Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_L08
         (940 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001461-1|AAN71216.1|   56|Drosophila melanogaster GM20929p pro...    62   8e-10
AE013599-856|AAZ52820.1|   40|Drosophila melanogaster CG33774-PA...    60   3e-09
AY089614-1|AAL90352.1|  417|Drosophila melanogaster RE28792p pro...    30   5.3  
AY060989-1|AAL28537.1|  222|Drosophila melanogaster GM14833p pro...    30   5.3  
AE014297-2366|AAF55430.3|  787|Drosophila melanogaster CG5836-PA...    30   5.3  

>BT001461-1|AAN71216.1|   56|Drosophila melanogaster GM20929p
           protein.
          Length = 56

 Score = 62.5 bits (145), Expect = 8e-10
 Identities = 26/35 (74%), Positives = 32/35 (91%)
 Frame = +3

Query: 129 KMITDIQLAVFSNILGVSIFLLVILYHYINANSSK 233
           KMITD+QLA+FSN+LGV +FLLV+ YHYINAN+ K
Sbjct: 16  KMITDVQLAIFSNVLGVFLFLLVVAYHYINANTGK 50


>AE013599-856|AAZ52820.1|   40|Drosophila melanogaster CG33774-PA
           protein.
          Length = 40

 Score = 60.5 bits (140), Expect = 3e-09
 Identities = 25/34 (73%), Positives = 31/34 (91%)
 Frame = +3

Query: 132 MITDIQLAVFSNILGVSIFLLVILYHYINANSSK 233
           MITD+QLA+FSN+LGV +FLLV+ YHYINAN+ K
Sbjct: 1   MITDVQLAIFSNVLGVFLFLLVVAYHYINANTGK 34


>AY089614-1|AAL90352.1|  417|Drosophila melanogaster RE28792p
           protein.
          Length = 417

 Score = 29.9 bits (64), Expect = 5.3
 Identities = 20/62 (32%), Positives = 22/62 (35%)
 Frame = -3

Query: 806 PXXPPXXGXXKPXXPXPXXXGXXGFFXGGXXXGGPXKXXPPFPRXVGGFXLXXXKPPPTX 627
           P  PP  G   P  P P   G    + GG     P    PP P       L   +PPP  
Sbjct: 361 PLIPPPPGTSAPPMP-PWGGGAYSGWGGGYAPPPPPPCAPPPPA------LSLSQPPPPP 413

Query: 626 PP 621
           PP
Sbjct: 414 PP 415


>AY060989-1|AAL28537.1|  222|Drosophila melanogaster GM14833p
           protein.
          Length = 222

 Score = 29.9 bits (64), Expect = 5.3
 Identities = 20/62 (32%), Positives = 22/62 (35%)
 Frame = -3

Query: 806 PXXPPXXGXXKPXXPXPXXXGXXGFFXGGXXXGGPXKXXPPFPRXVGGFXLXXXKPPPTX 627
           P  PP  G   P  P P   G    + GG     P    PP P       L   +PPP  
Sbjct: 166 PLIPPPPGTSAPPMP-PWGGGAYSGWGGGYAPPPPPPCAPPPPA------LSLSQPPPPP 218

Query: 626 PP 621
           PP
Sbjct: 219 PP 220


>AE014297-2366|AAF55430.3|  787|Drosophila melanogaster CG5836-PA
           protein.
          Length = 787

 Score = 29.9 bits (64), Expect = 5.3
 Identities = 20/62 (32%), Positives = 22/62 (35%)
 Frame = -3

Query: 806 PXXPPXXGXXKPXXPXPXXXGXXGFFXGGXXXGGPXKXXPPFPRXVGGFXLXXXKPPPTX 627
           P  PP  G   P  P P   G    + GG     P    PP P       L   +PPP  
Sbjct: 731 PLIPPPPGTSAPPMP-PWGGGAYSGWGGGYAPPPPPPCAPPPPA------LSLSQPPPPP 783

Query: 626 PP 621
           PP
Sbjct: 784 PP 785


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,906,738
Number of Sequences: 53049
Number of extensions: 440836
Number of successful extensions: 784
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 550
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 758
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4648779081
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)