Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_L02
         (890 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            29   0.14 
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            29   0.14 
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            27   0.58 
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            27   0.58 
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    27   0.77 
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    24   5.4  
AY028786-1|AAK32960.1|  501|Anopheles gambiae cytochrome P450 pr...    23   9.4  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 29.5 bits (63), Expect = 0.14
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +3

Query: 207  DDTTVIVNYKVELYDPKSGGFMQTTP 284
            D+ T + N+   LYDP+ G F+Q  P
Sbjct: 2636 DEETNLYNFHARLYDPELGRFLQLDP 2661


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 29.5 bits (63), Expect = 0.14
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +3

Query: 207  DDTTVIVNYKVELYDPKSGGFMQTTP 284
            D+ T + N+   LYDP+ G F+Q  P
Sbjct: 2637 DEETNLYNFHARLYDPELGRFLQLDP 2662


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 27.5 bits (58), Expect = 0.58
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +3

Query: 216  TVIVNYKVELYDPKSGGFMQTTP 284
            T + NY+  LYDP  G F Q  P
Sbjct: 2679 TGLYNYRARLYDPDIGRFYQMDP 2701


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 27.5 bits (58), Expect = 0.58
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +3

Query: 216  TVIVNYKVELYDPKSGGFMQTTP 284
            T + NY+  LYDP  G F Q  P
Sbjct: 2689 TGLYNYRARLYDPDIGRFYQMDP 2711


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 27.1 bits (57), Expect = 0.77
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = +3

Query: 504 QKEKLTELQLRIRQLLDQVHQITKEQAYQRQREERFRQTSESTNQR 641
           Q E+    QLR ++   Q  Q  ++Q  QRQ+++R +Q  +   Q+
Sbjct: 293 QGERYVPPQLRQQRQQQQHQQQQQQQQQQRQQQQRQQQRQQQQRQQ 338



 Score = 26.2 bits (55), Expect = 1.3
 Identities = 13/54 (24%), Positives = 31/54 (57%)
 Frame = +3

Query: 504 QKEKLTELQLRIRQLLDQVHQITKEQAYQRQREERFRQTSESTNQRVLWWSLLQ 665
           Q+++  + Q + +Q   Q  Q  ++Q  Q+QR+++ +Q      Q+ LW ++++
Sbjct: 187 QQQQQQQQQQQQQQQQQQQQQRQQQQQCQQQRQQQPQQQQLQQPQQQLWTTVVR 240


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 18/102 (17%), Positives = 47/102 (46%), Gaps = 5/102 (4%)
 Frame = +3

Query: 339 RVYSLEGMISFTSSTPGEHVICMYSNSTSWFS-----GSQLRVHLDIQVGEHAVDYANVA 503
           R+ + E +++ T ST   +   + S    + +     G+  R   D+Q  + A++     
Sbjct: 348 RIRNREALVAKTDSTIDTYRADIESKKQEYVALKEAYGTVRRTLQDVQAKQAAIERGMRN 407

Query: 504 QKEKLTELQLRIRQLLDQVHQITKEQAYQRQREERFRQTSES 629
             E++T +Q   RQ+   + +  ++   Q ++ ++  +T ++
Sbjct: 408 ASERVTRIQKDARQIEQDLQERNRDGLSQVEQRKQAVETEKA 449


>AY028786-1|AAK32960.1|  501|Anopheles gambiae cytochrome P450
           protein.
          Length = 501

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +1

Query: 253 RNLADSCKQHRA*ACTLKSAIRMIEYCCLESIR 351
           +N+ D  KQH +        ++ IE C  ES+R
Sbjct: 334 QNITDVMKQHSSITYEAVHEMKYIEMCINESMR 366


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 851,896
Number of Sequences: 2352
Number of extensions: 17378
Number of successful extensions: 35
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95920632
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)