Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_L11
(900 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0864 + 21994286-21994989,21996257-21996958,21997221-219973... 33 0.31
07_03_1228 - 25009736-25010965 31 1.2
01_07_0344 - 42869465-42869502,42869597-42869771,42869923-428701... 31 1.6
04_04_1374 - 33028790-33028951,33029033-33029087,33029402-330294... 30 2.2
08_01_0047 - 328895-329404,329492-329821,330253-330626,330712-33... 30 2.9
05_07_0251 - 28677293-28677748,28677891-28678217 30 2.9
12_01_0166 - 1241367-1241879,1241959-1242274,1243197-1243266,124... 29 3.8
02_02_0277 + 8489717-8491468,8491571-8491610,8491719-8491841,849... 29 5.0
11_04_0350 - 16658497-16659015 29 6.7
04_03_0808 - 19872656-19873165,19873251-19873583,19874443-198745... 29 6.7
12_02_1004 + 25202732-25202783,25202997-25203181,25203269-252035... 28 8.8
12_02_0250 - 16432160-16432672,16432751-16433066,16433524-164339... 28 8.8
07_03_1652 - 28409097-28409165,28409788-28409911,28410317-284105... 28 8.8
07_03_0014 - 12428713-12428860,12429340-12429580,12429664-124303... 28 8.8
05_03_0622 - 16293341-16293350,16293783-16294063,16294343-162944... 28 8.8
05_01_0595 + 5344721-5345249,5349183-5349264,5349813-5350507,535... 28 8.8
04_01_0261 + 3516461-3516629,3517729-3517823,3518724-3518834,351... 28 8.8
03_03_0039 - 13986844-13986907,13987219-13987273,13987492-139876... 28 8.8
02_04_0516 + 23593088-23593116,23593209-23593336,23593527-235937... 28 8.8
01_06_1580 - 38406740-38407257,38407481-38407552,38408309-384083... 28 8.8
01_06_0102 - 26447286-26448107,26448248-26448385,26448990-264493... 28 8.8
01_01_1009 + 7992040-7992287,7992747-7993144,7993301-7993441,799... 28 8.8
>08_02_0864 +
21994286-21994989,21996257-21996958,21997221-21997374,
21997494-21997838,21998323-21999240,21999312-21999640,
21999709-21999832,21999901-22000071,22000188-22001648,
22002647-22002910,22003866-22004189
Length = 1831
Score = 33.1 bits (72), Expect = 0.31
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
Frame = +2
Query: 326 CYFCQA----VQRLPTCAHCGKVKCMLKSGDCVIRHPGVYNTGMGMVGAICDFC 475
CY C A + R C HCG+V C + + V R PG G +C++C
Sbjct: 70 CYDCDAQFTILNRRHHCRHCGRVFCARCTANSVPRAPGDAAREDGERIRVCNYC 123
>07_03_1228 - 25009736-25010965
Length = 409
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 641 EHQASCQVLESETYKCQSCNRIGQYSCLRCKTC 739
EHQ + L++ + C+ C + G +C RCK+C
Sbjct: 12 EHQLTRTKLKNP-FNCKVCTKPGDTTCYRCKSC 43
>01_07_0344 -
42869465-42869502,42869597-42869771,42869923-42870117,
42870678-42870788,42870899-42871111,42871551-42871658,
42871732-42871873,42872150-42873449,42874032-42874085,
42874491-42874923
Length = 922
Score = 30.7 bits (66), Expect = 1.6
Identities = 26/98 (26%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Frame = -3
Query: 700 VTRLTLVGFRFQNLT*GL-MLKLVIFAQKSLAETAPENPTTMLPYTSLALQAHGIHERTG 524
V +L ++ F+ + +T L M++ + + + A N T +L +S +Q +G+H TG
Sbjct: 159 VLKLLIILFKAKEITSDLYMMQDDSYQHDTDRQGANCNGTDLL--SSSKVQ-YGLHRETG 215
Query: 523 ARMGRETFSTMTHPCLTEVTYSTHHSHSRVVNTWMSNN 410
A G + S PCL E + HS++ ++ + +S +
Sbjct: 216 AISGLHSDSKA--PCLPENQNESSHSYASIIGSSLSRS 251
>04_04_1374 -
33028790-33028951,33029033-33029087,33029402-33029466,
33029558-33029701,33029825-33029878,33029971-33030220,
33030340-33030446,33031206-33031216,33032682-33032796,
33032897-33033005,33033088-33033203,33033288-33033647
Length = 515
Score = 30.3 bits (65), Expect = 2.2
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = +2
Query: 287 CDKCQKKQKTRAFCYFCQAVQRLPTCAHCGKVKCMLKSGDCVIRH 421
C CQK+ K C CQ L C CG V C IRH
Sbjct: 239 CQFCQKQSKNPT-CSVCQTSGNLWICIICGFVGCGRYEEGHAIRH 282
>08_01_0047 -
328895-329404,329492-329821,330253-330626,330712-330937,
331026-331475
Length = 629
Score = 29.9 bits (64), Expect = 2.9
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 618 FCAKMTSLSIRPHVKFWNRKPTSVNRV 698
FC T I+ H+K W +K T +NR+
Sbjct: 407 FCTNFTGDQIKNHLKTWQKKFTKMNRL 433
>05_07_0251 - 28677293-28677748,28677891-28678217
Length = 260
Score = 29.9 bits (64), Expect = 2.9
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 618 FCAKMTSLSIRPHVKFWNRKPTSVNRV 698
FC T I+ H+K W +K T +NR+
Sbjct: 56 FCTNFTGDQIKNHLKTWQKKFTKMNRL 82
>12_01_0166 -
1241367-1241879,1241959-1242274,1243197-1243266,
1243351-1243576,1243664-1243851,1244065-1244176,
1245371-1245664
Length = 572
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 612 KDFCAKMTSLSIRPHVKFWNRKPTSVNRV 698
K F + +T I+ H+K W RK T +NR+
Sbjct: 347 KRFNSTLTGEQIKNHLKTWQRKFTKINRL 375
>02_02_0277 +
8489717-8491468,8491571-8491610,8491719-8491841,
8491959-8492014
Length = 656
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/48 (29%), Positives = 28/48 (58%)
Frame = -2
Query: 680 RFPIPKLDMRPDAQTGHLRTKILGRNSTGKPDHHAPIHLSRTPSTRHP 537
+FP P +D+R ++ ++ ++ +S +P H P + +RTPS + P
Sbjct: 432 KFPPPPIDVRFLDRSDSVKHHMV-LDSKSRPLSHTPTYSARTPSMKKP 478
>11_04_0350 - 16658497-16659015
Length = 172
Score = 28.7 bits (61), Expect = 6.7
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +2
Query: 158 KNMPKKKTGQRKKAEKQKLRQKEIRAAREHV 250
K KKK ++KK +K+K ++K++R +E +
Sbjct: 32 KKKKKKKKKKKKKKKKKKKKKKKVRYTQEQI 62
>04_03_0808 -
19872656-19873165,19873251-19873583,19874443-19874543,
19874628-19874853,19874941-19875079,19875339-19875451,
19875628-19875911,19876287-19876326
Length = 581
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = +3
Query: 591 FSGAVSAKDFCAKMTSLSIRPHVKFWNRKPTSVNRVTVLG 710
++ AV+ + F + +T I+ H+K W RK + +NR+ +G
Sbjct: 351 YARAVNER-FNSTLTGEQIKNHLKTWQRKFSKINRLRKVG 389
>12_02_1004 +
25202732-25202783,25202997-25203181,25203269-25203509,
25203617-25204022,25204618-25204795,25204875-25205387
Length = 524
Score = 28.3 bits (60), Expect = 8.8
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 618 FCAKMTSLSIRPHVKFWNRKPTSVNRV 698
F + +T I+ H+K W RK T +NR+
Sbjct: 301 FNSTLTGEQIKNHLKTWQRKFTKINRL 327
>12_02_0250 -
16432160-16432672,16432751-16433066,16433524-16433962,
16434037-16434277,16434365-16434549,16434763-16434814
Length = 581
Score = 28.3 bits (60), Expect = 8.8
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 618 FCAKMTSLSIRPHVKFWNRKPTSVNRV 698
F + +T I+ H+K W RK T +NR+
Sbjct: 358 FNSTLTGEQIKNHLKTWQRKFTKINRL 384
>07_03_1652 - 28409097-28409165,28409788-28409911,28410317-28410557,
28410641-28411375,28411464-28411667,28411741-28412422,
28412517-28412773,28412849-28413543,28414003-28414250
Length = 1084
Score = 28.3 bits (60), Expect = 8.8
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -2
Query: 647 DAQTGHLRTKILGRNSTGKPDHHAPIHLSRTPSTRHP*EDRCTHG 513
D Q G T + R T + DHH+P+ + H +D+ HG
Sbjct: 912 DGQGGQGTTNVPPRGHTQQSDHHSPVQFTGEGDFTHATQDQ-DHG 955
>07_03_0014 - 12428713-12428860,12429340-12429580,12429664-12430398,
12430487-12430690,12430764-12431445,12431540-12431796,
12431872-12432566,12433012-12433172,12434039-12434383,
12434399-12434631,12434656-12434740
Length = 1261
Score = 28.3 bits (60), Expect = 8.8
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -2
Query: 647 DAQTGHLRTKILGRNSTGKPDHHAPIHLSRTPSTRHP*EDRCTHG 513
D Q G T + R T + DHH+P+ + H +D+ HG
Sbjct: 1104 DGQGGQGTTNVPPRGHTQQSDHHSPVQFTGEGDFTHATQDQ-DHG 1147
>05_03_0622 -
16293341-16293350,16293783-16294063,16294343-16294474,
16294561-16294741,16295054-16295096,16295183-16295249,
16296708-16296834,16296985-16297620,16298253-16298761,
16298842-16299157,16299615-16300053,16300128-16300353,
16300441-16300625,16300839-16300950,16301459-16301495,
16301977-16302011,16302497-16302810,16303463-16303475
Length = 1220
Score = 28.3 bits (60), Expect = 8.8
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 618 FCAKMTSLSIRPHVKFWNRKPTSVNRV 698
F + +T I+ H+K W RK T +NR+
Sbjct: 506 FNSTLTGEQIKNHLKTWQRKFTKINRL 532
>05_01_0595 + 5344721-5345249,5349183-5349264,5349813-5350507,
5350583-5350839,5350934-5351615,5351689-5351892,
5351981-5352715,5352799-5353181
Length = 1188
Score = 28.3 bits (60), Expect = 8.8
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -2
Query: 647 DAQTGHLRTKILGRNSTGKPDHHAPIHLSRTPSTRHP*EDRCTHG 513
D Q G T + R T + DHH+P+ + H +D+ HG
Sbjct: 1033 DGQGGQGTTNVPPRGHTQQSDHHSPVQFTGEGDFTHATQDQ-DHG 1076
>04_01_0261 +
3516461-3516629,3517729-3517823,3518724-3518834,
3519179-3519213,3519864-3519954,3520124-3520196,
3521127-3521257,3524325-3524720
Length = 366
Score = 28.3 bits (60), Expect = 8.8
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +2
Query: 113 NGDSNCVRCYICK*NKNMPKKKTGQRKKAEKQKL-RQKEIRAAREHV 250
+G + + Y+ K +N+ KK+ K +K+K +KEIR RE +
Sbjct: 183 SGTIDLMALYLTKKYENLTKKRNEDLAKLKKEKEDMEKEIRGLRERI 229
>03_03_0039 -
13986844-13986907,13987219-13987273,13987492-13987606,
13987652-13987774,13987962-13988015,13988352-13988411,
13988522-13988584,13988790-13988863,13989177-13989261,
13989376-13989456,13989764-13989856,13990275-13990339,
13990407-13990482,13990570-13990635,13991094-13991153,
13991233-13991322,13991755-13991817,13992502-13992625,
13993031-13993271,13993355-13993624,13993715-13994089,
13994178-13994381,13994455-13995136,13995231-13995279,
13995362-13995488,13995564-13996258,13996718-13996965
Length = 1433
Score = 28.3 bits (60), Expect = 8.8
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -2
Query: 647 DAQTGHLRTKILGRNSTGKPDHHAPIHLSRTPSTRHP*EDRCTHG 513
D Q G T + R T + DHH+P+ + H +D+ HG
Sbjct: 855 DGQGGQGTTNVPPRGHTQQSDHHSPVQFTGEGDFTHATQDQ-DHG 898
>02_04_0516 +
23593088-23593116,23593209-23593336,23593527-23593714,
23593861-23593919,23594997-23595345,23596081-23596333,
23596404-23597476
Length = 692
Score = 28.3 bits (60), Expect = 8.8
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +2
Query: 149 K*NKNMPKKKTGQRKKAEKQKLRQKEIRAAREHVDLAQH 265
K K KKK ++KK +K+K ++K+ + R + AQH
Sbjct: 78 KKKKKKKKKKKNKKKKKKKKKKKKKKKKKKRWPSNKAQH 116
>01_06_1580 -
38406740-38407257,38407481-38407552,38408309-38408365,
38408476-38408532,38408643-38408699,38408809-38408865,
38409371-38409424,38409744-38409800,38410023-38410076,
38412208-38412220,38413530-38413580,38414134-38414193,
38414640-38414761,38415033-38415894,38416468-38416667,
38417159-38417238,38417525-38417619
Length = 821
Score = 28.3 bits (60), Expect = 8.8
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 674 ETYKCQSCNRIGQYSCLRC 730
E +KC SC R +Y CL C
Sbjct: 59 ELHKCVSCKRNSEYHCLCC 77
>01_06_0102 -
26447286-26448107,26448248-26448385,26448990-26449359,
26449505-26449606,26449696-26449788,26449934-26450181,
26451088-26451274,26451825-26452043,26452464-26452660,
26453545-26453875,26454099-26454457,26455141-26455240,
26455349-26455464,26455547-26455663,26455782-26455880,
26456057-26456131,26456205-26456286,26457724-26457763,
26458685-26458769,26458924-26459055
Length = 1303
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +2
Query: 188 RKKAEKQKLRQKEIRAAREHVDLA 259
+K+ E+ K R+ + RAA EH DLA
Sbjct: 667 KKRKEEMKAREAQSRAAAEHGDLA 690
>01_01_1009 +
7992040-7992287,7992747-7993144,7993301-7993441,
7993517-7993773,7993868-7994169,7994342-7994580,
7994654-7994857,7994946-7995680,7995764-7996155
Length = 971
Score = 28.3 bits (60), Expect = 8.8
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -2
Query: 647 DAQTGHLRTKILGRNSTGKPDHHAPIHLSRTPSTRHP*EDRCTHG 513
D Q G T + R T + DHH+P+ + H +D+ HG
Sbjct: 813 DGQGGQGTTNVPPRGHTQQSDHHSPVQFTGEGDFTHATQDQ-DHG 856
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,058,383
Number of Sequences: 37544
Number of extensions: 539891
Number of successful extensions: 1839
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1779
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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