Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_L11
(900 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 38 0.007
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 38 0.007
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 38 0.007
Z70038-6|CAA93882.3| 1323|Caenorhabditis elegans Hypothetical pr... 36 0.052
X57767-1|CAA40919.1| 1323|Caenorhabditis elegans tyrosine kinase... 36 0.052
D63426-1|BAA09729.1| 1374|Caenorhabditis elegans receptor tyrosi... 36 0.052
Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr... 31 1.1
L23651-4|AAU87828.2| 294|Caenorhabditis elegans Hypothetical pr... 31 1.1
L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra... 31 1.1
AF022981-1|AAG24206.1| 455|Caenorhabditis elegans Hypothetical ... 31 1.5
AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin relat... 30 2.0
AL132876-7|CAD21659.1| 449|Caenorhabditis elegans Hypothetical ... 30 2.6
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z37983-5|CAA86059.2| 405|Caenorhabditis elegans Hypothetical pr... 29 3.4
U40939-3|ABD63235.1| 960|Caenorhabditis elegans Hunchback like ... 29 3.4
U40939-2|AAA81701.3| 982|Caenorhabditis elegans Hunchback like ... 29 3.4
AF097737-1|AAD16170.1| 982|Caenorhabditis elegans hunchback-rel... 29 3.4
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr... 29 3.4
Z71264-5|CAA95829.1| 241|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z35604-2|CAA84677.1| 809|Caenorhabditis elegans Hypothetical pr... 29 4.5
U19744-1|AAA85704.1| 809|Caenorhabditis elegans integrin beta p... 29 4.5
U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile (un... 29 4.5
AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical ... 29 4.5
U23520-5|AAC46554.4| 975|Caenorhabditis elegans Mammalian vav (... 29 6.0
U23520-4|ABB88236.1| 1007|Caenorhabditis elegans Mammalian vav (... 29 6.0
DQ136172-1|AAZ66767.1| 1007|Caenorhabditis elegans VAV-1 protein. 29 6.0
Z68297-2|CAA92594.3| 522|Caenorhabditis elegans Hypothetical pr... 28 7.9
AL021503-6|CAA16424.2| 459|Caenorhabditis elegans Hypothetical ... 28 7.9
AL021497-11|CAA16401.1| 54|Caenorhabditis elegans Hypothetical... 28 7.9
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 38.3 bits (85), Expect = 0.007
Identities = 42/152 (27%), Positives = 53/152 (34%), Gaps = 26/152 (17%)
Frame = +2
Query: 362 CAHCGKVKCMLKSGDCVIRHPGVYNTGMGMVGAICDFCEA--WV------CHGRKCLTSH 517
C+ CG C KSG C + + + G CD C+ W C G C T+
Sbjct: 1992 CSQCGSQYCDNKSGGCECK--------INVEGDSCDRCKPDHWGFSKCQGCQGCHCGTAA 2043
Query: 518 ----------ACTC-PLMDAV-CLECERGVWEHGGRVFRCCFCQGFLCEDDQFE-HQASC 658
CTC P + C CE G W +G C C+ L + C
Sbjct: 2044 FNTQCNVENGQCTCRPGATGMRCEHCEHGYWNYGEHGCDKCDCEADLSMGTVCDVRTGQC 2103
Query: 659 QVLESET-YKCQSC----NRIGQYSCLRCKTC 739
E T +C C RI Y C RC C
Sbjct: 2104 HCQEGATGSRCDQCLPSYLRIPTYGCRRCDEC 2135
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 38.3 bits (85), Expect = 0.007
Identities = 42/152 (27%), Positives = 53/152 (34%), Gaps = 26/152 (17%)
Frame = +2
Query: 362 CAHCGKVKCMLKSGDCVIRHPGVYNTGMGMVGAICDFCEA--WV------CHGRKCLTSH 517
C+ CG C KSG C + + + G CD C+ W C G C T+
Sbjct: 1992 CSQCGSQYCDNKSGGCECK--------INVEGDSCDRCKPDHWGFSKCQGCQGCHCGTAA 2043
Query: 518 ----------ACTC-PLMDAV-CLECERGVWEHGGRVFRCCFCQGFLCEDDQFE-HQASC 658
CTC P + C CE G W +G C C+ L + C
Sbjct: 2044 FNTQCNVENGQCTCRPGATGMRCEHCEHGYWNYGEHGCDKCDCEADLSMGTVCDVRTGQC 2103
Query: 659 QVLESET-YKCQSC----NRIGQYSCLRCKTC 739
E T +C C RI Y C RC C
Sbjct: 2104 HCQEGATGSRCDQCLPSYLRIPTYGCRRCDEC 2135
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 38.3 bits (85), Expect = 0.007
Identities = 42/152 (27%), Positives = 53/152 (34%), Gaps = 26/152 (17%)
Frame = +2
Query: 362 CAHCGKVKCMLKSGDCVIRHPGVYNTGMGMVGAICDFCEA--WV------CHGRKCLTSH 517
C+ CG C KSG C + + + G CD C+ W C G C T+
Sbjct: 1992 CSQCGSQYCDNKSGGCECK--------INVEGDSCDRCKPDHWGFSKCQGCQGCHCGTAA 2043
Query: 518 ----------ACTC-PLMDAV-CLECERGVWEHGGRVFRCCFCQGFLCEDDQFE-HQASC 658
CTC P + C CE G W +G C C+ L + C
Sbjct: 2044 FNTQCNVENGQCTCRPGATGMRCEHCEHGYWNYGEHGCDKCDCEADLSMGTVCDVRTGQC 2103
Query: 659 QVLESET-YKCQSC----NRIGQYSCLRCKTC 739
E T +C C RI Y C RC C
Sbjct: 2104 HCQEGATGSRCDQCLPSYLRIPTYGCRRCDEC 2135
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 38.3 bits (85), Expect = 0.007
Identities = 42/152 (27%), Positives = 53/152 (34%), Gaps = 26/152 (17%)
Frame = +2
Query: 362 CAHCGKVKCMLKSGDCVIRHPGVYNTGMGMVGAICDFCEA--WV------CHGRKCLTSH 517
C+ CG C KSG C + + + G CD C+ W C G C T+
Sbjct: 1992 CSQCGSQYCDNKSGGCECK--------INVEGDSCDRCKPDHWGFSKCQGCQGCHCGTAA 2043
Query: 518 ----------ACTC-PLMDAV-CLECERGVWEHGGRVFRCCFCQGFLCEDDQFE-HQASC 658
CTC P + C CE G W +G C C+ L + C
Sbjct: 2044 FNTQCNVENGQCTCRPGATGMRCEHCEHGYWNYGEHGCDKCDCEADLSMGTVCDVRTGQC 2103
Query: 659 QVLESET-YKCQSC----NRIGQYSCLRCKTC 739
E T +C C RI Y C RC C
Sbjct: 2104 HCQEGATGSRCDQCLPSYLRIPTYGCRRCDEC 2135
>Z70038-6|CAA93882.3| 1323|Caenorhabditis elegans Hypothetical
protein ZK1067.1 protein.
Length = 1323
Score = 35.5 bits (78), Expect = 0.052
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +2
Query: 548 CLECERGVWEHGGRVFRCCFCQGFLCEDDQFEHQASCQVLESETYKCQSCNRIGQYSCLR 727
CLEC+ W+ G C +GFL + C+ E C++CN +G+ CL
Sbjct: 537 CLECK--TWKSVGTCVEKCDTKGFLRNQTSMK----CERCSPE---CETCNGLGELDCLT 587
Query: 728 CK 733
C+
Sbjct: 588 CR 589
>X57767-1|CAA40919.1| 1323|Caenorhabditis elegans tyrosine kinase
protein.
Length = 1323
Score = 35.5 bits (78), Expect = 0.052
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +2
Query: 548 CLECERGVWEHGGRVFRCCFCQGFLCEDDQFEHQASCQVLESETYKCQSCNRIGQYSCLR 727
CLEC+ W+ G C +GFL + C+ E C++CN +G+ CL
Sbjct: 537 CLECK--TWKSVGTCVEKCDTKGFLRNQTSMK----CERCSPE---CETCNGLGELDCLT 587
Query: 728 CK 733
C+
Sbjct: 588 CR 589
>D63426-1|BAA09729.1| 1374|Caenorhabditis elegans receptor tyrosine
kinase protein.
Length = 1374
Score = 35.5 bits (78), Expect = 0.052
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +2
Query: 548 CLECERGVWEHGGRVFRCCFCQGFLCEDDQFEHQASCQVLESETYKCQSCNRIGQYSCLR 727
CLEC+ W+ G C +GFL + C+ E C++CN +G+ CL
Sbjct: 588 CLECK--TWKSVGTCVEKCDTKGFLRNQTSMK----CERCSPE---CETCNGLGELDCLT 638
Query: 728 CK 733
C+
Sbjct: 639 CR 640
>Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 31.1 bits (67), Expect = 1.1
Identities = 30/111 (27%), Positives = 40/111 (36%)
Frame = +2
Query: 422 PGVYNTGMGMVGAICDFCEAWVCHGRKCLTSHACTCPLMDAVCLECERGVWEHGGRVFRC 601
PG TG G+ +C+ CE C+G HA C CL+C +H +C
Sbjct: 938 PGYSRTGGGLYLGLCEKCE---CNG------HASQCDKEYGYCLDC-----QHNTEGDQC 983
Query: 602 CFCQGFLCEDDQFEHQASCQVLESETYKCQSCNRIGQYSCLRCKTCFCEEH 754
C+ D + CQ E+ C CN C C EH
Sbjct: 984 ERCKPGFVGDARRGTPNDCQP-EATRAPCH-CNNHSPRGCDSFGRCLLCEH 1032
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 31.1 bits (67), Expect = 1.1
Identities = 30/111 (27%), Positives = 40/111 (36%)
Frame = +2
Query: 422 PGVYNTGMGMVGAICDFCEAWVCHGRKCLTSHACTCPLMDAVCLECERGVWEHGGRVFRC 601
PG TG G+ +C+ CE C+G HA C CL+C +H +C
Sbjct: 938 PGYSRTGGGLYLGLCEKCE---CNG------HASQCDKEYGYCLDC-----QHNTEGDQC 983
Query: 602 CFCQGFLCEDDQFEHQASCQVLESETYKCQSCNRIGQYSCLRCKTCFCEEH 754
C+ D + CQ E+ C CN C C EH
Sbjct: 984 ERCKPGFVGDARRGTPNDCQP-EATRAPCH-CNNHSPRGCDSFGRCLLCEH 1032
>Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 31.1 bits (67), Expect = 1.1
Identities = 30/111 (27%), Positives = 40/111 (36%)
Frame = +2
Query: 422 PGVYNTGMGMVGAICDFCEAWVCHGRKCLTSHACTCPLMDAVCLECERGVWEHGGRVFRC 601
PG TG G+ +C+ CE C+G HA C CL+C +H +C
Sbjct: 938 PGYSRTGGGLYLGLCEKCE---CNG------HASQCDKEYGYCLDC-----QHNTEGDQC 983
Query: 602 CFCQGFLCEDDQFEHQASCQVLESETYKCQSCNRIGQYSCLRCKTCFCEEH 754
C+ D + CQ E+ C CN C C EH
Sbjct: 984 ERCKPGFVGDARRGTPNDCQP-EATRAPCH-CNNHSPRGCDSFGRCLLCEH 1032
>Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 31.1 bits (67), Expect = 1.1
Identities = 30/111 (27%), Positives = 40/111 (36%)
Frame = +2
Query: 422 PGVYNTGMGMVGAICDFCEAWVCHGRKCLTSHACTCPLMDAVCLECERGVWEHGGRVFRC 601
PG TG G+ +C+ CE C+G HA C CL+C +H +C
Sbjct: 938 PGYSRTGGGLYLGLCEKCE---CNG------HASQCDKEYGYCLDC-----QHNTEGDQC 983
Query: 602 CFCQGFLCEDDQFEHQASCQVLESETYKCQSCNRIGQYSCLRCKTCFCEEH 754
C+ D + CQ E+ C CN C C EH
Sbjct: 984 ERCKPGFVGDARRGTPNDCQP-EATRAPCH-CNNHSPRGCDSFGRCLLCEH 1032
>Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical protein
ZC101.2b protein.
Length = 1160
Score = 31.1 bits (67), Expect = 1.1
Identities = 30/111 (27%), Positives = 40/111 (36%)
Frame = +2
Query: 422 PGVYNTGMGMVGAICDFCEAWVCHGRKCLTSHACTCPLMDAVCLECERGVWEHGGRVFRC 601
PG TG G+ +C+ CE C+G HA C CL+C +H +C
Sbjct: 938 PGYSRTGGGLYLGLCEKCE---CNG------HASQCDKEYGYCLDC-----QHNTEGDQC 983
Query: 602 CFCQGFLCEDDQFEHQASCQVLESETYKCQSCNRIGQYSCLRCKTCFCEEH 754
C+ D + CQ E+ C CN C C EH
Sbjct: 984 ERCKPGFVGDARRGTPNDCQP-EATRAPCH-CNNHSPRGCDSFGRCLLCEH 1032
>Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 31.1 bits (67), Expect = 1.1
Identities = 30/111 (27%), Positives = 40/111 (36%)
Frame = +2
Query: 422 PGVYNTGMGMVGAICDFCEAWVCHGRKCLTSHACTCPLMDAVCLECERGVWEHGGRVFRC 601
PG TG G+ +C+ CE C+G HA C CL+C +H +C
Sbjct: 938 PGYSRTGGGLYLGLCEKCE---CNG------HASQCDKEYGYCLDC-----QHNTEGDQC 983
Query: 602 CFCQGFLCEDDQFEHQASCQVLESETYKCQSCNRIGQYSCLRCKTCFCEEH 754
C+ D + CQ E+ C CN C C EH
Sbjct: 984 ERCKPGFVGDARRGTPNDCQP-EATRAPCH-CNNHSPRGCDSFGRCLLCEH 1032
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 31.1 bits (67), Expect = 1.1
Identities = 30/111 (27%), Positives = 40/111 (36%)
Frame = +2
Query: 422 PGVYNTGMGMVGAICDFCEAWVCHGRKCLTSHACTCPLMDAVCLECERGVWEHGGRVFRC 601
PG TG G+ +C+ CE C+G HA C CL+C +H +C
Sbjct: 938 PGYSRTGGGLYLGLCEKCE---CNG------HASQCDKEYGYCLDC-----QHNTEGDQC 983
Query: 602 CFCQGFLCEDDQFEHQASCQVLESETYKCQSCNRIGQYSCLRCKTCFCEEH 754
C+ D + CQ E+ C CN C C EH
Sbjct: 984 ERCKPGFVGDARRGTPNDCQP-EATRAPCH-CNNHSPRGCDSFGRCLLCEH 1032
>Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 31.1 bits (67), Expect = 1.1
Identities = 30/111 (27%), Positives = 40/111 (36%)
Frame = +2
Query: 422 PGVYNTGMGMVGAICDFCEAWVCHGRKCLTSHACTCPLMDAVCLECERGVWEHGGRVFRC 601
PG TG G+ +C+ CE C+G HA C CL+C +H +C
Sbjct: 938 PGYSRTGGGLYLGLCEKCE---CNG------HASQCDKEYGYCLDC-----QHNTEGDQC 983
Query: 602 CFCQGFLCEDDQFEHQASCQVLESETYKCQSCNRIGQYSCLRCKTCFCEEH 754
C+ D + CQ E+ C CN C C EH
Sbjct: 984 ERCKPGFVGDARRGTPNDCQP-EATRAPCH-CNNHSPRGCDSFGRCLLCEH 1032
>Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 31.1 bits (67), Expect = 1.1
Identities = 30/111 (27%), Positives = 40/111 (36%)
Frame = +2
Query: 422 PGVYNTGMGMVGAICDFCEAWVCHGRKCLTSHACTCPLMDAVCLECERGVWEHGGRVFRC 601
PG TG G+ +C+ CE C+G HA C CL+C +H +C
Sbjct: 938 PGYSRTGGGLYLGLCEKCE---CNG------HASQCDKEYGYCLDC-----QHNTEGDQC 983
Query: 602 CFCQGFLCEDDQFEHQASCQVLESETYKCQSCNRIGQYSCLRCKTCFCEEH 754
C+ D + CQ E+ C CN C C EH
Sbjct: 984 ERCKPGFVGDARRGTPNDCQP-EATRAPCH-CNNHSPRGCDSFGRCLLCEH 1032
>L23651-4|AAU87828.2| 294|Caenorhabditis elegans Hypothetical
protein C29E4.13 protein.
Length = 294
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = +2
Query: 599 CCFCQGFLCEDDQFEHQASCQVLESETYKCQSCNRIGQYS 718
CC C + FE+ C L+ Y+C C + G Y+
Sbjct: 118 CCHCNAIIKTWRGFEYHVLCTHLKYRPYRCFHCKKDGFYT 157
>L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane
proteoglycan protein.
Length = 2481
Score = 31.1 bits (67), Expect = 1.1
Identities = 30/111 (27%), Positives = 40/111 (36%)
Frame = +2
Query: 422 PGVYNTGMGMVGAICDFCEAWVCHGRKCLTSHACTCPLMDAVCLECERGVWEHGGRVFRC 601
PG TG G+ +C+ CE C+G HA C CL+C +H +C
Sbjct: 937 PGYSRTGGGLYLGLCEKCE---CNG------HASQCDKEYGYCLDC-----QHNTEGDQC 982
Query: 602 CFCQGFLCEDDQFEHQASCQVLESETYKCQSCNRIGQYSCLRCKTCFCEEH 754
C+ D + CQ E+ C CN C C EH
Sbjct: 983 ERCKPGFVGDARRGTPNDCQP-EATRAPCH-CNNHSPRGCDSFGRCLLCEH 1031
>AF022981-1|AAG24206.1| 455|Caenorhabditis elegans Hypothetical
protein W03F9.1 protein.
Length = 455
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 4/61 (6%)
Frame = +2
Query: 251 DLAQHPCNVAMECDKCQKKQKTRAFC----YFCQAVQRLPTCAHCGKVKCMLKSGDCVIR 418
D P V C C++ +TR C Y+ + C HCG ++SG+ V
Sbjct: 16 DYEAAPIVVDSVCPVCEEDGETRIMCTSIPYYRAVILMSFECPHCGHKNNEIQSGEAVQE 75
Query: 419 H 421
H
Sbjct: 76 H 76
>AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin related.
see also lmb-protein 1 protein.
Length = 1067
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 5/63 (7%)
Frame = +2
Query: 386 CMLKSGDCVIRHPGVYNTGMGMVGAICDFCEA--W---VCHGRKCLTSHACTCPLMDAVC 550
C +SG CV R G+Y G C+ C+ W C +C HA C C
Sbjct: 857 CDKQSGQCVCREKGIY-------GRQCNQCQPGFWGFPECRTCQC-NDHANICDQSSGAC 908
Query: 551 LEC 559
+EC
Sbjct: 909 IEC 911
Score = 29.9 bits (64), Expect = 2.6
Identities = 20/72 (27%), Positives = 29/72 (40%), Gaps = 3/72 (4%)
Frame = +2
Query: 548 CLECERGVWEHGGRVFRCCFCQ--GFLCED-DQFEHQASCQVLESETYKCQSCNRIGQYS 718
C +C G + G + C C G L D D+ Q C+ +C C G +
Sbjct: 827 CDQCAIGTYGFGPSGCKKCDCDAVGSLGNDCDKQSGQCVCREKGIYGRQCNQCQP-GFWG 885
Query: 719 CLRCKTCFCEEH 754
C+TC C +H
Sbjct: 886 FPECRTCQCNDH 897
>AL132876-7|CAD21659.1| 449|Caenorhabditis elegans Hypothetical
protein Y105E8A.8 protein.
Length = 449
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +2
Query: 158 KNMPKKKTGQRKKAEKQKLRQKEIRAAREHVDLAQHPCNVAME-CDKCQKKQKTRAFCY 331
+N P + +RK Q++ Q+ + A+E V++A+ P N+ CDK F Y
Sbjct: 62 ENRPLNRKEKRKLQRMQEIDQEVKKKAQEPVEIAEIPTNLKNTFCDKATFNSYNAQFGY 120
>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 257 LNLHVRERPESLSGATSVSLLFYVDRSFSLAC 162
+N+HVR +P SG T L + RS +L C
Sbjct: 1997 INVHVRTKPRFESGLTESELTVNLTRSITLEC 2028
>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 257 LNLHVRERPESLSGATSVSLLFYVDRSFSLAC 162
+N+HVR +P SG T L + RS +L C
Sbjct: 1997 INVHVRTKPRFESGLTESELTVNLTRSITLEC 2028
>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 257 LNLHVRERPESLSGATSVSLLFYVDRSFSLAC 162
+N+HVR +P SG T L + RS +L C
Sbjct: 1997 INVHVRTKPRFESGLTESELTVNLTRSITLEC 2028
>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 257 LNLHVRERPESLSGATSVSLLFYVDRSFSLAC 162
+N+HVR +P SG T L + RS +L C
Sbjct: 1997 INVHVRTKPRFESGLTESELTVNLTRSITLEC 2028
>Z37983-5|CAA86059.2| 405|Caenorhabditis elegans Hypothetical
protein B0393.6 protein.
Length = 405
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +2
Query: 665 LESETYKCQSC-NRIGQYSCLRCKTC 739
LESET +C C NR+ + +C+TC
Sbjct: 84 LESETRQCDECNNRVARSMLRQCETC 109
>U40939-3|ABD63235.1| 960|Caenorhabditis elegans Hunchback like
(fly gap gene related)protein 1, isoform b protein.
Length = 960
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 587 RVFRCCFC-QGFLCEDDQFEHQASCQVLESETYKCQSCNRIGQY 715
++F+C C L +DDQ+ H A + + CQ CN + +Y
Sbjct: 514 KIFKCKQCGHQSLSKDDQWAH-ARTHIPAEKQLNCQHCNFVTEY 556
>U40939-2|AAA81701.3| 982|Caenorhabditis elegans Hunchback like
(fly gap gene related)protein 1, isoform a protein.
Length = 982
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 587 RVFRCCFC-QGFLCEDDQFEHQASCQVLESETYKCQSCNRIGQY 715
++F+C C L +DDQ+ H A + + CQ CN + +Y
Sbjct: 536 KIFKCKQCGHQSLSKDDQWAH-ARTHIPAEKQLNCQHCNFVTEY 578
>AF097737-1|AAD16170.1| 982|Caenorhabditis elegans
hunchback-related protein protein.
Length = 982
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 587 RVFRCCFC-QGFLCEDDQFEHQASCQVLESETYKCQSCNRIGQY 715
++F+C C L +DDQ+ H A + + CQ CN + +Y
Sbjct: 536 KIFKCKQCGHQSLSKDDQWAH-ARTHIPAEKQLNCQHCNFVTEY 578
>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
precursor protein.
Length = 5198
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 257 LNLHVRERPESLSGATSVSLLFYVDRSFSLAC 162
+N+HVR +P SG T L + RS +L C
Sbjct: 1997 INVHVRTKPRFESGLTESELTVNLTRSITLEC 2028
>Z71264-5|CAA95829.1| 241|Caenorhabditis elegans Hypothetical
protein K07G5.2 protein.
Length = 241
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/52 (25%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +2
Query: 548 CLECERGVWEHG-GRVFRCCFCQGFLCEDDQFEHQASCQVLESETYKCQSCN 700
C +C++G+ + + C C C DD+ EH+ + TY + C+
Sbjct: 71 CEKCDKGLMDSWLWERYNCAVCDA--CRDDKGEHKLLARTEVKNTYLLKDCD 120
>Z35604-2|CAA84677.1| 809|Caenorhabditis elegans Hypothetical
protein ZK1058.2 protein.
Length = 809
Score = 29.1 bits (62), Expect = 4.5
Identities = 19/72 (26%), Positives = 27/72 (37%), Gaps = 5/72 (6%)
Frame = +2
Query: 488 CHGRKCL-----TSHACTCPLMDAVCLECERGVWEHGGRVFRCCFCQGFLCEDDQFEHQA 652
C+ KC+ T AC CP+ CL + G C C+ F D A
Sbjct: 584 CNCGKCICAPGWTGRACECPISTDSCLSANGKICNGKGECI-CGRCRCFDSPDGNRYSGA 642
Query: 653 SCQVLESETYKC 688
C++ + KC
Sbjct: 643 KCEICPTCPTKC 654
>U19744-1|AAA85704.1| 809|Caenorhabditis elegans integrin beta
pat-3 protein.
Length = 809
Score = 29.1 bits (62), Expect = 4.5
Identities = 19/72 (26%), Positives = 27/72 (37%), Gaps = 5/72 (6%)
Frame = +2
Query: 488 CHGRKCL-----TSHACTCPLMDAVCLECERGVWEHGGRVFRCCFCQGFLCEDDQFEHQA 652
C+ KC+ T AC CP+ CL + G C C+ F D A
Sbjct: 584 CNCGKCICAPGWTGRACECPISTDSCLSANGKICNGKGECI-CGRCRCFDSPDGNRYSGA 642
Query: 653 SCQVLESETYKC 688
C++ + KC
Sbjct: 643 KCEICPTCPTKC 654
>U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile
(unfertilizable) protein2 protein.
Length = 548
Score = 29.1 bits (62), Expect = 4.5
Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 3/79 (3%)
Frame = +2
Query: 464 CDFCEAWVCHGRKCLTSHACTCPLMDAVCLECERGVWEHGGRVFRCC-FCQGFL-CEDDQ 637
C +A + KC C ++ C +C++G + G + C G C+D
Sbjct: 223 CSGSDACLPISVKCDGVSDCENESDESNCNKCQKGAHKCGKNCIKASKVCDGIPDCDDGS 282
Query: 638 FEHQASCQVLE-SETYKCQ 691
EHQ C+ SE C+
Sbjct: 283 DEHQCDCKTCSGSEKALCE 301
>AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical
protein K09F6.9 protein.
Length = 609
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/50 (26%), Positives = 30/50 (60%)
Frame = +2
Query: 170 KKKTGQRKKAEKQKLRQKEIRAAREHVDLAQHPCNVAMECDKCQKKQKTR 319
KK +KKAE+ + ++++ + A +A+H A+E +K ++++K +
Sbjct: 208 KKYIETQKKAEENEEKRRDAQKAERDAHIARHKQAEALEKEKREQEEKMK 257
>U23520-5|AAC46554.4| 975|Caenorhabditis elegans Mammalian vav
(oncogene) relatedprotein 1, isoform a protein.
Length = 975
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 665 LESETYKCQSCNRIGQYSCLRCKTC 739
L+ + YKC+SCN CL K C
Sbjct: 606 LQYQGYKCESCNMSMHKECLGLKKC 630
>U23520-4|ABB88236.1| 1007|Caenorhabditis elegans Mammalian vav
(oncogene) relatedprotein 1, isoform b protein.
Length = 1007
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 665 LESETYKCQSCNRIGQYSCLRCKTC 739
L+ + YKC+SCN CL K C
Sbjct: 638 LQYQGYKCESCNMSMHKECLGLKKC 662
>DQ136172-1|AAZ66767.1| 1007|Caenorhabditis elegans VAV-1 protein.
Length = 1007
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 665 LESETYKCQSCNRIGQYSCLRCKTC 739
L+ + YKC+SCN CL K C
Sbjct: 638 LQYQGYKCESCNMSMHKECLGLKKC 662
>Z68297-2|CAA92594.3| 522|Caenorhabditis elegans Hypothetical
protein F11A10.3 protein.
Length = 522
Score = 28.3 bits (60), Expect = 7.9
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = +2
Query: 158 KNMP---KKKTGQRKKAEKQKLRQKEIRAAREHVDLAQHP-CNVAMECDKCQKKQKTR 319
+N+P KKK + + AE+ KLR++ R AR + P + + K +KK++ R
Sbjct: 188 RNLPPKRKKKPVEEETAEEIKLRERAERKARRIEEAKNRPKLTIEQKLAKLRKKKERR 245
>AL021503-6|CAA16424.2| 459|Caenorhabditis elegans Hypothetical
protein Y68A4A.10a protein.
Length = 459
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/66 (25%), Positives = 23/66 (34%), Gaps = 1/66 (1%)
Frame = +2
Query: 335 CQAVQRLPTCAHCGK-VKCMLKSGDCVIRHPGVYNTGMGMVGAICDFCEAWVCHGRKCLT 511
C V +P C C M G C G+ +TG + C + C KC+T
Sbjct: 235 CNDVALIPPCQTCTPFTDPMSDKGTCTAT-TGMTSTGCSTLAVKCTINAGFECDVAKCMT 293
Query: 512 SHACTC 529
C
Sbjct: 294 DPGFEC 299
>AL021497-11|CAA16401.1| 54|Caenorhabditis elegans Hypothetical
protein Y51A2D.14 protein.
Length = 54
Score = 28.3 bits (60), Expect = 7.9
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 326 CYFCQAVQRLPTCAHCGKVKCMLKSGDCV 412
CYF ++ + TC +C C+ +GDCV
Sbjct: 24 CYFSDSICKSITCRNCKVATCI--TGDCV 50
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,657,268
Number of Sequences: 27780
Number of extensions: 482288
Number of successful extensions: 1826
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1813
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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