Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP13_F_K23
         (902 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF047653-6|AAC04462.2|  463|Caenorhabditis elegans Hypothetical ...    55   6e-08
U41994-9|AAK31523.1|  786|Caenorhabditis elegans Hypothetical pr...    32   0.65 
Z77659-4|CAB01163.1|  507|Caenorhabditis elegans Hypothetical pr...    30   2.6  
AF106584-6|AAC78220.1|  424|Caenorhabditis elegans Hypothetical ...    28   7.9  

>AF047653-6|AAC04462.2|  463|Caenorhabditis elegans Hypothetical
           protein W02F12.5 protein.
          Length = 463

 Score = 55.2 bits (127), Expect = 6e-08
 Identities = 26/49 (53%), Positives = 35/49 (71%)
 Frame = +2

Query: 581 VTTPSFPDSVSEGDVKLDKKVGDSVAADEVVLEIETDKTAIPVMAPGHG 727
           V  P+F +S+SEGD++  K+ GD V  DE+V EIETDKT++ V AP  G
Sbjct: 66  VEGPAFAESISEGDIRWLKQKGDHVNEDELVAEIETDKTSVEVPAPQAG 114


>U41994-9|AAK31523.1|  786|Caenorhabditis elegans Hypothetical
           protein F59A6.3 protein.
          Length = 786

 Score = 31.9 bits (69), Expect = 0.65
 Identities = 17/56 (30%), Positives = 30/56 (53%)
 Frame = -3

Query: 726 PWPGAMTGMAVLSVSISRTTSSAATLSPTFLSNLTSPSETESGKLGVVTSCSTSQG 559
           P P  ++G++  + S   TTS  +T S + +S+ + PS T      + T+ ST+ G
Sbjct: 399 PGPSTISGISQSTTSGPTTTSEPSTTSGSTVSDTSGPSTTSGPSTTLGTTQSTTSG 454


>Z77659-4|CAB01163.1|  507|Caenorhabditis elegans Hypothetical
           protein F23B12.5 protein.
          Length = 507

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = +2

Query: 581 VTTPSFPDSVSEGDV-KLDKKVGDSVAADEVVLEIETDKTAIPVMAPGHG 727
           V  P+   ++  G V    KK GD ++  +++ EIETDK  +    P  G
Sbjct: 80  VALPALSPTMELGTVVSWQKKEGDQLSEGDLLCEIETDKATMGFETPEEG 129


>AF106584-6|AAC78220.1|  424|Caenorhabditis elegans Hypothetical
           protein F54A5.1 protein.
          Length = 424

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = +3

Query: 495 QTEPTESSGRPQSSSIHPLHESPGL*SKM*PLQVSRTPFLKVTS 626
           QT PT     PQSS+     E P   +   P++  RTP  ++T+
Sbjct: 70  QTVPTPVKSEPQSSNCSSPFEHPICSNAPRPIRSQRTPMKEITT 113


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,176,030
Number of Sequences: 27780
Number of extensions: 412152
Number of successful extensions: 1255
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1083
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1254
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)