Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_L22
         (926 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0924 - 32749682-32750200,32750756-32750959,32751062-327511...    29   4.0  
04_04_1263 - 32207636-32207938,32208020-32208170,32208263-322085...    29   5.2  
12_01_0825 - 7611594-7611728,7612061-7612276,7612505-7612589,761...    28   9.2  
05_01_0356 + 2785410-2785670,2785843-2785960,2786800-2786891,278...    28   9.2  

>02_05_0924 -
           32749682-32750200,32750756-32750959,32751062-32751109,
           32751769-32751819,32751907-32752032,32752117-32752257,
           32752750-32752971,32753160-32753312,32753536-32753718,
           32753964-32754110,32754212-32754319,32754426-32754530,
           32754824-32754928,32755243-32755310,32755498-32755576,
           32755876-32755935,32756023-32756076,32756168-32756233,
           32756701-32756753,32757042-32757096,32757645-32757787,
           32758236-32758333,32758436-32758716
          Length = 1022

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 17/45 (37%), Positives = 22/45 (48%)
 Frame = +2

Query: 194 WLV*RKAAGTIAVPTSSSRDKLSVTTGTKFVTLNKENRNLADQPR 328
           W   RK  G  ++ TSS  DK S+T  T   T   E+ N   +PR
Sbjct: 582 WFKLRKREGGASILTSSEGDKSSLTKSTAPSTPIGESVNFPSEPR 626


>04_04_1263 - 32207636-32207938,32208020-32208170,32208263-32208500,
            32208604-32208814,32208927-32209108,32209196-32209297,
            32210002-32211187,32212103-32212499,32212551-32212582,
            32212885-32213157,32213307-32213394,32213486-32213723,
            32213824-32214034,32214119-32214300,32214378-32214479,
            32214801-32216224,32216751-32216822,32217688-32217719,
            32218186-32218263,32218425-32218512,32218608-32218845,
            32219060-32219162,32219386-32219558,32219644-32219745,
            32219825-32220606,32220659-32221012,32224055-32224140,
            32224250-32224400,32224534-32224771,32224876-32225119,
            32225190-32225368,32225577-32225675,32225835-32227083
          Length = 3195

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
 Frame = +3

Query: 105  NXKTQ*WQIIIPRPKGXGMMCQPQPXGNPAGWCDARQQ-ERSPCL 236
            N     W +++ RP    ++C P     P G+CDA     R  CL
Sbjct: 1748 NDSASSWTVVVQRPSPT-IVCDPYASCGPFGYCDATAAIPRCQCL 1791


>12_01_0825 -
           7611594-7611728,7612061-7612276,7612505-7612589,
           7613170-7613372,7613935-7615723,7616322-7616450,
           7616825-7616928,7618725-7618779,7618860-7618975
          Length = 943

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
 Frame = +2

Query: 68  PXKVVYKQYLICKXQDPVMANNNTQAQGLXNDVSTTTAWQSRWLV*RKAAGTIAV-PTSS 244
           P +++ ++   C   D    N      G+   + + +AW+S W V  +  G+  V P + 
Sbjct: 778 PAELIVEKSSACINVDYEYVNILADTPGIKRGLESPSAWKSPWFVDMQFQGSYFVSPANG 837

Query: 245 SRDKLSV 265
           S D L +
Sbjct: 838 SYDALGL 844


>05_01_0356 +
           2785410-2785670,2785843-2785960,2786800-2786891,
           2787114-2787176,2787299-2787397,2787726-2787884,
           2788420-2788491,2788567-2788699,2788813-2788877,
           2789016-2789091,2789236-2789337,2789524-2789716,
           2790576-2790654,2792939-2793007,2793261-2793311,
           2793680-2793742,2793926-2794041,2794263-2794347,
           2794898-2794957,2795594-2795639,2796011-2796084,
           2796350-2796400,2796474-2796674,2796747-2796791,
           2797063-2797156,2797226-2797371,2797510-2797739,
           2798136-2798196,2798290-2798347,2799020-2799513
          Length = 1151

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
 Frame = -2

Query: 316 REVSVLFVQSHELGSSRHGELVSAGT--RRHGDRSCCLASHQPAG 188
           +E S++F Q+   G    G+ + A     R+ +  CC+ASH   G
Sbjct: 624 KEFSLIFSQAPNRGGKAPGDSLDAQRWWNRYVEAQCCIASHDYKG 668


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,876,735
Number of Sequences: 37544
Number of extensions: 298391
Number of successful extensions: 727
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 727
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2647531240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)