Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_L01
(923 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 38 0.010
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 38 0.010
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 38 0.010
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 35 0.094
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.50
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.50
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.50
Z71264-1|CAA95828.1| 998|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.2
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.2
AC006666-4|AAK21415.1| 109|Caenorhabditis elegans Hypothetical ... 31 1.5
Z83114-7|CAJ76943.1| 525|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z83114-6|CAB63235.1| 589|Caenorhabditis elegans Hypothetical pr... 30 2.0
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 30 2.0
AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical ... 30 2.0
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 30 2.0
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 30 2.0
AC006708-23|AAF60414.1| 975|Caenorhabditis elegans Paz/piwi dom... 30 2.7
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 29 3.6
AL033514-8|CAA22097.2| 715|Caenorhabditis elegans Hypothetical ... 29 3.6
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 3.6
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z29561-4|CAD91697.1| 498|Caenorhabditis elegans Hypothetical pr... 29 4.7
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 4.7
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 29 4.7
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 29 4.7
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 29 4.7
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 4.7
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 25 5.5
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 6.2
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 29 6.2
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 29 6.2
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 29 6.2
AL117203-6|CAB60419.1| 234|Caenorhabditis elegans Hypothetical ... 29 6.2
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z82062-2|CAB04890.1| 489|Caenorhabditis elegans Hypothetical pr... 28 8.2
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 28 8.2
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 28 8.2
U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death abno... 28 8.2
AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate ada... 28 8.2
AF043700-5|AAB97575.2| 573|Caenorhabditis elegans Lipid deplete... 28 8.2
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 28 8.2
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 37.9 bits (84), Expect = 0.010
Identities = 20/54 (37%), Positives = 23/54 (42%)
Frame = +1
Query: 706 PPPPXTSLXKIRPSXSKGGQTPXGXIKXXAVSPXGXPPXAPPPXPQPXPXTGIP 867
P PP T + PS S GG + I P G PP P P P P G+P
Sbjct: 684 PLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPG-GLP 736
Score = 33.5 bits (73), Expect = 0.22
Identities = 21/62 (33%), Positives = 22/62 (35%), Gaps = 4/62 (6%)
Frame = +1
Query: 709 PPPXTSLXKIR----PSXSKGGQTPXGXIKXXAVSPXGXPPXAPPPXPQPXPXTGIPVXP 876
PPP L I P GG P P G PP + P P P P G P P
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Query: 877 FP 882
P
Sbjct: 773 PP 774
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/63 (34%), Positives = 22/63 (34%), Gaps = 4/63 (6%)
Frame = +1
Query: 706 PPPPXTSLXKIR----PSXSKGGQTPXGXIKXXAVSPXGXPPXAPPPXPQPXPXTGIPVX 873
PPPP L I P GG P P G P PPP P P G P
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP-PPPPPPPPGGFKGGPPP 786
Query: 874 PFP 882
P P
Sbjct: 787 PPP 789
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 37.9 bits (84), Expect = 0.010
Identities = 20/54 (37%), Positives = 23/54 (42%)
Frame = +1
Query: 706 PPPPXTSLXKIRPSXSKGGQTPXGXIKXXAVSPXGXPPXAPPPXPQPXPXTGIP 867
P PP T + PS S GG + I P G PP P P P P G+P
Sbjct: 684 PLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPG-GLP 736
Score = 33.5 bits (73), Expect = 0.22
Identities = 21/62 (33%), Positives = 22/62 (35%), Gaps = 4/62 (6%)
Frame = +1
Query: 709 PPPXTSLXKIR----PSXSKGGQTPXGXIKXXAVSPXGXPPXAPPPXPQPXPXTGIPVXP 876
PPP L I P GG P P G PP + P P P P G P P
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Query: 877 FP 882
P
Sbjct: 773 PP 774
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/63 (34%), Positives = 22/63 (34%), Gaps = 4/63 (6%)
Frame = +1
Query: 706 PPPPXTSLXKIR----PSXSKGGQTPXGXIKXXAVSPXGXPPXAPPPXPQPXPXTGIPVX 873
PPPP L I P GG P P G P PPP P P G P
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP-PPPPPPPPGGFKGGPPP 786
Query: 874 PFP 882
P P
Sbjct: 787 PPP 789
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 37.9 bits (84), Expect = 0.010
Identities = 20/54 (37%), Positives = 23/54 (42%)
Frame = +1
Query: 706 PPPPXTSLXKIRPSXSKGGQTPXGXIKXXAVSPXGXPPXAPPPXPQPXPXTGIP 867
P PP T + PS S GG + I P G PP P P P P G+P
Sbjct: 267 PLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPG-GLP 319
Score = 33.5 bits (73), Expect = 0.22
Identities = 21/62 (33%), Positives = 22/62 (35%), Gaps = 4/62 (6%)
Frame = +1
Query: 709 PPPXTSLXKIR----PSXSKGGQTPXGXIKXXAVSPXGXPPXAPPPXPQPXPXTGIPVXP 876
PPP L I P GG P P G PP + P P P P G P P
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 355
Query: 877 FP 882
P
Sbjct: 356 PP 357
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/63 (34%), Positives = 22/63 (34%), Gaps = 4/63 (6%)
Frame = +1
Query: 706 PPPPXTSLXKIR----PSXSKGGQTPXGXIKXXAVSPXGXPPXAPPPXPQPXPXTGIPVX 873
PPPP L I P GG P P G P PPP P P G P
Sbjct: 311 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP-PPPPPPPPGGFKGGPPP 369
Query: 874 PFP 882
P P
Sbjct: 370 PPP 372
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 34.7 bits (76), Expect = 0.094
Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +1
Query: 706 PPPPXTSLXKIRPSXSKGGQTPXGXIKXXAV-SPXGXPPXAPPPXPQPXPXT 858
PPPP K+ PS TP + + SP PP PPP P P P T
Sbjct: 324 PPPPPPM--KLDPSPQPAA-TPVEITEIPPIISPPAPPPPPPPPPPPPPPQT 372
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 32.3 bits (70), Expect = 0.50
Identities = 22/70 (31%), Positives = 23/70 (32%), Gaps = 5/70 (7%)
Frame = +1
Query: 697 SQRPPPPXTSLXKIRPSXSK-----GGQTPXGXIKXXAVSPXGXPPXAPPPXPQPXPXTG 861
S PPPP + S S G P P G PP P P P G
Sbjct: 236 SPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG 295
Query: 862 IPVXPFPLRG 891
P P P RG
Sbjct: 296 SPPPPPPPRG 305
Score = 29.9 bits (64), Expect = 2.7
Identities = 21/78 (26%), Positives = 23/78 (29%)
Frame = +1
Query: 649 PXKGQXPVKXPGXWXFSQRPPPPXTSLXKIRPSXSKGGQTPXGXIKXXAVSPXGXPPXAP 828
P KG P+ G PPPP + P P G PP A
Sbjct: 242 PPKGSPPLAGSGS------PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG 295
Query: 829 PPXPQPXPXTGIPVXPFP 882
P P P P P P
Sbjct: 296 SPPPPPPPRGSPPTGSLP 313
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 32.3 bits (70), Expect = 0.50
Identities = 22/70 (31%), Positives = 23/70 (32%), Gaps = 5/70 (7%)
Frame = +1
Query: 697 SQRPPPPXTSLXKIRPSXSK-----GGQTPXGXIKXXAVSPXGXPPXAPPPXPQPXPXTG 861
S PPPP + S S G P P G PP P P P G
Sbjct: 257 SPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG 316
Query: 862 IPVXPFPLRG 891
P P P RG
Sbjct: 317 SPPPPPPPRG 326
Score = 29.9 bits (64), Expect = 2.7
Identities = 21/78 (26%), Positives = 23/78 (29%)
Frame = +1
Query: 649 PXKGQXPVKXPGXWXFSQRPPPPXTSLXKIRPSXSKGGQTPXGXIKXXAVSPXGXPPXAP 828
P KG P+ G PPPP + P P G PP A
Sbjct: 263 PPKGSPPLAGSGS------PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG 316
Query: 829 PPXPQPXPXTGIPVXPFP 882
P P P P P P
Sbjct: 317 SPPPPPPPRGSPPTGSLP 334
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 32.3 bits (70), Expect = 0.50
Identities = 22/70 (31%), Positives = 23/70 (32%), Gaps = 5/70 (7%)
Frame = +1
Query: 697 SQRPPPPXTSLXKIRPSXSK-----GGQTPXGXIKXXAVSPXGXPPXAPPPXPQPXPXTG 861
S PPPP + S S G P P G PP P P P G
Sbjct: 242 SPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG 301
Query: 862 IPVXPFPLRG 891
P P P RG
Sbjct: 302 SPPPPPPPRG 311
Score = 29.9 bits (64), Expect = 2.7
Identities = 21/78 (26%), Positives = 23/78 (29%)
Frame = +1
Query: 649 PXKGQXPVKXPGXWXFSQRPPPPXTSLXKIRPSXSKGGQTPXGXIKXXAVSPXGXPPXAP 828
P KG P+ G PPPP + P P G PP A
Sbjct: 248 PPKGSPPLAGSGS------PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG 301
Query: 829 PPXPQPXPXTGIPVXPFP 882
P P P P P P
Sbjct: 302 SPPPPPPPRGSPPTGSLP 319
>Z71264-1|CAA95828.1| 998|Caenorhabditis elegans Hypothetical protein
K07G5.1 protein.
Length = 998
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/44 (38%), Positives = 20/44 (45%)
Frame = +1
Query: 715 PXTSLXKIRPSXSKGGQTPXGXIKXXAVSPXGXPPXAPPPXPQP 846
P TS KI S S +P + V P G PP PP P+P
Sbjct: 918 PTTSNSKIMTS-SSASDSPPPLPQRNRVGPGGAPPPLLPPKPEP 960
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.1 bits (67), Expect = 1.2
Identities = 24/75 (32%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Frame = +1
Query: 667 PVKXPGXWXFSQRPPPPXTSLXKIRPSXSKGGQTPXGXIKXXAVSPXGXPPXAPPPXPQ- 843
P P + RPPPP +S P G+TP P G P PPP P
Sbjct: 274 PPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTP---------GPPGMPGMPPPPPPSR 324
Query: 844 --PXPXTGIPVXPFP 882
P G+P P P
Sbjct: 325 FGPPGMGGMPPPPPP 339
Score = 29.1 bits (62), Expect = 4.7
Identities = 23/76 (30%), Positives = 25/76 (32%)
Frame = +1
Query: 649 PXKGQXPVKXPGXWXFSQRPPPPXTSLXKIRPSXSKGGQTPXGXIKXXAVSPXGXPPXAP 828
P P + PG PPPP S + P GG P P G PP P
Sbjct: 298 PPPPPPPGRTPGPPGMPGMPPPPPPS--RFGPP-GMGGMPPPPP--PGMRYPGGMPPPPP 352
Query: 829 PPXPQPXPXTGIPVXP 876
P P P P P
Sbjct: 353 PRYPSAGPGMYPPPPP 368
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.1 bits (67), Expect = 1.2
Identities = 24/75 (32%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Frame = +1
Query: 667 PVKXPGXWXFSQRPPPPXTSLXKIRPSXSKGGQTPXGXIKXXAVSPXGXPPXAPPPXPQ- 843
P P + RPPPP +S P G+TP P G P PPP P
Sbjct: 284 PPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTP---------GPPGMPGMPPPPPPSR 334
Query: 844 --PXPXTGIPVXPFP 882
P G+P P P
Sbjct: 335 FGPPGMGGMPPPPPP 349
Score = 29.1 bits (62), Expect = 4.7
Identities = 23/76 (30%), Positives = 25/76 (32%)
Frame = +1
Query: 649 PXKGQXPVKXPGXWXFSQRPPPPXTSLXKIRPSXSKGGQTPXGXIKXXAVSPXGXPPXAP 828
P P + PG PPPP S + P GG P P G PP P
Sbjct: 308 PPPPPPPGRTPGPPGMPGMPPPPPPS--RFGPP-GMGGMPPPPP--PGMRYPGGMPPPPP 362
Query: 829 PPXPQPXPXTGIPVXP 876
P P P P P
Sbjct: 363 PRYPSAGPGMYPPPPP 378
>AC006666-4|AAK21415.1| 109|Caenorhabditis elegans Hypothetical
protein H31G24.1 protein.
Length = 109
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +1
Query: 814 PPXAPPPXPQPXPXTGIPVXPFPLRGK 894
PP PPP PQP P P +P GK
Sbjct: 84 PPPPPPPPPQPAPAQA-PAPKYPSPGK 109
>Z83114-7|CAJ76943.1| 525|Caenorhabditis elegans Hypothetical
protein K09B11.5b protein.
Length = 525
Score = 30.3 bits (65), Expect = 2.0
Identities = 29/98 (29%), Positives = 38/98 (38%), Gaps = 1/98 (1%)
Frame = +1
Query: 595 TVIHKIRGYXRKXXLTKRPXKGQXPVKXP-GXWXFSQRPPPPXTSLXKIRPSXSKGGQTP 771
+V K G RK R KG +K P G +RP PP + + K TP
Sbjct: 421 SVERKGHGTQRKVVSVLRKDKGA--LKLPSGIATNLERPSPPSHTA---KSHTVKSPMTP 475
Query: 772 XGXIKXXAVSPXGXPPXAPPPXPQPXPXTGIPVXPFPL 885
+ P PP + PP QP P + PV P+
Sbjct: 476 PVSQPPVSQPPVSQPPVSQPPVSQP-PVSQPPVPQHPM 512
>Z83114-6|CAB63235.1| 589|Caenorhabditis elegans Hypothetical
protein K09B11.5a protein.
Length = 589
Score = 30.3 bits (65), Expect = 2.0
Identities = 29/98 (29%), Positives = 38/98 (38%), Gaps = 1/98 (1%)
Frame = +1
Query: 595 TVIHKIRGYXRKXXLTKRPXKGQXPVKXP-GXWXFSQRPPPPXTSLXKIRPSXSKGGQTP 771
+V K G RK R KG +K P G +RP PP + + K TP
Sbjct: 485 SVERKGHGTQRKVVSVLRKDKGA--LKLPSGIATNLERPSPPSHTA---KSHTVKSPMTP 539
Query: 772 XGXIKXXAVSPXGXPPXAPPPXPQPXPXTGIPVXPFPL 885
+ P PP + PP QP P + PV P+
Sbjct: 540 PVSQPPVSQPPVSQPPVSQPPVSQP-PVSQPPVPQHPM 576
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/56 (32%), Positives = 22/56 (39%)
Frame = +1
Query: 700 QRPPPPXTSLXKIRPSXSKGGQTPXGXIKXXAVSPXGXPPXAPPPXPQPXPXTGIP 867
Q PP P + I P + G P A +P PP PPP Q +G P
Sbjct: 213 QAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPP--PPPPAQLMASSGTP 266
>AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical
protein B0205.10 protein.
Length = 455
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/84 (23%), Positives = 29/84 (34%), Gaps = 4/84 (4%)
Frame = +1
Query: 643 KRPXKGQXPVKXPGXWXFSQRPPP----PXTSLXKIRPSXSKGGQTPXGXIKXXAVSPXG 810
++P PV P P P P + + P + +TP + A +P
Sbjct: 82 QQPGPAPVPVPEPAQLAPQSAPEPTPDAPAAAPVQETPQVAPAPETPAPAPETPAPAPVQ 141
Query: 811 XPPXAPPPXPQPXPXTGIPVXPFP 882
P P P+P P PV P
Sbjct: 142 ETPQVVAPAPEPTPEAAAPVPADP 165
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/56 (32%), Positives = 22/56 (39%)
Frame = +1
Query: 700 QRPPPPXTSLXKIRPSXSKGGQTPXGXIKXXAVSPXGXPPXAPPPXPQPXPXTGIP 867
Q PP P + I P + G P A +P PP PPP Q +G P
Sbjct: 199 QAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPP--PPPPAQLMASSGTP 252
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/56 (32%), Positives = 22/56 (39%)
Frame = +1
Query: 700 QRPPPPXTSLXKIRPSXSKGGQTPXGXIKXXAVSPXGXPPXAPPPXPQPXPXTGIP 867
Q PP P + I P + G P A +P PP PPP Q +G P
Sbjct: 199 QAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPP--PPPPAQLMASSGTP 252
>AC006708-23|AAF60414.1| 975|Caenorhabditis elegans Paz/piwi
domain-containing protein2 protein.
Length = 975
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = +1
Query: 766 TPXGXIKXXAVSPXGXPP-XAPPPXPQPXPXTGIPVXPFPL 885
TP + V P G PP APP P P +PV P+
Sbjct: 4 TPVPPVTMPPVPPVGFPPVTAPPGLHPPPPVPPVPVPTLPV 44
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/67 (29%), Positives = 25/67 (37%)
Frame = +1
Query: 679 PGXWXFSQRPPPPXTSLXKIRPSXSKGGQTPXGXIKXXAVSPXGXPPXAPPPXPQPXPXT 858
PG + S+ PP + PS + P G P G PP P P P +
Sbjct: 197 PGPFNPSEAPPSGGPT-GPFDPSGAPPSGGPPGPFNPSGAPPSGGPPG--PFDPSGAPPS 253
Query: 859 GIPVXPF 879
G P PF
Sbjct: 254 GGPPGPF 260
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/58 (29%), Positives = 20/58 (34%)
Frame = +1
Query: 709 PPPXTSLXKIRPSXSKGGQTPXGXIKXXAVSPXGXPPXAPPPXPQPXPXTGIPVXPFP 882
PP PS + P G P G PP P P P +G+P P P
Sbjct: 476 PPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPG--PFDPSGAPPSGMPPVPLP 531
Score = 28.3 bits (60), Expect = 8.2
Identities = 18/61 (29%), Positives = 20/61 (32%)
Frame = +1
Query: 709 PPPXTSLXKIRPSXSKGGQTPXGXIKXXAVSPXGXPPXAPPPXPQPXPXTGIPVXPFPLR 888
PP PS + P G P G PP P P P +G P PF
Sbjct: 431 PPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPG--PFNPSGAPPSGGPPGPFDPS 488
Query: 889 G 891
G
Sbjct: 489 G 489
>AL033514-8|CAA22097.2| 715|Caenorhabditis elegans Hypothetical
protein Y75B8A.8 protein.
Length = 715
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = +1
Query: 769 PXGXIKXXAVSPXGXPPXAPPPXPQPXPXTGIPVXPFPL 885
P G + A G PP PP P P P G PFP+
Sbjct: 7 PGGPMYGGAGGGGGGPPRGPPQQP-PQPQGGGVAVPFPI 44
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.5 bits (63), Expect = 3.6
Identities = 19/60 (31%), Positives = 23/60 (38%)
Frame = +1
Query: 706 PPPPXTSLXKIRPSXSKGGQTPXGXIKXXAVSPXGXPPXAPPPXPQPXPXTGIPVXPFPL 885
PPPP L + P P + +P G P PPP P P +P P PL
Sbjct: 1345 PPPPSDDLTPVPP--------PPPPPPTMSKAPTGVPLPVPPPPPLFSPSMILPPPPPPL 1396
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.1 bits (62), Expect = 4.7
Identities = 21/63 (33%), Positives = 24/63 (38%)
Frame = +1
Query: 706 PPPPXTSLXKIRPSXSKGGQTPXGXIKXXAVSPXGXPPXAPPPXPQPXPXTGIPVXPFPL 885
PPPP P GG P + P PP P P P P +G+ V P P
Sbjct: 75 PPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPP---PPMFGAPPPPPPP-SGLGVAPQPP 130
Query: 886 RGK 894
R K
Sbjct: 131 RPK 133
>Z29561-4|CAD91697.1| 498|Caenorhabditis elegans Hypothetical
protein R10E12.1d protein.
Length = 498
Score = 29.1 bits (62), Expect = 4.7
Identities = 20/61 (32%), Positives = 23/61 (37%)
Frame = +1
Query: 694 FSQRPPPPXTSLXKIRPSXSKGGQTPXGXIKXXAVSPXGXPPXAPPPXPQPXPXTGIPVX 873
F P P L K P+ + TP A SP PP PPP P P P+
Sbjct: 332 FRTLPTLPKAVLAK--PTPMQTPMTPSFRGTNAAQSPANAPPRPPPPRP-AAPSVESPIP 388
Query: 874 P 876
P
Sbjct: 389 P 389
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.1 bits (62), Expect = 4.7
Identities = 19/62 (30%), Positives = 23/62 (37%)
Frame = +1
Query: 697 SQRPPPPXTSLXKIRPSXSKGGQTPXGXIKXXAVSPXGXPPXAPPPXPQPXPXTGIPVXP 876
S PPPP + + P S + P SP PP PP P+P P P
Sbjct: 136 SSPPPPPPPRVPRTPPPRSPPPRRPP----MTPPSPQRRPPRTPP-SPEPRNPPRTPPSP 190
Query: 877 FP 882
P
Sbjct: 191 IP 192
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/56 (32%), Positives = 20/56 (35%)
Frame = +1
Query: 700 QRPPPPXTSLXKIRPSXSKGGQTPXGXIKXXAVSPXGXPPXAPPPXPQPXPXTGIP 867
+RPP P K GQ P G PP PPP P P G+P
Sbjct: 53 ERPPMPPMPFSASSLVSLKYGQ-PMPHHMGMPPPGMGPPPFMPPPIGMPPPPLGMP 107
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/56 (32%), Positives = 20/56 (35%)
Frame = +1
Query: 700 QRPPPPXTSLXKIRPSXSKGGQTPXGXIKXXAVSPXGXPPXAPPPXPQPXPXTGIP 867
+RPP P K GQ P G PP PPP P P G+P
Sbjct: 76 ERPPMPPMPFSASSLVSLKYGQ-PMPHHMGMPPPGMGPPPFMPPPIGMPPPPLGMP 130
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/56 (32%), Positives = 20/56 (35%)
Frame = +1
Query: 700 QRPPPPXTSLXKIRPSXSKGGQTPXGXIKXXAVSPXGXPPXAPPPXPQPXPXTGIP 867
+RPP P K GQ P G PP PPP P P G+P
Sbjct: 326 ERPPMPPMPFSASSLVSLKYGQ-PMPHHMGMPPPGMGPPPFMPPPIGMPPPPLGMP 380
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 808 GXPPXAPPPXPQPXPXTGIPVXPF 879
G PP PPP P P GIP F
Sbjct: 714 GYPPAPPPPGVGPPPPQGIPPMGF 737
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 25.0 bits (52), Expect(2) = 5.5
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +1
Query: 823 APPPXPQPXPXTGIPVXPFP 882
APPP P P P +P P P
Sbjct: 49 APPPPPAPYPQQAVPA-PAP 67
Score = 22.2 bits (45), Expect(2) = 5.5
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +1
Query: 814 PPXAPPPXPQP 846
PP PPP P P
Sbjct: 27 PPPPPPPKPAP 37
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +1
Query: 745 SXSKGGQTPXGXIKXXAVSPXGXPPXAPPPXPQPXPXTG 861
S G + G A +P PP PPP P P G
Sbjct: 283 SGGYAGSSGGGGYSAPAAAPPPPPPPPPPPAPAPVSSGG 321
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +1
Query: 745 SXSKGGQTPXGXIKXXAVSPXGXPPXAPPPXPQPXPXTG 861
S G + G A +P PP PPP P P G
Sbjct: 283 SGGYAGSSGGGGYSAPAAAPPPPPPPPPPPAPAPVSSGG 321
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/63 (28%), Positives = 23/63 (36%)
Frame = +1
Query: 646 RPXKGQXPVKXPGXWXFSQRPPPPXTSLXKIRPSXSKGGQTPXGXIKXXAVSPXGXPPXA 825
+P + Q P + P Q+ P P P G P +P G PP A
Sbjct: 706 QPPQPQQPPQGPPGPPGPQQHPGPYPGYPGYGPP---GAMRPPAGFAPPPGAPYGYPPGA 762
Query: 826 PPP 834
PPP
Sbjct: 763 PPP 765
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/51 (31%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Frame = +1
Query: 706 PPPPXT-SLXKIRPSXSKGGQTPXGXI-KXXAVSPXGXPPXAPPPXPQPXP 852
PPPP S + P+ S+ P + SP PP PP P P
Sbjct: 269 PPPPRIASKTSVAPTSSRAPLPPSSSFAPSISASPAPAPPPPPPQAASPYP 319
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/51 (31%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Frame = +1
Query: 706 PPPPXT-SLXKIRPSXSKGGQTPXGXI-KXXAVSPXGXPPXAPPPXPQPXP 852
PPPP S + P+ S+ P + SP PP PP P P
Sbjct: 271 PPPPRIASKTSVAPTSSRAPLPPSSSFAPSISASPAPAPPPPPPQAASPYP 321
>AL117203-6|CAB60419.1| 234|Caenorhabditis elegans Hypothetical
protein Y48C3A.9 protein.
Length = 234
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +1
Query: 706 PPPPXTSLXKIRPSXSKGGQTPXGXIKXXAVSPXGXPPXAPPPXPQPXP 852
PPP + P + GG+ G + A++P G PP A P P P P
Sbjct: 119 PPPMGMEMMGGHPG-AFGGRFAPGRMPPGAMAPGGMPPGAFPMFP-PDP 165
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = -3
Query: 870 DRDSGXRXGLGXRRGGXGGXSXGGNXXXFYXARRG 766
DR G G G R GG GG GG+ RRG
Sbjct: 202 DRRGGGGGGGGDRYGGGGGDRYGGDRYGGGGGRRG 236
>Z82062-2|CAB04890.1| 489|Caenorhabditis elegans Hypothetical
protein W02A11.3 protein.
Length = 489
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +1
Query: 793 AVSPXGXPPXAPPPXPQPXPXTGIPVXP 876
AV+ P PPP PQP +P+ P
Sbjct: 317 AVAAAAAVPQPPPPPPQPTLHAPVPIRP 344
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/46 (34%), Positives = 18/46 (39%)
Frame = +1
Query: 706 PPPPXTSLXKIRPSXSKGGQTPXGXIKXXAVSPXGXPPXAPPPXPQ 843
PPPP + I PS G + P PP PPP PQ
Sbjct: 576 PPPPSSGTRGIAPSRPLPQAPNYGTPENR---PHAVPPPPPPPPPQ 618
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/46 (34%), Positives = 18/46 (39%)
Frame = +1
Query: 706 PPPPXTSLXKIRPSXSKGGQTPXGXIKXXAVSPXGXPPXAPPPXPQ 843
PPPP + I PS G + P PP PPP PQ
Sbjct: 402 PPPPSSGTRGIAPSRPLPQAPNYGTPENR---PHAVPPPPPPPPPQ 444
>U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death
abnormality protein 6 protein.
Length = 492
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/54 (29%), Positives = 19/54 (35%)
Frame = +1
Query: 715 PXTSLXKIRPSXSKGGQTPXGXIKXXAVSPXGXPPXAPPPXPQPXPXTGIPVXP 876
P T + P S + + SP G P PPP P P PV P
Sbjct: 282 PPTEMAPTLPQISTSSNGASPSVSPASTSPSGPAPSIPPPRP-PALAPPPPVAP 334
>AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate
adaptor protein CED-6 protein.
Length = 492
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/54 (29%), Positives = 19/54 (35%)
Frame = +1
Query: 715 PXTSLXKIRPSXSKGGQTPXGXIKXXAVSPXGXPPXAPPPXPQPXPXTGIPVXP 876
P T + P S + + SP G P PPP P P PV P
Sbjct: 282 PPTEMAPTLPQISTSSNGASPSVSPASTSPSGPAPSIPPPRP-PALAPPPPVAP 334
>AF043700-5|AAB97575.2| 573|Caenorhabditis elegans Lipid depleted
protein 6 protein.
Length = 573
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/30 (46%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Frame = -3
Query: 885 KGERXDRDSGXRXGLGXR-RGGXGGXSXGG 799
+G DRD G R G G R GG G GG
Sbjct: 517 RGRSGDRDGGFRGGFGGRGGGGFRGGDRGG 546
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 28.3 bits (60), Expect = 8.2
Identities = 19/63 (30%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
Frame = +1
Query: 703 RPPPPXTSLXKIRPSXSKGGQTPXGXIKXXAVSPXGXPPXAPPPXP-QPXPXTGIPVXPF 879
RP P + +P Q I+ A++ P PPP P QP P IP P
Sbjct: 2032 RPQPQPRPQPQPQPQPQPQPQPQQPYIQRPALTLPFQQPQYPPPIPFQPRPAPFIPFQPM 2091
Query: 880 PLR 888
R
Sbjct: 2092 VQR 2094
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,091,889
Number of Sequences: 27780
Number of extensions: 146706
Number of successful extensions: 1540
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1279
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2370744068
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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