Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_L02
(890 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0873 - 32372143-32372287,32372678-32372754,32372863-323730... 110 1e-24
07_03_1385 + 26189034-26189294,26189427-26189636,26191016-261910... 91 8e-19
03_03_0128 - 14677152-14677296,14677381-14677457,14679836-14680312 82 5e-16
09_04_0359 + 16941904-16942110,16943636-16943785,16944084-169442... 78 8e-15
09_04_0676 - 19383757-19383890,19384308-19384415,19384493-193846... 40 0.002
06_03_1058 + 27254195-27254382,27255041-27255116,27255254-272554... 30 2.1
03_03_0008 - 13674602-13674708,13675272-13675439,13676169-136767... 30 2.1
04_01_0500 - 6540769-6541482,6541819-6541877,6541965-6542064,654... 29 3.8
03_05_1132 - 30609569-30609721,30610113-30610204,30610302-306104... 29 3.8
12_01_0223 + 1708420-1708512,1708790-1709008,1709117-1709330,170... 28 8.7
01_05_0184 + 19005991-19006129,19006523-19006692,19007408-19007659 28 8.7
>02_05_0873 -
32372143-32372287,32372678-32372754,32372863-32373072,
32374645-32374869
Length = 218
Score = 110 bits (265), Expect = 1e-24
Identities = 64/217 (29%), Positives = 112/217 (51%)
Frame = +3
Query: 90 MELIKLSSLLVIALLADCASALYFHIAEGERKCFIEEIPDDTTVIVNYKVELYDPKSGGF 269
+ L ++++ A L CA A++ + + KC EEI + V+ +Y + +Y+
Sbjct: 11 LTLAVAAAVIAAACLLLCAEAVWLDLPQSGTKCVSEEIQSNVVVLADYAL-MYESHPSSH 69
Query: 270 MQTTPGIGMHVEVRDPNDRILLSRVYSLEGMISFTSSTPGEHVICMYSNSTSWFSGSQLR 449
P I V+V P L + G +FT+S G ++ C + +S GS +
Sbjct: 70 ----PTIA--VKVTSPYGNTLHHNENATVGQFAFTTSEAGNYLACFWIDSAE--KGSGIS 121
Query: 450 VHLDIQVGEHAVDYANVAQKEKLTELQLRIRQLLDQVHQITKEQAYQRQREERFRQTSES 629
++LD ++G A D+ +A+KEK+ ++L +R+L V I + Y + RE R SE
Sbjct: 122 INLDWKIGIAAKDWDVIAKKEKIEGVELELRKLEVAVQSIHQNMIYLKAREAEMRTVSEK 181
Query: 630 TNQRVLWWSLLQTGVLVIIGYWQMRHLKSFFEAKKLV 740
TN RV W+S+L V +++ Q+ HL+ +F+ KKL+
Sbjct: 182 TNARVAWFSILSLSVCIVVSILQLWHLQGYFQKKKLI 218
>07_03_1385 +
26189034-26189294,26189427-26189636,26191016-26191092,
26191196-26191340
Length = 230
Score = 91.5 bits (217), Expect = 8e-19
Identities = 58/210 (27%), Positives = 104/210 (49%), Gaps = 1/210 (0%)
Frame = +3
Query: 114 LLVIALLADCASALYFHIAEGERKCFIEEIPDDTTVIVNYKVELYDPK-SGGFMQTTPGI 290
LL+++ A AL F + G KC +EI ++ V+ Y V DP + + I
Sbjct: 25 LLLLSAAPRTARALRFDLESGHTKCISDEIKVNSMVVGKYHVVGPDPNFPDNPLPDSHRI 84
Query: 291 GMHVEVRDPNDRILLSRVYSLEGMISFTSSTPGEHVICMYSNSTSWFSGSQLRVHLDIQV 470
+ V N V S G +FT++ G+++ C ++ + D +
Sbjct: 85 SLRVTSPYGNSVHYAENVPS--GNFAFTATEAGDYLACFWAPDHK--PPVSIGFEFDWRS 140
Query: 471 GEHAVDYANVAQKEKLTELQLRIRQLLDQVHQITKEQAYQRQREERFRQTSESTNQRVLW 650
G A D++NVA+K ++ +++ +++L + + I +E Y R+REE + ++ TN R+ W
Sbjct: 141 GVAAKDWSNVAKKGQVDVMEMELKKLEETIKSIHEEMFYLREREEEMQNLNKQTNSRMAW 200
Query: 651 WSLLQTGVLVIIGYWQMRHLKSFFEAKKLV 740
L G+ + + Q+ HLK+FFE KKL+
Sbjct: 201 LGFLSLGICLSVAGLQLWHLKTFFERKKLL 230
>03_03_0128 - 14677152-14677296,14677381-14677457,14679836-14680312
Length = 232
Score = 82.2 bits (194), Expect = 5e-16
Identities = 54/211 (25%), Positives = 98/211 (46%), Gaps = 12/211 (5%)
Frame = +3
Query: 144 ASALYFHIAEGERKCFIEEIPDDTTVIVNYKVELYDPKSGGFMQTTPGIGMHVEVRDPND 323
A+AL F + G KC ++I + Y V + P+ GG ++ + P
Sbjct: 26 AAALRFDLQSGHTKCISDDIKVGAMAVGKYHVVV--PEGGGSTSSSSSSSSSAQPLLPES 83
Query: 324 RILLSRVYS------------LEGMISFTSSTPGEHVICMYSNSTSWFSGSQLRVHLDIQ 467
+ RV S G +FT+S G+++ C ++ + + D +
Sbjct: 84 HRVSLRVTSPYGNSLHYSENVQSGNFAFTASEAGDYLACFWAPDHR--PTATVGFEFDWR 141
Query: 468 VGEHAVDYANVAQKEKLTELQLRIRQLLDQVHQITKEQAYQRQREERFRQTSESTNQRVL 647
G A D+ NVA+K ++ +++ +++L D ++ I +E Y R REE ++ + TN R+
Sbjct: 142 SGVSARDWTNVAKKGQVDMMEVELKKLEDTINSIHEEMFYLRAREEEMQELNRRTNSRMA 201
Query: 648 WWSLLQTGVLVIIGYWQMRHLKSFFEAKKLV 740
W + + + Q+ HLK+FFE KKL+
Sbjct: 202 WLGFFSLAICLSVAGLQLWHLKNFFERKKLL 232
>09_04_0359 +
16941904-16942110,16943636-16943785,16944084-16944293,
16944376-16944452,16944554-16944698
Length = 262
Score = 78.2 bits (184), Expect = 8e-15
Identities = 45/150 (30%), Positives = 77/150 (51%)
Frame = +3
Query: 291 GMHVEVRDPNDRILLSRVYSLEGMISFTSSTPGEHVICMYSNSTSWFSGSQLRVHLDIQV 470
G +V P I+ + G SFT++ G ++ C ++ + ++++LD +V
Sbjct: 115 GTPAKVTSPFGDIVHHKQKVSTGQFSFTTAEAGNYLACFSADGRN--KRLVVKLNLDWRV 172
Query: 471 GEHAVDYANVAQKEKLTELQLRIRQLLDQVHQITKEQAYQRQREERFRQTSESTNQRVLW 650
G D+ +VA+KEKL ++L + +L V I + R +E R TSE TN R W
Sbjct: 173 GIATKDWDSVAKKEKLEGVELELVKLETSVQAIHENLLLLRSKEANMRDTSEKTNARATW 232
Query: 651 WSLLQTGVLVIIGYWQMRHLKSFFEAKKLV 740
S++ V +I+ Q+ HL+ +F KKL+
Sbjct: 233 LSIISLIVCIIVSVLQLWHLQQYFRKKKLI 262
>09_04_0676 -
19383757-19383890,19384308-19384415,19384493-19384679,
19384937-19385143
Length = 211
Score = 40.3 bits (90), Expect = 0.002
Identities = 47/212 (22%), Positives = 87/212 (41%), Gaps = 1/212 (0%)
Frame = +3
Query: 99 IKLSSLLVIALLADCASALYFHIAEGERKCFIEEIP-DDTTVIVNYKVELYDPKSGGFMQ 275
++L LLV+ +LA A +CF + + TV V++ V + +
Sbjct: 5 LRLGFLLVLCILAFLRPAAAIRFVIDREECFSHNVDYEGDTVHVSFVVIKAETP---WHY 61
Query: 276 TTPGIGMHVEVRDPNDRILLSRVYSLEGMISFTSSTPGEHVICMYSNSTSWFSGSQLRVH 455
T G+ + VRDPN + + F G H C ++N + + V
Sbjct: 62 TEDGVDL--VVRDPNGNQIHDSRDKISDKFEFIVHRRGVHRFC-FTNKSPYHE----TVD 114
Query: 456 LDIQVGEHAVDYANVAQKEKLTELQLRIRQLLDQVHQITKEQAYQRQREERFRQTSESTN 635
D+ V H Y A+ E + L +I +L + ++ I EQ + + +R +E+ +
Sbjct: 115 FDVLV-SHFSYYDQHAKDEHFSALFEQIAKLDEALYNIQFEQHWLEAQTDRQAILNENMS 173
Query: 636 QRVLWWSLLQTGVLVIIGYWQMRHLKSFFEAK 731
+R + + ++ L+ Q+ L FE K
Sbjct: 174 RRAVHKAFFESAALIAASVVQVYLLHRLFERK 205
>06_03_1058 +
27254195-27254382,27255041-27255116,27255254-27255418,
27255580-27255671,27255713-27255754,27256342-27256387,
27258456-27258683
Length = 278
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/63 (31%), Positives = 34/63 (53%)
Frame = +3
Query: 441 QLRVHLDIQVGEHAVDYANVAQKEKLTELQLRIRQLLDQVHQITKEQAYQRQREERFRQT 620
QL L Q GE D ++V+ ++L++LQL++ L +VH K++ +Q E+ R
Sbjct: 103 QLEASLRRQTGE---DLSSVSTVDELSQLQLQLESSLSKVH-ARKDELMSQQLEDMRRMV 158
Query: 621 SES 629
S
Sbjct: 159 HYS 161
>03_03_0008 -
13674602-13674708,13675272-13675439,13676169-13676787,
13676868-13677330,13677855-13678036,13678093-13678235,
13678315-13678423,13679000-13679456,13680490-13682473,
13682507-13682626,13682920-13682971
Length = 1467
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +1
Query: 559 YTRSQRSRLTRGKEKSVFDKHQKAQTSECSGGVCYRQVSLSSSVT 693
YTRS+ S L R + D + + + SGG C V L++ T
Sbjct: 159 YTRSRVSSLRRSRSSLNTDTRKAQDSGKLSGGTCLASVDLAADGT 203
>04_01_0500 -
6540769-6541482,6541819-6541877,6541965-6542064,
6542113-6542322,6542507-6542765,6544022-6544215
Length = 511
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +3
Query: 558 VHQITKEQAYQRQREERFRQTSESTNQRVLWWSLLQTGVL 677
+H+ ++Q Q+Q+++RF + N VLW S++ TGVL
Sbjct: 258 LHEQQQQQQQQQQQQQRFLIAVQ--NVLVLWDSVILTGVL 295
>03_05_1132 -
30609569-30609721,30610113-30610204,30610302-30610428,
30610534-30610705,30610958-30611007,30611093-30611243,
30611353-30611479,30611885-30612071,30612245-30612398,
30612485-30612567,30613439-30613573
Length = 476
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +1
Query: 538 LDSCWIKYTRSQRSRLTRGKEKSVFDKHQKAQTSECSGGVCYRQVSLSSSV 690
+++C TR +++L+ GKE K+ +S C G +CY + +L S +
Sbjct: 153 IEACSEFVTRYHQNQLSSGKEAG---KNLPMLSSACPGWICYAEKTLGSFI 200
>12_01_0223 +
1708420-1708512,1708790-1709008,1709117-1709330,
1709901-1710001
Length = 208
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/62 (20%), Positives = 33/62 (53%)
Frame = +3
Query: 462 IQVGEHAVDYANVAQKEKLTELQLRIRQLLDQVHQITKEQAYQRQREERFRQTSESTNQR 641
+ GEH + +N A ++ +E + +QL ++ + ++AY + E ++ E ++R
Sbjct: 66 VLTGEHKGEISNTADLDQSSEAKSDKKQLSEKDEMKSIQEAYAKAYYEAIQKRQEDEDKR 125
Query: 642 VL 647
++
Sbjct: 126 MI 127
>01_05_0184 + 19005991-19006129,19006523-19006692,19007408-19007659
Length = 186
Score = 28.3 bits (60), Expect = 8.7
Identities = 10/28 (35%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = -2
Query: 637 WFVLSDVCRKRSSLCLW*A-CSFVIWCT 557
WF + ++C K +CL+ A C +W T
Sbjct: 155 WFSVPEICEKHQVICLYCASCMLDVWYT 182
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,849,023
Number of Sequences: 37544
Number of extensions: 412942
Number of successful extensions: 1110
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1083
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1108
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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