Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_L16
(887 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X80695-1|CAA56712.1| 435|Homo sapiens OXA1Hs protein. 124 4e-28
BC112331-1|AAI12332.1| 496|Homo sapiens oxidase (cytochrome c) ... 124 4e-28
BC001669-1|AAH01669.2| 437|Homo sapiens OXA1L protein protein. 124 4e-28
AJ001981-1|CAA05127.1| 495|Homo sapiens OXA1L protein. 124 4e-28
BC101684-1|AAI01685.1| 333|Homo sapiens COX18 cytochrome c oxid... 40 0.009
AY957565-1|AAY35061.1| 333|Homo sapiens mitochondrial COX18 pro... 40 0.009
AY957564-1|AAY35060.1| 333|Homo sapiens mitochondrial COX18 pro... 40 0.009
AK096310-1|BAC04758.1| 333|Homo sapiens protein ( Homo sapiens ... 40 0.009
>X80695-1|CAA56712.1| 435|Homo sapiens OXA1Hs protein.
Length = 435
Score = 124 bits (299), Expect = 4e-28
Identities = 53/115 (46%), Positives = 78/115 (67%)
Frame = +2
Query: 503 VPWWGAIVLGTIVVRVVMFPLVILSQRNSAQMNNNLPEIQLLQMKMTQARQTGNQIEAAR 682
+PWWGAI T+ R ++FPL++ QR +A+++N+LPEIQ ++ +A+ G+ IE +
Sbjct: 138 LPWWGAIAACTVFARCLIFPLIVTGQREAARIHNHLPEIQKFSSRIREAKLAGDHIEYYK 197
Query: 683 YAQEMMLFMKXKGLNPLKNLIVPLAQTPLFISFFMGLRGMANCPVESMTHGGLWW 847
+ EM L+ K G+ K LI+P+ Q P+FISFF+ LR MAN PV S+ GGLWW
Sbjct: 198 ASSEMALYQKKHGIKLYKPLILPVTQAPIFISFFIALREMANLPVPSLQTGGLWW 252
Score = 41.1 bits (92), Expect = 0.005
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +1
Query: 412 EPTFASIGLGGWGPVGLVQNCFEYLHVTL 498
E +FA +GLG + PVGL+QN E++HV L
Sbjct: 108 EQSFAELGLGSYTPVGLIQNLLEFMHVDL 136
>BC112331-1|AAI12332.1| 496|Homo sapiens oxidase (cytochrome c)
assembly 1-like protein.
Length = 496
Score = 124 bits (299), Expect = 4e-28
Identities = 53/115 (46%), Positives = 78/115 (67%)
Frame = +2
Query: 503 VPWWGAIVLGTIVVRVVMFPLVILSQRNSAQMNNNLPEIQLLQMKMTQARQTGNQIEAAR 682
+PWWGAI T+ R ++FPL++ QR +A+++N+LPEIQ ++ +A+ G+ IE +
Sbjct: 198 LPWWGAIAACTVFARCLIFPLIVTGQREAARIHNHLPEIQKFSSRIREAKLAGDHIEYYK 257
Query: 683 YAQEMMLFMKXKGLNPLKNLIVPLAQTPLFISFFMGLRGMANCPVESMTHGGLWW 847
+ EM L+ K G+ K LI+P+ Q P+FISFF+ LR MAN PV S+ GGLWW
Sbjct: 258 ASSEMALYQKKHGIKLYKPLILPVTQAPIFISFFIALREMANLPVPSLQTGGLWW 312
Score = 41.1 bits (92), Expect = 0.005
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +1
Query: 412 EPTFASIGLGGWGPVGLVQNCFEYLHVTL 498
E +FA +GLG + PVGL+QN E++HV L
Sbjct: 168 EQSFAELGLGSYTPVGLIQNLLEFMHVDL 196
>BC001669-1|AAH01669.2| 437|Homo sapiens OXA1L protein protein.
Length = 437
Score = 124 bits (299), Expect = 4e-28
Identities = 53/115 (46%), Positives = 78/115 (67%)
Frame = +2
Query: 503 VPWWGAIVLGTIVVRVVMFPLVILSQRNSAQMNNNLPEIQLLQMKMTQARQTGNQIEAAR 682
+PWWGAI T+ R ++FPL++ QR +A+++N+LPEIQ ++ +A+ G+ IE +
Sbjct: 140 LPWWGAIAACTVFARCLIFPLIVTGQREAARIHNHLPEIQKFSSRIREAKLAGDHIEYYK 199
Query: 683 YAQEMMLFMKXKGLNPLKNLIVPLAQTPLFISFFMGLRGMANCPVESMTHGGLWW 847
+ EM L+ K G+ K LI+P+ Q P+FISFF+ LR MAN PV S+ GGLWW
Sbjct: 200 ASSEMALYQKKHGIKLYKPLILPVTQAPIFISFFIALREMANLPVPSLQTGGLWW 254
Score = 41.1 bits (92), Expect = 0.005
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +1
Query: 412 EPTFASIGLGGWGPVGLVQNCFEYLHVTL 498
E +FA +GLG + PVGL+QN E++HV L
Sbjct: 110 EQSFAELGLGSYTPVGLIQNLLEFMHVDL 138
>AJ001981-1|CAA05127.1| 495|Homo sapiens OXA1L protein.
Length = 495
Score = 124 bits (299), Expect = 4e-28
Identities = 53/115 (46%), Positives = 78/115 (67%)
Frame = +2
Query: 503 VPWWGAIVLGTIVVRVVMFPLVILSQRNSAQMNNNLPEIQLLQMKMTQARQTGNQIEAAR 682
+PWWGAI T+ R ++FPL++ QR +A+++N+LPEIQ ++ +A+ G+ IE +
Sbjct: 198 LPWWGAIAACTVFARCLIFPLIVTGQREAARIHNHLPEIQKFSSRIREAKLAGDHIEYYK 257
Query: 683 YAQEMMLFMKXKGLNPLKNLIVPLAQTPLFISFFMGLRGMANCPVESMTHGGLWW 847
+ EM L+ K G+ K LI+P+ Q P+FISFF+ LR MAN PV S+ GGLWW
Sbjct: 258 ASSEMALYQKKHGIKLYKPLILPVTQAPIFISFFIALREMANLPVPSLQTGGLWW 312
Score = 41.1 bits (92), Expect = 0.005
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +1
Query: 412 EPTFASIGLGGWGPVGLVQNCFEYLHVTL 498
E +FA +GLG + PVGL+QN E++HV L
Sbjct: 168 EQSFAELGLGSYTPVGLIQNLLEFMHVDL 196
>BC101684-1|AAI01685.1| 333|Homo sapiens COX18 cytochrome c oxidase
assembly homolog (S. cerevisiae) protein.
Length = 333
Score = 40.3 bits (90), Expect = 0.009
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 12/113 (10%)
Frame = +2
Query: 503 VPWWGAIVLGTIVVR-VVMFPLVILSQRNSAQMNNNLPEIQLLQMKMTQ-----ARQTGN 664
+PWWG+I+L T+ +R V PL A++ N PEI+ + + Q A Q G
Sbjct: 80 LPWWGSILLSTVALRGAVTLPLAAYQHYILAKVENLQPEIKTIARHLNQEVAVRANQLGW 139
Query: 665 QIEAAR--YAQEMMLFMK----XKGLNPLKNLIVPLAQTPLFISFFMGLRGMA 805
AR Y + M + +P K ++ Q P++I LR ++
Sbjct: 140 SKRDARLTYLKNMRRLISELYVRDNCHPFKATVLVWIQLPMWIFMSFALRNLS 192
>AY957565-1|AAY35061.1| 333|Homo sapiens mitochondrial COX18
protein.
Length = 333
Score = 40.3 bits (90), Expect = 0.009
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 12/113 (10%)
Frame = +2
Query: 503 VPWWGAIVLGTIVVR-VVMFPLVILSQRNSAQMNNNLPEIQLLQMKMTQ-----ARQTGN 664
+PWWG+I+L T+ +R V PL A++ N PEI+ + + Q A Q G
Sbjct: 80 LPWWGSILLSTVALRGAVTLPLAAYQHYILAKVENLQPEIKTIARHLNQEVAVRANQLGW 139
Query: 665 QIEAAR--YAQEMMLFMK----XKGLNPLKNLIVPLAQTPLFISFFMGLRGMA 805
AR Y + M + +P K ++ Q P++I LR ++
Sbjct: 140 SKRDARLTYLKNMRRLISELYVRDNCHPFKATVLVWIQLPMWIFMSFALRNLS 192
>AY957564-1|AAY35060.1| 333|Homo sapiens mitochondrial COX18
protein.
Length = 333
Score = 40.3 bits (90), Expect = 0.009
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 12/113 (10%)
Frame = +2
Query: 503 VPWWGAIVLGTIVVR-VVMFPLVILSQRNSAQMNNNLPEIQLLQMKMTQ-----ARQTGN 664
+PWWG+I+L T+ +R V PL A++ N PEI+ + + Q A Q G
Sbjct: 80 LPWWGSILLSTVALRGAVTLPLAAYQHYILAKVENLQPEIKTIARHLNQEVAVRANQLGW 139
Query: 665 QIEAAR--YAQEMMLFMK----XKGLNPLKNLIVPLAQTPLFISFFMGLRGMA 805
AR Y + M + +P K ++ Q P++I LR ++
Sbjct: 140 SKRDARLTYLKNMRRLISELYVRDNCHPFKATVLVWIQLPMWIFMSFALRNLS 192
>AK096310-1|BAC04758.1| 333|Homo sapiens protein ( Homo sapiens
cDNA FLJ38991 fis, clone NT2RI2008622. ).
Length = 333
Score = 40.3 bits (90), Expect = 0.009
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 12/113 (10%)
Frame = +2
Query: 503 VPWWGAIVLGTIVVR-VVMFPLVILSQRNSAQMNNNLPEIQLLQMKMTQ-----ARQTGN 664
+PWWG+I+L T+ +R V PL A++ N PEI+ + + Q A Q G
Sbjct: 80 LPWWGSILLSTVALRGAVTLPLAAYQHYILAKVENLQPEIKTIARHLNQEVAVRANQLGW 139
Query: 665 QIEAAR--YAQEMMLFMK----XKGLNPLKNLIVPLAQTPLFISFFMGLRGMA 805
AR Y + M + +P K ++ Q P++I LR ++
Sbjct: 140 SKRDARLTYLKNMRRLISELYVRDNCHPFKATVLVWIQLPMWIFMSFALRNLS 192
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,692,140
Number of Sequences: 237096
Number of extensions: 2723040
Number of successful extensions: 5709
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5700
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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