Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_L23
         (892 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC110616-1|AAI10617.1|  679|Homo sapiens asteroid homolog 1 (Dro...   123   8e-28
AK027806-1|BAB55383.1|  626|Homo sapiens protein ( Homo sapiens ...   123   8e-28
BC103709-1|AAI03710.1|  540|Homo sapiens ASTE1 protein protein.        37   0.085

>BC110616-1|AAI10617.1|  679|Homo sapiens asteroid homolog 1
           (Drosophila) protein.
          Length = 679

 Score =  123 bits (297), Expect = 8e-28
 Identities = 70/178 (39%), Positives = 99/178 (55%), Gaps = 4/178 (2%)
 Frame = +1

Query: 190 GVRGLTTYINKNEDIFLKDFVLYDSCVVIDGHSLCAQLYQRLNSFSAFGGDYDKFFQYVR 369
           G+RGL +++  + + F  D  L D+ +VIDG++L  +L    N    +GGDYD F   V+
Sbjct: 2   GIRGLMSFVEDHSNEFFTDLKLRDTKIVIDGYALFHRLCFSSNLDLRYGGDYDSFADVVQ 61

Query: 370 TFFKHFRKCNLTSYVLFDGSYE--TRKLKTAYHRLRSKIYGASCLDPVTQGCMQIFPLLI 543
            FF+    CN+  YV+ DG  +   +KL T   R R KI  A  L     G   + PLLI
Sbjct: 62  KFFESLFACNICPYVVLDGGCDISDKKLTTLKDRAREKIQMAHSLS--VGGSGYVCPLLI 119

Query: 544 RNVFKEALIDIGVAYTVCEFEADDEIAAMARHLNCPVLSYDSDFYIYNVL--YIPFNT 711
           R VF + LI + V +  C  EAD +I  +A H NCPVLS DSDF I+++   + P N+
Sbjct: 120 REVFIQVLIKLRVCFVQCFSEADRDIMTLANHWNCPVLSSDSDFCIFDLKTGFCPLNS 177


>AK027806-1|BAB55383.1|  626|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14900 fis, clone PLACE1005176, highly similar to
           Homo sapiens hypothalamus protein HT001 mRNA. ).
          Length = 626

 Score =  123 bits (297), Expect = 8e-28
 Identities = 70/178 (39%), Positives = 99/178 (55%), Gaps = 4/178 (2%)
 Frame = +1

Query: 190 GVRGLTTYINKNEDIFLKDFVLYDSCVVIDGHSLCAQLYQRLNSFSAFGGDYDKFFQYVR 369
           G+RGL +++  + + F  D  L D+ +VIDG++L  +L    N    +GGDYD F   V+
Sbjct: 2   GIRGLMSFVEDHSNEFFTDLKLRDTKIVIDGYALFHRLCFSSNLDLRYGGDYDSFADVVQ 61

Query: 370 TFFKHFRKCNLTSYVLFDGSYE--TRKLKTAYHRLRSKIYGASCLDPVTQGCMQIFPLLI 543
            FF+    CN+  YV+ DG  +   +KL T   R R KI  A  L     G   + PLLI
Sbjct: 62  KFFESLFACNICPYVVLDGGCDISDKKLTTLKDRAREKIQMAHSLS--VGGSGYVCPLLI 119

Query: 544 RNVFKEALIDIGVAYTVCEFEADDEIAAMARHLNCPVLSYDSDFYIYNVL--YIPFNT 711
           R VF + LI + V +  C  EAD +I  +A H NCPVLS DSDF I+++   + P N+
Sbjct: 120 REVFIQVLIKLRVCFVQCFSEADRDIMTLANHWNCPVLSSDSDFCIFDLKTGFCPLNS 177


>BC103709-1|AAI03710.1|  540|Homo sapiens ASTE1 protein protein.
          Length = 540

 Score = 37.1 bits (82), Expect = 0.085
 Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
 Frame = +1

Query: 607 ADDEIAAMARHLNCPVLSYDSDFYIYNVL--YIPFNT 711
           A  +I  +A H NCPVLS DSDF I+++   + P N+
Sbjct: 2   ASGDIMTLANHWNCPVLSSDSDFCIFDLKTGFCPLNS 38


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,335,298
Number of Sequences: 237096
Number of extensions: 1947482
Number of successful extensions: 3173
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3049
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3171
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)