Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_L20
(838 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X91509-1|CAA62809.1| 103|Apis mellifera histone H4 protein. 143 2e-36
AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein. 24 2.0
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 23 3.5
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 23 3.5
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 23 3.5
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 23 3.5
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 23 3.5
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 23 3.5
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 23 3.5
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 23 3.5
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 23 3.5
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 23 3.5
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 23 4.6
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 23 4.6
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 23 4.6
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 23 4.6
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 22 8.1
>X91509-1|CAA62809.1| 103|Apis mellifera histone H4 protein.
Length = 103
Score = 143 bits (346), Expect = 2e-36
Identities = 71/74 (95%), Positives = 71/74 (95%)
Frame = +1
Query: 202 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKT 381
VL DNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEH KRKT
Sbjct: 22 VLGDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHTKRKT 81
Query: 382 VTAMDVVYALKRQG 423
VTAMDVVYALK QG
Sbjct: 82 VTAMDVVYALKIQG 95
>AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein.
Length = 388
Score = 23.8 bits (49), Expect = 2.0
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +3
Query: 243 PSFGSQRWSETYLRSYIRRDPRRSQSVPRKRDPRRCHIHRTRQEED 380
PS + W+E +L + +R DP + ++ + + + H TRQ ED
Sbjct: 22 PSVMLKIWTEEFLSTILRLDP-KFIALHCQEVGGKNYEHSTRQVED 66
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 23.0 bits (47), Expect = 3.5
Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = -2
Query: 411 QSVHNIHSGDGLPLGVFGVCDSVADHV--FEEHFENAAGLFVYKTGDT 274
Q +H++H+ + + V DS +HV + + N G V GD+
Sbjct: 324 QMIHDLHTRISTAIDLGYVVDSYGNHVKLYTKQGLNVLGNIVQGNGDS 371
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 3.5
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 711 FNNNQTXXRHLRLIYNIN 658
+NNN + +L YNIN
Sbjct: 97 YNNNNNYNNYKKLYYNIN 114
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 23.0 bits (47), Expect = 3.5
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 711 FNNNQTXXRHLRLIYNIN 658
+NNN + +L YNIN
Sbjct: 97 YNNNNNYNNYKKLYYNIN 114
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 3.5
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 711 FNNNQTXXRHLRLIYNIN 658
+NNN + +L YNIN
Sbjct: 97 YNNNNNYNNYKKLYYNIN 114
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 3.5
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 711 FNNNQTXXRHLRLIYNIN 658
+NNN + +L YNIN
Sbjct: 97 YNNNNNYNNYKKLYYNIN 114
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 3.5
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 711 FNNNQTXXRHLRLIYNIN 658
+NNN + +L YNIN
Sbjct: 97 YNNNNNYNNYKKLYYNIN 114
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 3.5
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 711 FNNNQTXXRHLRLIYNIN 658
+NNN + +L YNIN
Sbjct: 97 YNNNNNYNNYKKLYYNIN 114
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 3.5
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 711 FNNNQTXXRHLRLIYNIN 658
+NNN + +L YNIN
Sbjct: 97 YNNNNNYNNYKKLYYNIN 114
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 3.5
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 711 FNNNQTXXRHLRLIYNIN 658
+NNN + +L YNIN
Sbjct: 97 YNNNNNYNNYKKLYYNIN 114
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 23.0 bits (47), Expect = 3.5
Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = -2
Query: 411 QSVHNIHSGDGLPLGVFGVCDSVADHV--FEEHFENAAGLFVYKTGDT 274
Q +H++H+ + + V DS +HV + + N G V GD+
Sbjct: 324 QMIHDLHTRISTAIDLGYVVDSYGNHVKLYTKQGLNVLGNIVQGNGDS 371
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 22.6 bits (46), Expect = 4.6
Identities = 13/43 (30%), Positives = 18/43 (41%)
Frame = -2
Query: 231 RDALDVITQHLPVTFSAPLSKTFASFTATGHLDELLGLCFVLV 103
R AL V T T + + + +D LG CFV+V
Sbjct: 252 RVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMV 294
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 22.6 bits (46), Expect = 4.6
Identities = 13/43 (30%), Positives = 18/43 (41%)
Frame = -2
Query: 231 RDALDVITQHLPVTFSAPLSKTFASFTATGHLDELLGLCFVLV 103
R AL V T T + + + +D LG CFV+V
Sbjct: 252 RVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMV 294
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 22.6 bits (46), Expect = 4.6
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -2
Query: 405 VHNIHSGDGLPLGVFG 358
VHN+H G+ G+FG
Sbjct: 331 VHNLHGMPGILGGIFG 346
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 22.6 bits (46), Expect = 4.6
Identities = 13/43 (30%), Positives = 18/43 (41%)
Frame = -2
Query: 231 RDALDVITQHLPVTFSAPLSKTFASFTATGHLDELLGLCFVLV 103
R AL V T T + + + +D LG CFV+V
Sbjct: 191 RVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMV 233
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.8 bits (44), Expect = 8.1
Identities = 8/28 (28%), Positives = 19/28 (67%)
Frame = -3
Query: 329 SRNTLRTPRVSSYIRPEIRFTPPLRAKR 246
+++ ++T ++ + PE++ TP +AKR
Sbjct: 387 NQDVVQTHVLTIHTIPEVKVTPRFQAKR 414
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,591
Number of Sequences: 438
Number of extensions: 2690
Number of successful extensions: 24
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26824317
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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