Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_L19
         (878 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29378-5|AAA68725.2|  355|Caenorhabditis elegans Hypothetical pr...   109   3e-24
U40061-5|AAY43979.1|  312|Caenorhabditis elegans Hypothetical pr...    83   3e-16
Z81498-2|CAB04085.1|  760|Caenorhabditis elegans Hypothetical pr...    30   2.5  
Z81498-1|CAB04086.1|  692|Caenorhabditis elegans Hypothetical pr...    30   2.5  
U12682-1|AAB63525.1|  692|Caenorhabditis elegans celfurPC protei...    30   2.5  

>U29378-5|AAA68725.2|  355|Caenorhabditis elegans Hypothetical
           protein F08C6.6 protein.
          Length = 355

 Score =  109 bits (261), Expect = 3e-24
 Identities = 50/134 (37%), Positives = 81/134 (60%)
 Frame = +1

Query: 295 FRIGIVADLDTNSKSSTKAYSFHSYLKKGHLVYNRVKNSVTVTWDSQQPTLLTSMYSHKG 474
           + I ++ DLD +SK   K   + S + +G L  +       + +D      + +  +  G
Sbjct: 57  YSIMLITDLDHDSKDGKK---WKSLVSRGFLKVSADHKHADIHFDKDSEYYVDTNIAAGG 113

Query: 475 RGMELSELIVYDGRLLTFDDRSGMVFEIISNKMVPWLVLTDGNGHVEKGFKSEWAAMKDE 654
           R MELS+L V++G+L + DDR+G++++I   K +PW++L DG G+V KGFK EW  +KD 
Sbjct: 114 RAMELSDLAVFNGKLYSIDDRTGLIYQISDKKALPWVLLNDGPGNVVKGFKGEWITVKDT 173

Query: 655 ILYIGSMGKEWTTS 696
            L +G +GKEWTT+
Sbjct: 174 ELIVGGLGKEWTTT 187



 Score = 33.9 bits (74), Expect = 0.15
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +2

Query: 701 GEFENYDPMWVKAVNINGXVQHLTWVNQYKAIXAXSG 811
           G + N  PMWVK V+ +G V H  W + Y  +   +G
Sbjct: 189 GVYVNDHPMWVKHVSAHGAVHHENWKDVYIRVRRAAG 225


>U40061-5|AAY43979.1|  312|Caenorhabditis elegans Hypothetical
           protein ZK563.7 protein.
          Length = 312

 Score = 82.6 bits (195), Expect = 3e-16
 Identities = 39/131 (29%), Positives = 76/131 (58%)
 Frame = +1

Query: 301 IGIVADLDTNSKSSTKAYSFHSYLKKGHLVYNRVKNSVTVTWDSQQPTLLTSMYSHKGRG 480
           + I+ D+D+ +K      S++S L+ G L +++ + +  + W       +TS ++   + 
Sbjct: 5   LAIITDMDSKTKQKD---SWYSTLRYGALAFSQNRTASFIHWLGG--VNITSNFNFNQKS 59

Query: 481 MELSELIVYDGRLLTFDDRSGMVFEIISNKMVPWLVLTDGNGHVEKGFKSEWAAMKDEIL 660
           ME+S+L +++ RLL+ DD+ G+V+ + +   +PW++ + GNG     FK EW  +++  L
Sbjct: 60  MEMSDLKIFNNRLLSVDDKIGVVYWLRNGTAIPWVISSTGNGSSSSPFKGEWMTIRNNKL 119

Query: 661 YIGSMGKEWTT 693
           Y+GS G E  T
Sbjct: 120 YLGSSGHELRT 130


>Z81498-2|CAB04085.1|  760|Caenorhabditis elegans Hypothetical
           protein F11A6.1b protein.
          Length = 760

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = -1

Query: 575 TILLDIISKTMPDRSSNVSSLPS*TISSDNSIPRPLCEYMDVNKVG 438
           TIL D + +T PD S N     S  ++  ++ P P  E+ D N+ G
Sbjct: 218 TILDDGLERTHPDISPNYDERASYDVNDRDNDPMPRYEFSDENRHG 263


>Z81498-1|CAB04086.1|  692|Caenorhabditis elegans Hypothetical
           protein F11A6.1a protein.
          Length = 692

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = -1

Query: 575 TILLDIISKTMPDRSSNVSSLPS*TISSDNSIPRPLCEYMDVNKVG 438
           TIL D + +T PD S N     S  ++  ++ P P  E+ D N+ G
Sbjct: 218 TILDDGLERTHPDISPNYDERASYDVNDRDNDPMPRYEFSDENRHG 263


>U12682-1|AAB63525.1|  692|Caenorhabditis elegans celfurPC protein
           protein.
          Length = 692

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = -1

Query: 575 TILLDIISKTMPDRSSNVSSLPS*TISSDNSIPRPLCEYMDVNKVG 438
           TIL D + +T PD S N     S  ++  ++ P P  E+ D N+ G
Sbjct: 218 TILDDGLERTHPDISPNYDERASYDVNDRDNDPMPRYEFSDENRHG 263


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,908,263
Number of Sequences: 27780
Number of extensions: 392881
Number of successful extensions: 903
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 877
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 903
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)