEKXXFLGKXG-XPWXFWAPFXXXKXXXP 371
P P G PP P G +APPP G G G P P P
Sbjct: 367 PPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPP 426
Query: 372 PPXXXFFFSRXXGGXGXFXPXXKXPPPXG 458
F GG G + P PP G
Sbjct: 427 QGGPGGFGPPPPGGPGAYGPPPTGFPPVG 455
Score = 30.3 bits (65), Expect = 2.2
Identities = 18/62 (29%), Positives = 18/62 (29%)
Frame = -3
Query: 587 PRFXGKPXXPPWGGGXXXPPPKARXXXXXXXXXGXGXXXXTPXPXGGGGFXXXXKXXXPP 408
P G P P GG PPP G P P GG G PP
Sbjct: 394 PSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPP 453
Query: 407 PG 402
G
Sbjct: 454 VG 455
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.5 bits (68), Expect = 0.96
Identities = 24/84 (28%), Positives = 26/84 (30%), Gaps = 1/84 (1%)
Frame = +1
Query: 211 PLWGGXXGPXXXKXLGGXGPPPPXXXGKKXXFWXNXGXLGFFG-PPXXXXKXIXPPPXXX 387
P+ GG P + G PPPP G G PP PPP
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Query: 388 FFFPXPGGGXXXFXXXKXPPPPXG 459
P P F PPPP G
Sbjct: 768 CPPPPPPPPPGGFKGGPPPPPPPG 791
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.5 bits (68), Expect = 0.96
Identities = 24/84 (28%), Positives = 26/84 (30%), Gaps = 1/84 (1%)
Frame = +1
Query: 211 PLWGGXXGPXXXKXLGGXGPPPPXXXGKKXXFWXNXGXLGFFG-PPXXXXKXIXPPPXXX 387
P+ GG P + G PPPP G G PP PPP
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Query: 388 FFFPXPGGGXXXFXXXKXPPPPXG 459
P P F PPPP G
Sbjct: 768 CPPPPPPPPPGGFKGGPPPPPPPG 791
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.5 bits (68), Expect = 0.96
Identities = 24/84 (28%), Positives = 26/84 (30%), Gaps = 1/84 (1%)
Frame = +1
Query: 211 PLWGGXXGPXXXKXLGGXGPPPPXXXGKKXXFWXNXGXLGFFG-PPXXXXKXIXPPPXXX 387
P+ GG P + G PPPP G G PP PPP
Sbjct: 291 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 350
Query: 388 FFFPXPGGGXXXFXXXKXPPPPXG 459
P P F PPPP G
Sbjct: 351 CPPPPPPPPPGGFKGGPPPPPPPG 374
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 29.9 bits (64), Expect = 2.9
Identities = 20/69 (28%), Positives = 22/69 (31%)
Frame = +1
Query: 259 GXGPPPPXXXGKKXXFWXNXGXLGFFGPPXXXXKXIXPPPXXXFFFPXPGGGXXXFXXXK 438
G G PPP G+ G PP PPP G G +
Sbjct: 70 GTGTPPPPPTGEPQDLSAEEGNASRRPPPPPKGTGTPPPPPTGEPQDLSGEGN---ASRR 126
Query: 439 XPPPPXGXG 465
PPPP G G
Sbjct: 127 PPPPPKGTG 135
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 29.5 bits (63), Expect = 3.9
Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +3
Query: 195 PGP-GXPPLGGXXGPPXXKXPWGXWAPPPXXGGEKXXFLGKXGXPWXFWAP 344
PGP G P + G GPP + P G A P G + +G G P AP
Sbjct: 143 PGPPGQPGIPGDNGPPGEQGPKGPDAAPGEPGPKGP--IGPPGPPGQAGAP 191
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 29.1 bits (62), Expect = 5.1
Identities = 30/114 (26%), Positives = 34/114 (29%), Gaps = 1/114 (0%)
Frame = -3
Query: 656 PGPFXGXXALWGPXGXKXFSXGXPRFXGKPXXPPWGGGXXXPPPKARXXXXXXXXXGXGX 477
PG + P G F G P G P PP G P+ G
Sbjct: 106 PGGVPPQAQPFNPHGGSMF--GGP---GGPGGPPPFGQPFQQAPQGMFNVPTGPPPLMGG 160
Query: 476 XXXTPXPXGGGGFXXXXKXXXPPPGXGKKKXXXG-GGXXXFXXXKGGPKXPRXP 318
P GG G PPG G + G GG +GGP P P
Sbjct: 161 GGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGP 214
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 29.1 bits (62), Expect = 5.1
Identities = 30/114 (26%), Positives = 34/114 (29%), Gaps = 1/114 (0%)
Frame = -3
Query: 656 PGPFXGXXALWGPXGXKXFSXGXPRFXGKPXXPPWGGGXXXPPPKARXXXXXXXXXGXGX 477
PG + P G F G P G P PP G P+ G
Sbjct: 386 PGGVPPQAQPFNPHGGSMF--GGP---GGPGGPPPFGQPFQQAPQGMFNVPTGPPPLMGG 440
Query: 476 XXXTPXPXGGGGFXXXXKXXXPPPGXGKKKXXXG-GGXXXFXXXKGGPKXPRXP 318
P GG G PPG G + G GG +GGP P P
Sbjct: 441 GGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGP 494
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 28.7 bits (61), Expect = 6.7
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = +1
Query: 319 GXLGFFGPPXXXXKXIXPPPXXXFFFPXPGGGXXXFXXXKXPPPPXGXGV 468
G G PP I PPP P P F PPPP G GV
Sbjct: 79 GPGGIPPPPPMFAGGIPPPPPMMGGIPPP---PPMFGAPPPPPPPSGLGV 125
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 28.3 bits (60), Expect = 8.9
Identities = 20/60 (33%), Positives = 21/60 (35%)
Frame = -3
Query: 374 GGXXXFXXXKGGPKXPRXPXFXQKXXFFPXXXGGGGPXPPRXFXXXGPXXPPQRGXPRPR 195
GG +GGP P P GGGG PP GP PP P PR
Sbjct: 775 GGRQAPMPPRGGPGAPPPPGMRPPPG---APGGGGGMYPPLIPTRPGPGGPPPNMAP-PR 830
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 28.3 bits (60), Expect = 8.9
Identities = 20/60 (33%), Positives = 21/60 (35%)
Frame = -3
Query: 374 GGXXXFXXXKGGPKXPRXPXFXQKXXFFPXXXGGGGPXPPRXFXXXGPXXPPQRGXPRPR 195
GG +GGP P P GGGG PP GP PP P PR
Sbjct: 775 GGRQAPMPPRGGPGAPPPPGMRPPPG---APGGGGGMYPPLIPTRPGPGGPPPNMAP-PR 830
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,875,512
Number of Sequences: 27780
Number of extensions: 304378
Number of successful extensions: 1559
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1391
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2573710548
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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