Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP13_F_K23
(902 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 compon... 43 5e-05
SPCC1259.09c |||pyruvate dehydrogenase protein x component|Schiz... 34 0.032
SPCC794.07 |||dihydrolipoamide S-acetyltransferase E2 |Schizosac... 33 0.056
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 31 0.22
SPCC1259.07 |||transcriptional regulatory protein Rxt3 |Schizosa... 29 0.90
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 29 0.90
SPBC24C6.08c |||vesicle coat protein|Schizosaccharomyces pombe|c... 27 2.8
SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|ch... 27 2.8
SPAC823.05c |tlg2||SNARE Tlg2|Schizosaccharomyces pombe|chr 1|||... 27 3.6
SPBC359.06 |mug14||adducin|Schizosaccharomyces pombe|chr 2|||Manual 27 4.8
SPAC11E3.02c |||C2 domain protein|Schizosaccharomyces pombe|chr ... 27 4.8
SPAC12G12.06c |||RNA 3'-terminal phosphate cyclase |Schizosaccha... 27 4.8
SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1 type|Schizosaccharom... 26 6.4
SPCC737.03c |||conserved eukaryotic protein|Schizosaccharomyces ... 26 8.4
SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 8.4
SPBC336.03 |efc25||exchange factor Cdc25p-like|Schizosaccharomyc... 26 8.4
SPBC16E9.11c |pub3||ubiquitin-protein ligase E3|Schizosaccharomy... 26 8.4
>SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 component
of oxoglutarate dehydrogenase complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 452
Score = 43.2 bits (97), Expect = 5e-05
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = +2
Query: 581 VTTPSFPDSVSEGDV-KLDKKVGDSVAADEVVLEIETDKTAIPVMAPGHG 727
+ TP FP+S++EG + + K+ G+ V DE + +ETDK PV AP G
Sbjct: 45 IKTPPFPESITEGTLAQWLKQPGEYVNKDEEIASVETDKIDAPVTAPDAG 94
>SPCC1259.09c |||pyruvate dehydrogenase protein x
component|Schizosaccharomyces pombe|chr 3|||Manual
Length = 456
Score = 33.9 bits (74), Expect = 0.032
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +2
Query: 590 PSFPDSVSEGDV-KLDKKVGDSVAADEVVLEIETDKTAIPVMAPGHG 727
P+ ++ EG++ K K GDS + +++LE+ETDK + V +G
Sbjct: 41 PALSPTMEEGNITKWHFKEGDSFKSGDILLEVETDKATMDVEVQDNG 87
>SPCC794.07 |||dihydrolipoamide S-acetyltransferase E2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 483
Score = 33.1 bits (72), Expect = 0.056
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +2
Query: 581 VTTPSFPDSVSEGDV-KLDKKVGDSVAADEVVLEIETDKTAI 703
+ P+ +++ G++ KK+GD + +V+ EIETDK I
Sbjct: 56 INMPALSPTMTTGNIGAFQKKIGDKIEPGDVLCEIETDKAQI 97
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 31.1 bits (67), Expect = 0.22
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Frame = -3
Query: 723 WPGAMTGMAVL-----SVSISRTTSSAATLSPTFLSNLTSPSETESGKLGVVTSCSTS 565
W +TG VL S S+S TTSS+++ SP+ S T+ S + S +S S+S
Sbjct: 113 WSVYLTGNGVLQTTVSSSSVSSTTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSS 170
>SPCC1259.07 |||transcriptional regulatory protein Rxt3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 351
Score = 29.1 bits (62), Expect = 0.90
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 468 QNTCTLTRNQTEPTESSGRPQSSSIHP 548
+NT ++ R +T PT+SSG ++ HP
Sbjct: 106 ENTSSVKRQKTLPTQSSGEEEAKYSHP 132
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 29.1 bits (62), Expect = 0.90
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = -3
Query: 708 TGMAVLSVSISRTTSSAATLSPTFLSNLTSPSET 607
T +++ S S S T SSA+T SP+ +S+ S S T
Sbjct: 590 TSLSISSSSTSSTFSSASTSSPSSISSSISSSST 623
Score = 25.8 bits (54), Expect = 8.4
Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Frame = -3
Query: 681 ISRTTSSAATLSPTFLSNLTS--PSETESGKLGVVTSCST 568
+S TSS+A +S T +SN++S PS T S + +T+ ST
Sbjct: 751 LSSITSSSAIVSSTTVSNISSNLPSATASSQ-SQLTNSST 789
>SPBC24C6.08c |||vesicle coat protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 367
Score = 27.5 bits (58), Expect = 2.8
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +2
Query: 353 LRVSTFNKRKCYDAARS--TSRRCTGVRASPSASSQQL 460
LR+S+FN + Y ++RS T+ G ASPS + L
Sbjct: 252 LRISSFNTKNDYSSSRSKTTASSSNGTFASPSFNISSL 289
>SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 867
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/58 (22%), Positives = 27/58 (46%)
Frame = +3
Query: 363 VRSISENATTLLEAHPDAVPASGPVHPLQVNNSNAQNTCTLTRNQTEPTESSGRPQSS 536
V ++ N+ L ++ +VP+ HP+ +N S + + + P +S Q+S
Sbjct: 349 VTTVPSNSPATLNSYTTSVPSGMSRHPMLMNPSTPEPSLGVNSPSLRPLQSLNNVQNS 406
>SPAC823.05c |tlg2||SNARE Tlg2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 301
Score = 27.1 bits (57), Expect = 3.6
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -3
Query: 702 MAVLSVSISRTTSSAATLSPTFLSNLTSPSETESGK 595
+ V + T S A ++ FLSNL S +TES +
Sbjct: 119 LQVTKAQTNSATGSEALMAKNFLSNLASRIQTESAQ 154
>SPBC359.06 |mug14||adducin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 257
Score = 26.6 bits (56), Expect = 4.8
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = -2
Query: 682 DFQD-HFIGGYAVSHFLI*FDVTFRNGVRETWSGHILLYKPGDS*SGWM 539
+F+D H + ++H F + RNG E +GH+ + P D + W+
Sbjct: 9 EFEDLHTKRKWMLNHMAAAFRMFGRNGYNEGTAGHVTVRDPIDENTFWI 57
>SPAC11E3.02c |||C2 domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1237
Score = 26.6 bits (56), Expect = 4.8
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +2
Query: 29 REFLKILTLAFEFLTSGDQPEF 94
++F+K L+LA E ++ G +PE+
Sbjct: 85 KDFIKYLSLALESISMGKEPEY 106
>SPAC12G12.06c |||RNA 3'-terminal phosphate cyclase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 363
Score = 26.6 bits (56), Expect = 4.8
Identities = 18/75 (24%), Positives = 37/75 (49%)
Frame = -2
Query: 751 LTYNSLMTXMAGRHDRNGGFVRLDFQDHFIGGYAVSHFLI*FDVTFRNGVRETWSGHILL 572
LT+ ++ ++G R G + D D + Y VS + +T + + +++G +
Sbjct: 15 LTHRLVLATLSGTPIRVEG-IYPDEADPGVKDYQVSFLRLLEKLTNGSVIEISYTGTSFI 73
Query: 571 YKPGDS*SGWMLLDC 527
Y+PG+ G ++ DC
Sbjct: 74 YRPGNIIGGRVVHDC 88
>SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 26.2 bits (55), Expect = 6.4
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +3
Query: 699 PFRSWRPAMXVIKELYVKDGETVKAGQ 779
PFR W + +KE++ ++ V+ GQ
Sbjct: 99 PFREWVGELSFVKEMFREEDSAVEQGQ 125
>SPCC737.03c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 615
Score = 25.8 bits (54), Expect = 8.4
Identities = 19/66 (28%), Positives = 28/66 (42%)
Frame = +3
Query: 366 RSISENATTLLEAHPDAVPASGPVHPLQVNNSNAQNTCTLTRNQTEPTESSGRPQSSSIH 545
R+ E+ T L+ A+P S PV P+ QN+ ++ P E G + SIH
Sbjct: 417 RAPEESPMTFLQKKMAALPTSSPVRPMLKPTLQLQNS---PLSKLVPQE-VGNKVNDSIH 472
Query: 546 PLHESP 563
P
Sbjct: 473 TTSNQP 478
>SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 262
Score = 25.8 bits (54), Expect = 8.4
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 395 ARSTSRRCTGVRASPSASSQQLKRPKYLHP-YTQPN 499
A +S T ASP+ +Q +P Y P Y+QP+
Sbjct: 71 AGGSSTGSTPRTASPAVGNQDYSKPSYSQPSYSQPS 106
>SPBC336.03 |efc25||exchange factor Cdc25p-like|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 987
Score = 25.8 bits (54), Expect = 8.4
Identities = 16/51 (31%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +3
Query: 396 LEAHPDAVPASG-PVHPLQVNNSNAQNTCTLTRNQTEPTESSGRPQSSSIH 545
++A ++P SG + P++ N+S++ + + N TESS RP SS ++
Sbjct: 145 MQASVHSLPLSGCSIGPVRTNHSSSLSNSS---NSLLQTESSLRPNSSFVN 192
>SPBC16E9.11c |pub3||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 786
Score = 25.8 bits (54), Expect = 8.4
Identities = 17/64 (26%), Positives = 23/64 (35%)
Frame = +3
Query: 369 SISENATTLLEAHPDAVPASGPVHPLQVNNSNAQNTCTLTRNQTEPTESSGRPQSSSIHP 548
S + N TT A P N++ Q+T TRN T S+G +
Sbjct: 143 STTANRTTSTPTTTTARTTRTTPRPTATTNTSNQSTSNSTRNGTSAATSNGTGTGAGTGA 202
Query: 549 LHES 560
H S
Sbjct: 203 SHRS 206
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,470,381
Number of Sequences: 5004
Number of extensions: 73136
Number of successful extensions: 222
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 222
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 456499320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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