Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_L04
         (909 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000F1E7A9 Cluster: PREDICTED: similar to type IV co...    34   4.4  
UniRef50_Q8W5K6 Cluster: Putative uncharacterized protein OSJNBa...    34   5.8  
UniRef50_UPI0000D55A89 Cluster: PREDICTED: hypothetical protein;...    33   7.6  
UniRef50_A4QXQ3 Cluster: Putative uncharacterized protein; n=6; ...    33   7.6  

>UniRef50_UPI0000F1E7A9 Cluster: PREDICTED: similar to type IV
           collagen alpha 6 chain; n=1; Danio rerio|Rep: PREDICTED:
           similar to type IV collagen alpha 6 chain - Danio rerio
          Length = 858

 Score = 34.3 bits (75), Expect = 4.4
 Identities = 26/86 (30%), Positives = 30/86 (34%)
 Frame = -3

Query: 736 SPRFPGERVYPXWGEVXXXGXTEXPXXXXXXGPKKEXXPXXQPPFPGGXGNSXXRPXLPX 557
           +P  P ER+    GE    G    P      G K    P  +P FPG  G +     LP 
Sbjct: 489 TPPIPVERLVK--GEPGEPGIVGGPGFTGQRGDKGFPGPPGRPGFPGPPGFADQAKGLPG 546

Query: 556 XPXDPGXXXXXXXGGXXVFAGFYGXP 479
            P  PG        G   F G  G P
Sbjct: 547 QPGIPGVPGSSGFPGPKGFPGVMGFP 572


>UniRef50_Q8W5K6 Cluster: Putative uncharacterized protein
           OSJNBa0079B05.10; n=4; Oryza sativa|Rep: Putative
           uncharacterized protein OSJNBa0079B05.10 - Oryza sativa
           (Rice)
          Length = 1269

 Score = 33.9 bits (74), Expect = 5.8
 Identities = 13/21 (61%), Positives = 13/21 (61%)
 Frame = +1

Query: 796 GXXPAFSXGPPPPXXPSPPXP 858
           G  PAFS  PPPP  P PP P
Sbjct: 556 GNKPAFSPPPPPPPPPPPPLP 576


>UniRef50_UPI0000D55A89 Cluster: PREDICTED: hypothetical protein;
           n=1; Tribolium castaneum|Rep: PREDICTED: hypothetical
           protein - Tribolium castaneum
          Length = 843

 Score = 33.5 bits (73), Expect = 7.6
 Identities = 24/74 (32%), Positives = 29/74 (39%), Gaps = 6/74 (8%)
 Frame = -3

Query: 742 GGSPRFPGERVYPXWGEVXXXGXTEXPXXXXXXGPKKEXXPXXQPPFPGGX------GNS 581
           GG+P FPGE+ Y   G     G    P       P     P  +P +PGG       G  
Sbjct: 33  GGTPEFPGEQ-YRKPGRPSIPGYPAEPGGRPGV-PGYPRGPEERPGYPGGPAVPGYPGLP 90

Query: 580 XXRPXLPXXPXDPG 539
             RP +P  P  PG
Sbjct: 91  GGRPGIPEYPGAPG 104


>UniRef50_A4QXQ3 Cluster: Putative uncharacterized protein; n=6;
           Fungi/Metazoa group|Rep: Putative uncharacterized
           protein - Magnaporthe grisea (Rice blast fungus)
           (Pyricularia grisea)
          Length = 671

 Score = 33.5 bits (73), Expect = 7.6
 Identities = 28/96 (29%), Positives = 33/96 (34%), Gaps = 1/96 (1%)
 Frame = -3

Query: 739 GSPRFPGERVYPXW-GEVXXXGXTEXPXXXXXXGPKKEXXPXXQPPFPGGXGNSXXRPXL 563
           G P +PG   YP + G     G    P       P     P   P FPGG G+    P  
Sbjct: 344 GGPGYPGGPGYPGFPGGPGYPGGPGYPGFPGG--PGYPGGPGY-PGFPGGPGHPGG-PGY 399

Query: 562 PXXPXDPGXXXXXXXGGXXVFAGFYGXPXXXXXPXF 455
           P  P  PG        G   + GF G P     P +
Sbjct: 400 PGGPGYPGFPGGPGYPGGPGYPGFPGGPGYPGGPGY 435


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.315    0.143    0.494 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 527,291,220
Number of Sequences: 1657284
Number of extensions: 7722098
Number of successful extensions: 26463
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23215
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 82801539422
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)