Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_L06
(902 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0444 + 3357048-3357425,3357841-3357969,3358165-3358284,335... 175 1e-44
03_05_0654 + 26479416-26479605,26480058-26480246,26480674-264809... 36 0.044
01_06_1610 - 38625427-38625726,38625814-38625885,38626001-386261... 35 0.077
06_01_0309 - 2233573-2234556,2234670-2234721,2235406-2236391,223... 31 0.95
02_01_0509 + 3694689-3695683,3695799-3695946,3696864-3696943,369... 30 2.2
01_06_1086 - 34421837-34422311,34422426-34422612,34423162-344232... 30 2.2
11_02_0055 - 7819391-7820098,7820202-7820534,7820930-7821103 30 2.9
03_06_0647 - 35267177-35267323,35267461-35267547,35268319-352684... 30 2.9
07_03_1287 + 25510813-25510862,25511326-25511504,25511715-255120... 29 3.8
01_06_1087 - 34430521-34430899,34432336-34432806,34432926-344331... 29 3.8
04_03_0435 + 15902356-15902574,15902680-15902777,15905100-159051... 29 6.7
01_06_1571 - 38314952-38315089,38315958-38315987,38316107-383162... 29 6.7
06_03_0181 + 17618888-17619125,17621503-17621683,17621765-176219... 28 8.8
>07_01_0444 +
3357048-3357425,3357841-3357969,3358165-3358284,
3358661-3358753,3358935-3359014,3359180-3359293,
3359530-3359603,3359757-3359833,3360558-3360641,
3360732-3360824,3360901-3361008,3361130-3361204,
3361507-3361911
Length = 609
Score = 175 bits (426), Expect(2) = 1e-44
Identities = 75/113 (66%), Positives = 97/113 (85%)
Frame = +2
Query: 554 QVMDPRTKMILFKLLNRGIINEINGCISTGKEANVYHATSKDGRDFAIKIFKTSILVFKD 733
+ +DPRT+M+LFK+LNRG+ N INGCISTGKEANVYHA+ DG++ AIK++KTS+LVFKD
Sbjct: 209 KAIDPRTRMVLFKMLNRGVFNTINGCISTGKEANVYHASKADGQELAIKVYKTSVLVFKD 268
Query: 734 RDKYVSGEYRFRNGYCRSNPRKMVRTWAEKEMRNLVRLYNAQLNVPXFILDRV 892
RD+YV G+YRFR+GYC+ NPRKMV+TWAEKEMRNL+R+ A + P +L R+
Sbjct: 269 RDRYVHGDYRFRHGYCKHNPRKMVKTWAEKEMRNLLRVGAAGIRCPKPLLLRL 321
Score = 23.4 bits (48), Expect(2) = 1e-44
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 455 MSNNTEKFIDQNDRKKDNERIRIKDKHDRATAEQV 559
MSN+ I + R+ + R +K DRAT EQ+
Sbjct: 136 MSNSVTTAIRDSIRETAIGKTRNTEKADRATVEQL 170
>03_05_0654 +
26479416-26479605,26480058-26480246,26480674-26480989,
26481286-26481844
Length = 417
Score = 35.9 bits (79), Expect = 0.044
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Frame = +2
Query: 302 YFLDSDDPTQGTKKKDNFNSQ---APTTKLTSYQPTEKLFKRYINKINVDKY------EP 454
Y+ DS + T K+K N ++ P LT+ QPT LF + + +K+ E
Sbjct: 225 YWTDSLNRTMANKEKGNKAAEENNGPLLNLTNQQPTLSLFSQLKQQNKPEKFNTAGDSES 284
Query: 455 MSNNTEKFIDQNDRKKDNERIRIKDKHDRATAEQVM 562
+S+NT ++ +++N+ I HDR + V+
Sbjct: 285 ISSNTMLKPWESSNQQNNKSIPFTKMHDRGCLQSVL 320
>01_06_1610 -
38625427-38625726,38625814-38625885,38626001-38626117,
38626509-38626674,38626768-38626815,38626889-38626962,
38627126-38627243,38627332-38627420,38627512-38627687,
38627785-38627898,38627981-38628051,38628431-38628477,
38628581-38628721,38629095-38629136
Length = 524
Score = 35.1 bits (77), Expect = 0.077
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +2
Query: 593 LLNRGIINEINGCISTGKEANVYHATSKDGRDFAIKIF---KTSILVFKDRDKYVSGEYR 763
L+NRG+ + I GKE++++ ++DG A+K+ +TS K + Y++
Sbjct: 119 LVNRGVFASVGRQIGVGKESDIFEVATEDGTVLAMKLHRLGRTSFRAVKSKRDYLAHRRS 178
Query: 764 F 766
F
Sbjct: 179 F 179
>06_01_0309 -
2233573-2234556,2234670-2234721,2235406-2236391,
2237790-2238050
Length = 760
Score = 31.5 bits (68), Expect = 0.95
Identities = 21/92 (22%), Positives = 42/92 (45%)
Frame = +2
Query: 449 EPMSNNTEKFIDQNDRKKDNERIRIKDKHDRATAEQVMDPRTKMILFKLLNRGIINEING 628
E ++ ++Q+D +K ++ R+ ++HD + V D + I ++ ++I G
Sbjct: 344 EETGTKRKRLLEQHDAEKSDDVSRLLEQHDAENIDDVSDSSVECITGWEISP---DKIVG 400
Query: 629 CISTGKEANVYHATSKDGRDFAIKIFKTSILV 724
I T A R FA+++F+ LV
Sbjct: 401 AIGTKHFWKARRAIMNQQRVFAVQVFELHKLV 432
>02_01_0509 +
3694689-3695683,3695799-3695946,3696864-3696943,
3697214-3698062,3698193-3698337,3698426-3698677,
3698780-3699089,3699415-3699524
Length = 962
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = +2
Query: 524 KDKHDRATAEQVMDPRTKMILFKLLNRG---IINEINGCISTG 643
KDK R E++++ R K + LLN G + ++ CIS G
Sbjct: 817 KDKSARVEEEKIVEERLKKLALMLLNSGNKKFLTALSNCISDG 859
>01_06_1086 -
34421837-34422311,34422426-34422612,34423162-34423291,
34423485-34423720,34423804-34423961,34424048-34424128,
34424216-34424281,34424364-34424432,34424722-34424866,
34425645-34426138,34426244-34426811,34429529-34429574
Length = 884
Score = 30.3 bits (65), Expect = 2.2
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = +2
Query: 527 DKHDRATAEQVMDPRTKMILFKLLNRGIINEINGCISTGKEANVYHATSKDGRDFAIKIF 706
D +D E + T+ + L R I N I G VYH +G + A+K+
Sbjct: 549 DDYDMYEEENPLHSDTRRFTYTEL-RTITNNFQSIIGNGGFGTVYHGILGNGEEVAVKVL 607
Query: 707 K-TSILVFKD 733
+ TS + KD
Sbjct: 608 RETSRALSKD 617
>11_02_0055 - 7819391-7820098,7820202-7820534,7820930-7821103
Length = 404
Score = 29.9 bits (64), Expect = 2.9
Identities = 18/65 (27%), Positives = 32/65 (49%)
Frame = +2
Query: 401 EKLFKRYINKINVDKYEPMSNNTEKFIDQNDRKKDNERIRIKDKHDRATAEQVMDPRTKM 580
EK + Y+ KIN +KY+ +++N ++ D K IR K D + +++ +
Sbjct: 277 EKKWSTYLKKINKEKYKSITSNPTHVVNVEDAPK-LRPIRHKKAKDERSGKRLASEAISV 335
Query: 581 ILFKL 595
I KL
Sbjct: 336 IDQKL 340
>03_06_0647 -
35267177-35267323,35267461-35267547,35268319-35268451,
35268571-35268620,35269131-35269202,35269782-35270004,
35270331-35270604,35270687-35270813,35270942-35271189,
35271682-35271772
Length = 483
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +2
Query: 623 NGCISTGKEANVYHATSKDGRDFAIK 700
N I G VYHAT DGR A+K
Sbjct: 72 NALIGEGSYGRVYHATLDDGRQAAVK 97
>07_03_1287 +
25510813-25510862,25511326-25511504,25511715-25512037,
25512160-25513950
Length = 780
Score = 29.5 bits (63), Expect = 3.8
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Frame = +2
Query: 449 EPMSNNTEKF-IDQNDRKKDNER--IRIKDKHDRATAEQVMDPRTKMILFKLLNRGIINE 619
E + +N EK +++ K+D+E +R ++ E + +T++ + K + I E
Sbjct: 229 EELKHNLEKAQVEEVQAKQDSELALLRAQEIEQGVADEASVIAKTQIEVAKERHEKAIAE 288
Query: 620 INGCISTGKEANVYHATSKDGRDFAIKIFKTSILVFKDRDKYV 748
+N K + + T + RD AIK + I V KD +K V
Sbjct: 289 LNSVKEELKTVHEQYVTLINERDTAIKRSEEVISVGKDIEKRV 331
>01_06_1087 -
34430521-34430899,34432336-34432806,34432926-34433112,
34433470-34433599,34433794-34434125,34434566-34435050,
34435185-34435752,34436579-34436640,34437569-34437636
Length = 893
Score = 29.5 bits (63), Expect = 3.8
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +2
Query: 527 DKHDRATAEQVMDPRTKMILFKLLNRGIINEINGCISTGKEANVYHATSKDGRDFAIKIF 706
D +D + + T+ + L + I N I G VYH +G + A+K+
Sbjct: 433 DDYDMYEEDTPLHTDTRRFTYTEL-KTITNNFQSIIGKGGFGMVYHGILDNGEEVAVKVL 491
Query: 707 K-TSILVFKD 733
+ TSI + KD
Sbjct: 492 RETSITLSKD 501
>04_03_0435 +
15902356-15902574,15902680-15902777,15905100-15905163,
15906707-15907045
Length = 239
Score = 28.7 bits (61), Expect = 6.7
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2
Query: 323 PTQGTKKKDNFNSQ--APTTKLTSYQPTEKLFKRYINKINVDKYEPMSNNT 469
P GT K +NFN A + KLT + E + Y + ++ D+Y M NT
Sbjct: 175 PIPGTTKIENFNQNVAALSVKLTPAEMAE--LESYASNVHGDRYPLMMANT 223
>01_06_1571 -
38314952-38315089,38315958-38315987,38316107-38316206,
38316322-38316383,38316465-38316531,38316889-38317076
Length = 194
Score = 28.7 bits (61), Expect = 6.7
Identities = 18/82 (21%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = +2
Query: 377 KLTSYQPTEKLFKRYINKINVDKYEPMSNNTEKFIDQN-DR-KKDNERIRIKDKHDRATA 550
KL Y + R + K + + + + K + DR KK+N+ ++I+ +H +
Sbjct: 53 KLYDYCSPKTSLSRILEKYQTNSGKILWDEKHKSLSAEIDRIKKENDNMQIELRHLKGED 112
Query: 551 EQVMDPRTKMILFKLLNRGIIN 616
+ P+ +++ + L+ GI+N
Sbjct: 113 LNSLQPKELIMIEEALDNGIVN 134
>06_03_0181 +
17618888-17619125,17621503-17621683,17621765-17621906,
17622002-17622071,17622162-17622307,17623382-17623948,
17624558-17624641,17624723-17624797,17625049-17625217,
17625395-17625586,17625662-17626053
Length = 751
Score = 28.3 bits (60), Expect = 8.8
Identities = 15/67 (22%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +2
Query: 344 KDNFNSQAPTTKLTSY-QPTEKLFKRYINKINVDKYEPMSNNTEKFIDQNDRKKDNERIR 520
K++ + P + Y +++F N++ DK M N ++ + ++KKD+E R
Sbjct: 476 KNHAELKKPKNGMPKYLDELDRMFMGVHNELQKDKVAAMDN----YLGRREKKKDDEMAR 531
Query: 521 IKDKHDR 541
+++ +R
Sbjct: 532 VREVAER 538
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,878,971
Number of Sequences: 37544
Number of extensions: 360353
Number of successful extensions: 917
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 917
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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