Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_L17
(915 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC130532-1|AAI30533.1| 1035|Homo sapiens TDRD5 protein protein. 43 0.002
AL590987-2|CAH73724.1| 981|Homo sapiens tudor domain containing... 43 0.002
AL160286-6|CAI15400.1| 981|Homo sapiens tudor domain containing... 43 0.002
AK127370-1|BAC86946.1| 981|Homo sapiens protein ( Homo sapiens ... 43 0.002
BC028369-1|AAH28369.1| 617|Homo sapiens fem-1 homolog c (C. ele... 31 5.8
AY249188-1|AAO64429.1| 617|Homo sapiens FEM1C protein. 31 5.8
AL365415-1|CAB96957.1| 271|Homo sapiens similar to (NP_034322.1... 31 5.8
AF391093-1|AAL37627.1| 617|Homo sapiens FEM1A protein. 31 5.8
AB058688-1|BAB47414.1| 617|Homo sapiens KIAA1785 protein protein. 31 5.8
>BC130532-1|AAI30533.1| 1035|Homo sapiens TDRD5 protein protein.
Length = 1035
Score = 42.7 bits (96), Expect = 0.002
Identities = 23/91 (25%), Positives = 45/91 (49%)
Frame = +3
Query: 240 LKGVLRSLVVSSPTQVDLRSLLRDYRSMMGEHIPIAKYGYRDLLTFLKERCSDCFLFGGV 419
L+ +RSL++S+ + + L ++Y M+G H+P+ GYR + + + + G
Sbjct: 11 LRKEIRSLLISTKDGLSPQELEKEYLLMVGNHLPLRILGYRSTMELVLDMPDVVRVCPGA 70
Query: 420 SSNPVLTLIVPDNLKHIDKFVRKQKAPTNVR 512
+L I ++ K I V KQ++ +R
Sbjct: 71 GGTVILKAIPDESTKGIASLVAKQRSSHKLR 101
>AL590987-2|CAH73724.1| 981|Homo sapiens tudor domain containing 5
protein.
Length = 981
Score = 42.7 bits (96), Expect = 0.002
Identities = 23/91 (25%), Positives = 45/91 (49%)
Frame = +3
Query: 240 LKGVLRSLVVSSPTQVDLRSLLRDYRSMMGEHIPIAKYGYRDLLTFLKERCSDCFLFGGV 419
L+ +RSL++S+ + + L ++Y M+G H+P+ GYR + + + + G
Sbjct: 11 LRKEIRSLLISTKDGLSPQELEKEYLLMVGNHLPLRILGYRSTMELVLDMPDVVRVCPGA 70
Query: 420 SSNPVLTLIVPDNLKHIDKFVRKQKAPTNVR 512
+L I ++ K I V KQ++ +R
Sbjct: 71 GGTVILKAIPDESTKGIASLVAKQRSSHKLR 101
>AL160286-6|CAI15400.1| 981|Homo sapiens tudor domain containing 5
protein.
Length = 981
Score = 42.7 bits (96), Expect = 0.002
Identities = 23/91 (25%), Positives = 45/91 (49%)
Frame = +3
Query: 240 LKGVLRSLVVSSPTQVDLRSLLRDYRSMMGEHIPIAKYGYRDLLTFLKERCSDCFLFGGV 419
L+ +RSL++S+ + + L ++Y M+G H+P+ GYR + + + + G
Sbjct: 11 LRKEIRSLLISTKDGLSPQELEKEYLLMVGNHLPLRILGYRSTMELVLDMPDVVRVCPGA 70
Query: 420 SSNPVLTLIVPDNLKHIDKFVRKQKAPTNVR 512
+L I ++ K I V KQ++ +R
Sbjct: 71 GGTVILKAIPDESTKGIASLVAKQRSSHKLR 101
>AK127370-1|BAC86946.1| 981|Homo sapiens protein ( Homo sapiens
cDNA FLJ45446 fis, clone BRSSN2015497. ).
Length = 981
Score = 42.7 bits (96), Expect = 0.002
Identities = 23/91 (25%), Positives = 45/91 (49%)
Frame = +3
Query: 240 LKGVLRSLVVSSPTQVDLRSLLRDYRSMMGEHIPIAKYGYRDLLTFLKERCSDCFLFGGV 419
L+ +RSL++S+ + + L ++Y M+G H+P+ GYR + + + + G
Sbjct: 11 LRKEIRSLLISTKDGLSPQELEKEYLLMVGNHLPLRILGYRSTMELVLDMPDVVRVCPGA 70
Query: 420 SSNPVLTLIVPDNLKHIDKFVRKQKAPTNVR 512
+L I ++ K I V KQ++ +R
Sbjct: 71 GGTVILKAIPDESTKGIASLVAKQRSSHKLR 101
>BC028369-1|AAH28369.1| 617|Homo sapiens fem-1 homolog c (C.
elegans) protein.
Length = 617
Score = 31.1 bits (67), Expect = 5.8
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = +3
Query: 246 GVLRSL--VVSSPTQVDLRSLLRDYRSMMGEHIPIAKYGYRDLLTFLKERCSDCFLFGG 416
G LR L +++S ++ ++ SL+ + + + A+YG+ D++ FL E+CS GG
Sbjct: 14 GKLRLLTKLLASKSKEEVSSLISEKTNGATPLLMAARYGHLDMVEFLLEQCSASIEVGG 72
>AY249188-1|AAO64429.1| 617|Homo sapiens FEM1C protein.
Length = 617
Score = 31.1 bits (67), Expect = 5.8
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = +3
Query: 246 GVLRSL--VVSSPTQVDLRSLLRDYRSMMGEHIPIAKYGYRDLLTFLKERCSDCFLFGG 416
G LR L +++S ++ ++ SL+ + + + A+YG+ D++ FL E+CS GG
Sbjct: 14 GKLRLLTKLLASKSKEEVSSLISEKTNGATPLLMAARYGHLDMVEFLLEQCSASIEVGG 72
>AL365415-1|CAB96957.1| 271|Homo sapiens similar to (NP_034322.1|)
sex-determination protein homolog Fem1a [Mus musculus
protein.
Length = 271
Score = 31.1 bits (67), Expect = 5.8
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = +3
Query: 246 GVLRSL--VVSSPTQVDLRSLLRDYRSMMGEHIPIAKYGYRDLLTFLKERCSDCFLFGG 416
G LR L +++S ++ ++ SL+ + + + A+YG+ D++ FL E+CS GG
Sbjct: 14 GKLRLLTKLLASKSKEEVSSLISEKTNGATPLLMAARYGHLDMVEFLLEQCSASIEVGG 72
>AF391093-1|AAL37627.1| 617|Homo sapiens FEM1A protein.
Length = 617
Score = 31.1 bits (67), Expect = 5.8
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = +3
Query: 246 GVLRSL--VVSSPTQVDLRSLLRDYRSMMGEHIPIAKYGYRDLLTFLKERCSDCFLFGG 416
G LR L +++S ++ ++ SL+ + + + A+YG+ D++ FL E+CS GG
Sbjct: 14 GKLRLLTKLLASKSKEEVSSLISEKTNGATPLLMAARYGHLDMVEFLLEQCSASIEVGG 72
>AB058688-1|BAB47414.1| 617|Homo sapiens KIAA1785 protein protein.
Length = 617
Score = 31.1 bits (67), Expect = 5.8
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = +3
Query: 246 GVLRSL--VVSSPTQVDLRSLLRDYRSMMGEHIPIAKYGYRDLLTFLKERCSDCFLFGG 416
G LR L +++S ++ ++ SL+ + + + A+YG+ D++ FL E+CS GG
Sbjct: 14 GKLRLLTKLLASKSKEEVSSLISEKTNGATPLLMAARYGHLDMVEFLLEQCSASIEVGG 72
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,407,408
Number of Sequences: 237096
Number of extensions: 2631136
Number of successful extensions: 5274
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5049
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5274
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11881370308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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